RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 EFCAB2Q5VUJ9 269 aa5.06□□□□□ -1.6
SCAMP1-201ENST00000320280 P3H3Q8IVL6 736 aa5.06□□□□□ -1.6
SCAMP1-201ENST00000320280 RNF25Q96BH1 459 aaPredicted RBP5.06□□□□□ -1.6
SCAMP1-201ENST00000320280 ATP7AQ04656 1500 aa5.06□□□□□ -1.6
SCAMP1-201ENST00000320280 DUOX2Q9NRD8 1548 aa5.06□□□□□ -1.6
SCAMP1-201ENST00000320280 MBD5Q9P267 1494 aa5.06□□□□□ -1.6
SCAMP1-201ENST00000320280 ST18O60284 1047 aa5.06□□□□□ -1.6
SCAMP1-201ENST00000320280 IER5LQ5T953 404 aa5.06□□□□□ -1.6
SCAMP1-201ENST00000320280 KIDINS220Q9ULH0 1771 aa5.06□□□□□ -1.6
SCAMP1-201ENST00000320280 BCL11BQ9C0K0 894 aaPredicted RBP5.06□□□□□ -1.6
SCAMP1-201ENST00000320280 UNC13BO14795 1591 aa5.06□□□□□ -1.6
SCAMP1-201ENST00000320280 TSPOAP1O95153 1857 aa5.06□□□□□ -1.6
SCAMP1-201ENST00000320280 SYCP2Q9BX26 1530 aa5.05□□□□□ -1.6
SCAMP1-201ENST00000320280 KDM5DQ9BY66 1539 aa5.05□□□□□ -1.6
SCAMP1-201ENST00000320280 ERBINQ96RT1 1412 aa5.05□□□□□ -1.6
SCAMP1-201ENST00000320280 PDCD7Q8N8D1 485 aaKnown RBP5.05□□□□□ -1.6
SCAMP1-201ENST00000320280 FAM205CA6NFA0 338 aa5.05□□□□□ -1.6
SCAMP1-201ENST00000320280 DIP2CQ9Y2E4 1556 aa5.04□□□□□ -1.6
SCAMP1-201ENST00000320280 DAPK1P53355 1430 aa5.04□□□□□ -1.6
SCAMP1-201ENST00000320280 HRCP23327 699 aa5.04□□□□□ -1.6
SCAMP1-201ENST00000320280 LCE2DQ5TA82 110 aaPredicted RBP5.04□□□□□ -1.6
SCAMP1-201ENST00000320280 PHF8Q9UPP1 1060 aa5.04□□□□□ -1.6
SCAMP1-201ENST00000320280 ABCA6Q8N139 1617 aa5.04□□□□□ -1.6
SCAMP1-201ENST00000320280 LMTK2Q8IWU2 1503 aa5.03□□□□□ -1.6
SCAMP1-201ENST00000320280 PRDM15P57071 1507 aaPredicted RBP5.03□□□□□ -1.6
SCAMP1-201ENST00000320280 CDAN1Q8IWY9 1227 aa5.03□□□□□ -1.6
SCAMP1-201ENST00000320280 C9orf84Q5VXU9 1444 aa5.03□□□□□ -1.6
SCAMP1-201ENST00000320280 KDM5AP29375 1690 aaKnown RBP5.03□□□□□ -1.6
SCAMP1-201ENST00000320280 ZNF710Q8N1W2 664 aa5.03□□□□□ -1.6
SCAMP1-201ENST00000320280 NEURL4Q96JN8 1562 aa5.03□□□□□ -1.6
SCAMP1-201ENST00000320280 VWDEQ8N2E2 1590 aa5.02□□□□□ -1.61
SCAMP1-201ENST00000320280 IQGAP3Q86VI3 1631 aa5.02□□□□□ -1.61
SCAMP1-201ENST00000320280 RIOK3O14730 519 aaKnown RBP5.02□□□□□ -1.61
