RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 WDR62O43379 1518 aa16.07■□□□□ 0.16
DNMT3A-202ENST00000321117 NUP153P49790 1475 aaKnown RBP16.06■□□□□ 0.16
DNMT3A-202ENST00000321117 DUSP27Q5VZP5 1158 aa16.06■□□□□ 0.16
DNMT3A-202ENST00000321117 CASC1Q6TDU7 716 aa16.05■□□□□ 0.16
DNMT3A-202ENST00000321117 AAMPQ13685 434 aa16.05■□□□□ 0.16
DNMT3A-202ENST00000321117 ARHGAP5Q13017 1502 aa16.05■□□□□ 0.16
DNMT3A-202ENST00000321117 KDM6BO15054 1643 aa16.05■□□□□ 0.16
DNMT3A-202ENST00000321117 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
DNMT3A-202ENST00000321117 DNMT1P26358 1616 aaKnown RBP16.04■□□□□ 0.16
DNMT3A-202ENST00000321117 MAGI1Q96QZ7 1491 aaPredicted RBP16.04■□□□□ 0.16
DNMT3A-202ENST00000321117 DISP3Q9P2K9 1392 aa16.03■□□□□ 0.16
DNMT3A-202ENST00000321117 CHMP5Q9NZZ3 219 aa16.03■□□□□ 0.16
DNMT3A-202ENST00000321117 STK26Q9P289 416 aa16.03■□□□□ 0.16
DNMT3A-202ENST00000321117 DDX11L8A8MPP1 907 aa16.03■□□□□ 0.16
DNMT3A-202ENST00000321117 DZIP1LQ8IYY4 767 aaKnown RBP16.03■□□□□ 0.16
DNMT3A-202ENST00000321117 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
DNMT3A-202ENST00000321117 PRKCSHP14314 528 aaPredicted RBP16.02■□□□□ 0.16
DNMT3A-202ENST00000321117 TCP11L2Q8N4U5 519 aa16.02■□□□□ 0.16
DNMT3A-202ENST00000321117 PTMSP20962 102 aa16.02■□□□□ 0.15
DNMT3A-202ENST00000321117 CFAP70Q5T0N1 1121 aa16.02■□□□□ 0.15
DNMT3A-202ENST00000321117 GRIN2AQ12879 1464 aa16.01■□□□□ 0.15
DNMT3A-202ENST00000321117 RAPGEF6Q8TEU7 1601 aa16.01■□□□□ 0.15
DNMT3A-202ENST00000321117 KIF21AQ7Z4S6 1674 aa16.01■□□□□ 0.15
DNMT3A-202ENST00000321117 PDZRN3Q9UPQ7 1066 aa16.01■□□□□ 0.15
DNMT3A-202ENST00000321117 C22orf23Q9BZE7 217 aa16■□□□□ 0.15
DNMT3A-202ENST00000321117 DDX19BQ9UMR2 479 aa15.99■□□□□ 0.15
DNMT3A-202ENST00000321117 UHRF1BP1Q6BDS2 1440 aa15.99■□□□□ 0.15
DNMT3A-202ENST00000321117 MSNP26038 577 aaKnown RBP15.99■□□□□ 0.15
DNMT3A-202ENST00000321117 FOXD4L1Q9NU39 408 aa15.99■□□□□ 0.15
DNMT3A-202ENST00000321117 ARHGEF12Q9NZN5 1544 aa15.99■□□□□ 0.15
DNMT3A-202ENST00000321117 PER1O15534 1290 aaPredicted RBP15.99■□□□□ 0.15
DNMT3A-202ENST00000321117 FAM43AQ8N2R8 423 aa15.99■□□□□ 0.15
DNMT3A-202ENST00000321117 KIF14Q15058 1648 aa15.99■□□□□ 0.15