SCAMP1-201ENST00000320280 EMP3P54852 163 aa5.02□□□□□ -1.61
SCAMP1-201ENST00000320280 CFDP1Q9UEE9 299 aaPredicted RBP5.02□□□□□ -1.61
SCAMP1-201ENST00000320280 HFM1A2PYH4 1435 aa5.01□□□□□ -1.61
SCAMP1-201ENST00000320280 ABCC5O15440 1437 aa5.01□□□□□ -1.61
SCAMP1-201ENST00000320280 SCAPERQ9BY12 1400 aa5.01□□□□□ -1.61
SCAMP1-201ENST00000320280 ATP10AO60312 1499 aa5.01□□□□□ -1.61
SCAMP1-201ENST00000320280 ARHGEF12Q9NZN5 1544 aa5.01□□□□□ -1.61
SCAMP1-201ENST00000320280 FAM69CQ0P6D2 419 aa5.01□□□□□ -1.61
SCAMP1-201ENST00000320280 BOLA1Q9Y3E2 137 aa5.01□□□□□ -1.61
SCAMP1-201ENST00000320280 ANKRD30AQ9BXX3 1397 aa5.01□□□□□ -1.61
SCAMP1-201ENST00000320280 RGL2O15211 777 aa5.01□□□□□ -1.61
SCAMP1-201ENST00000320280 L3MBTL3Q96JM7 780 aaPredicted RBP5.01□□□□□ -1.61
SCAMP1-201ENST00000320280 TET3O43151 1660 aa5.01□□□□□ -1.61
SCAMP1-201ENST00000320280 CNTLNQ9NXG0 1405 aa5□□□□□ -1.61
SCAMP1-201ENST00000320280 KANK4Q5T7N3 995 aaPredicted RBP5□□□□□ -1.61
SCAMP1-201ENST00000320280 RPRD2Q5VT52 1461 aaKnown RBP5□□□□□ -1.61
SCAMP1-201ENST00000320280 ADAMTSL3P82987 1691 aa4.99□□□□□ -1.61
SCAMP1-201ENST00000320280 A2MP01023 1474 aa4.99□□□□□ -1.61
SCAMP1-201ENST00000320280 NCOA1Q15788 1441 aa4.99□□□□□ -1.61
SCAMP1-201ENST00000320280 RANGAP1P46060 587 aaPredicted RBP4.99□□□□□ -1.61
SCAMP1-201ENST00000320280 ATP1B4Q9UN42 357 aaPredicted RBP4.99□□□□□ -1.61
SCAMP1-201ENST00000320280 MROH1Q8NDA8 1641 aa4.98□□□□□ -1.61
SCAMP1-201ENST00000320280 FER1L4A9Z1Z3 1794 aa4.98□□□□□ -1.61
SCAMP1-201ENST00000320280 DHX29Q7Z478 1369 aaKnown RBP4.98□□□□□ -1.61
SCAMP1-201ENST00000320280 TRAPPC8Q9Y2L5 1435 aa4.98□□□□□ -1.61
SCAMP1-201ENST00000320280 ARHGAP31Q2M1Z3 1444 aa4.98□□□□□ -1.61
SCAMP1-201ENST00000320280 CAMSAP1Q5T5Y3 1602 aa4.97□□□□□ -1.61
SCAMP1-201ENST00000320280 CHGAP10645 457 aaKnown RBP4.97□□□□□ -1.61
SCAMP1-201ENST00000320280 CHRM1P11229 460 aaPredicted RBP4.97□□□□□ -1.61
SCAMP1-201ENST00000320280 ZNF142P52746 1687 aaPredicted RBP4.97□□□□□ -1.61
SCAMP1-201ENST00000320280 VGFO15240 615 aaPredicted RBP4.97□□□□□ -1.61
SCAMP1-201ENST00000320280 TSPY4P0CV99 314 aa4.97□□□□□ -1.61