DNMT3A-202ENST00000321117 NINLQ9Y2I6 1382 aa15.98■□□□□ 0.15
DNMT3A-202ENST00000321117 PTMAP06454 111 aaKnown RBP15.98■□□□□ 0.15
DNMT3A-202ENST00000321117 HDGFL2Q7Z4V5 671 aaPredicted RBP15.98■□□□□ 0.15
DNMT3A-202ENST00000321117 ITSN2Q9NZM3 1697 aa15.98■□□□□ 0.15
DNMT3A-202ENST00000321117 ZNF608Q9ULD9 1512 aaPredicted RBP15.97■□□□□ 0.15
DNMT3A-202ENST00000321117 ABCA5Q8WWZ7 1642 aa15.97■□□□□ 0.15
DNMT3A-202ENST00000321117 PRAG1Q86YV5 1406 aa15.97■□□□□ 0.15
DNMT3A-202ENST00000321117 MTHFSP49914 203 aa15.97■□□□□ 0.15
DNMT3A-202ENST00000321117 CFAP44Q96MT7 982 aa15.97■□□□□ 0.15
DNMT3A-202ENST00000321117 NUTM2DQ5VT03 806 aaPredicted RBP15.97■□□□□ 0.15
DNMT3A-202ENST00000321117 ESF1Q9H501 851 aaKnown RBP15.96■□□□□ 0.15
DNMT3A-202ENST00000321117 NKTRP30414 1462 aaKnown RBP15.96■□□□□ 0.15
DNMT3A-202ENST00000321117 TERF2IPQ9NYB0 399 aa15.96■□□□□ 0.15
DNMT3A-202ENST00000321117 AFAP1Q8N556 730 aa15.96■□□□□ 0.14
DNMT3A-202ENST00000321117 CALD1Q05682 793 aaKnown RBP15.95■□□□□ 0.14
DNMT3A-202ENST00000321117 TESK2Q96S53 571 aa15.95■□□□□ 0.14
DNMT3A-202ENST00000321117 SCAPERQ9BY12 1400 aa15.95■□□□□ 0.14
DNMT3A-202ENST00000321117 KDM5BQ9UGL1 1544 aa15.95■□□□□ 0.14
DNMT3A-202ENST00000321117 WWC1Q8IX03 1113 aa15.95■□□□□ 0.14
DNMT3A-202ENST00000321117 EVC2Q86UK5 1308 aa15.95■□□□□ 0.14
DNMT3A-202ENST00000321117 C8orf34Q49A92 452 aa15.94■□□□□ 0.14
DNMT3A-202ENST00000321117 ANKRD45Q5TZF3 282 aa15.94■□□□□ 0.14
DNMT3A-202ENST00000321117 KIAA0556O60303 1618 aa15.93■□□□□ 0.14
DNMT3A-202ENST00000321117 ADAMTS12P58397 1594 aa15.93■□□□□ 0.14
DNMT3A-202ENST00000321117 APBB1O00213 710 aa15.92■□□□□ 0.14
DNMT3A-202ENST00000321117 TRAK2O60296 914 aa15.92■□□□□ 0.14
DNMT3A-202ENST00000321117 DENND4BO75064 1496 aaPredicted RBP15.92■□□□□ 0.14
DNMT3A-202ENST00000321117 SKOR2Q2VWA4 1001 aaPredicted RBP15.91■□□□□ 0.14
DNMT3A-202ENST00000321117 LNPKQ9C0E8 428 aa15.91■□□□□ 0.14
DNMT3A-202ENST00000321117 ADGRL2O95490 1459 aa15.91■□□□□ 0.14
DNMT3A-202ENST00000321117 SLC12A5Q9H2X9 1139 aa15.91■□□□□ 0.14
DNMT3A-202ENST00000321117 DNTTIP2Q5QJE6 756 aaKnown RBP15.91■□□□□ 0.14
DNMT3A-202ENST00000321117 WDR63Q8IWG1 891 aa15.91■□□□□ 0.14
DNMT3A-202ENST00000321117 IGHDP01880 384 aa15.9■□□□□ 0.14
DNMT3A-202ENST00000321117 MRE11P49959 708 aa15.9■□□□□ 0.14
DNMT3A-202ENST00000321117 AMER1Q5JTC6 1135 aaPredicted RBP15.9■□□□□ 0.14
DNMT3A-202ENST00000321117 PLEKHH1Q9ULM0 1364 aa15.9■□□□□ 0.14
DNMT3A-202ENST00000321117 HSP90AA2PQ14568 343 aaPredicted RBP15.9■□□□□ 0.14
DNMT3A-202ENST00000321117 HAP1P54257 671 aaPredicted RBP15.89■□□□□ 0.13
DNMT3A-202ENST00000321117 RIPK4P57078 832 aa15.89■□□□□ 0.13
DNMT3A-202ENST00000321117 KIF16BQ96L93 1317 aa15.89■□□□□ 0.13
DNMT3A-202ENST00000321117 DDX49Q9Y6V7 483 aaKnown RBP15.89■□□□□ 0.13
DNMT3A-202ENST00000321117 ELL2O00472 640 aaPredicted RBP15.88■□□□□ 0.13
DNMT3A-202ENST00000321117 TMEM132EQ6IEE7 984 aa15.88■□□□□ 0.13
DNMT3A-202ENST00000321117 RARSP54136 660 aaKnown RBP15.88■□□□□ 0.13
DNMT3A-202ENST00000321117 MVPQ14764 893 aaKnown RBP15.88■□□□□ 0.13
DNMT3A-202ENST00000321117 TPRNQ4KMQ1 711 aa15.88■□□□□ 0.13
DNMT3A-202ENST00000321117 FAM135AQ9P2D6 1515 aa15.88■□□□□ 0.13
DNMT3A-202ENST00000321117 MCM4P33991 863 aa15.88■□□□□ 0.13
DNMT3A-202ENST00000321117 EXOSC9Q06265 439 aaKnown RBP15.88■□□□□ 0.13
DNMT3A-202ENST00000321117 VGFO15240 615 aaPredicted RBP15.87■□□□□ 0.13
DNMT3A-202ENST00000321117 TSR2Q969E8 191 aaKnown RBP15.87■□□□□ 0.13
DNMT3A-202ENST00000321117 DISP1Q96F81 1524 aa15.87■□□□□ 0.13
DNMT3A-202ENST00000321117 COL17A1Q9UMD9 1497 aaPredicted RBP15.87■□□□□ 0.13
DNMT3A-202ENST00000321117 KDM2BQ8NHM5 1336 aa15.86■□□□□ 0.13
DNMT3A-202ENST00000321117 KDM5CP41229 1560 aa15.86■□□□□ 0.13
DNMT3A-202ENST00000321117 ATP10BO94823 1461 aa15.86■□□□□ 0.13
DNMT3A-202ENST00000321117 SHANK2Q9UPX8 1470 aa15.86■□□□□ 0.13
DNMT3A-202ENST00000321117 DIAPH1O60610 1272 aaKnown RBP15.85■□□□□ 0.13
DNMT3A-202ENST00000321117 SCAF11Q99590 1463 aaKnown RBP15.85■□□□□ 0.13
DNMT3A-202ENST00000321117 GGNBP2Q9H3C7 697 aa15.84■□□□□ 0.13
DNMT3A-202ENST00000321117 TBC1D2Q9BYX2 928 aa15.84■□□□□ 0.13
DNMT3A-202ENST00000321117 NUP160Q12769 1436 aa15.84■□□□□ 0.13
DNMT3A-202ENST00000321117 MCCP23508 829 aa15.84■□□□□ 0.13
DNMT3A-202ENST00000321117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.84■□□□□ 0.13
DNMT3A-202ENST00000321117 BLMP54132 1417 aaPredicted RBP15.83■□□□□ 0.12
DNMT3A-202ENST00000321117 INSRP06213 1382 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 186.6 ms