SCAMP1-201ENST00000320280 TSPY10P0CW01 314 aa4.97□□□□□ -1.61
SCAMP1-201ENST00000320280 SPAG9O60271 1321 aaKnown RBP4.97□□□□□ -1.61
SCAMP1-201ENST00000320280 EFCAB6Q5THR3 1501 aa4.96□□□□□ -1.62
SCAMP1-201ENST00000320280 TRIM26Q12899 539 aaPredicted RBP4.96□□□□□ -1.62
SCAMP1-201ENST00000320280 KCNH8Q96L42 1107 aa4.96□□□□□ -1.62
SCAMP1-201ENST00000320280 NAIPQ13075 1403 aa4.96□□□□□ -1.62
SCAMP1-201ENST00000320280 SPHKAPQ2M3C7 1700 aa4.96□□□□□ -1.62
SCAMP1-201ENST00000320280 CLSPNQ9HAW4 1339 aa4.95□□□□□ -1.62
SCAMP1-201ENST00000320280 KIF15Q9NS87 1388 aa4.95□□□□□ -1.62
SCAMP1-201ENST00000320280 SNPHO15079 494 aa4.95□□□□□ -1.62
SCAMP1-201ENST00000320280 NPATQ14207 1427 aa4.95□□□□□ -1.62
SCAMP1-201ENST00000320280 SETD5Q9C0A6 1442 aa4.95□□□□□ -1.62
SCAMP1-201ENST00000320280 ANKRD50Q9ULJ7 1429 aa4.95□□□□□ -1.62
SCAMP1-201ENST00000320280 MICALL2Q8IY33 904 aa4.95□□□□□ -1.62
SCAMP1-201ENST00000320280 TTBK1Q5TCY1 1321 aaPredicted RBP4.95□□□□□ -1.62
SCAMP1-201ENST00000320280 CEP152O94986 1710 aa4.95□□□□□ -1.62
SCAMP1-201ENST00000320280 KANK1Q14678 1352 aa4.95□□□□□ -1.62
SCAMP1-201ENST00000320280 PKD2Q13563 968 aa4.94□□□□□ -1.62
SCAMP1-201ENST00000320280 SPATA31D1Q6ZQQ2 1576 aa4.94□□□□□ -1.62
SCAMP1-201ENST00000320280 COL17A1Q9UMD9 1497 aaPredicted RBP4.94□□□□□ -1.62
SCAMP1-201ENST00000320280 PIK3C2BO00750 1634 aa4.94□□□□□ -1.62
SCAMP1-201ENST00000320280 ABCC3O15438 1527 aa4.94□□□□□ -1.62
SCAMP1-201ENST00000320280 KHSRPQ92945 711 aaKnown RBP eCLIP4.94□□□□□ -1.622e-6■■□□□ 11.7
SCAMP1-201ENST00000320280 ERBB3P21860 1342 aa4.94□□□□□ -1.62
SCAMP1-201ENST00000320280 PREX1Q8TCU6 1659 aa4.94□□□□□ -1.62
SCAMP1-201ENST00000320280 TMEM92Q6UXU6 159 aa4.93□□□□□ -1.62
SCAMP1-201ENST00000320280 HS3ST6Q96QI5 342 aa4.93□□□□□ -1.62
SCAMP1-201ENST00000320280 PZPP20742 1482 aa4.93□□□□□ -1.62
SCAMP1-201ENST00000320280 CLTCQ00610 1675 aaKnown RBP4.93□□□□□ -1.62
SCAMP1-201ENST00000320280 SIGLEC1Q9BZZ2 1709 aa4.93□□□□□ -1.62
SCAMP1-201ENST00000320280 TRPM2O94759 1503 aa4.93□□□□□ -1.62
SCAMP1-201ENST00000320280 MS4A4AQ96JQ5 239 aa4.93□□□□□ -1.62
SCAMP1-201ENST00000320280 E9PCH4 1651 aa4.93□□□□□ -1.62
SCAMP1-201ENST00000320280 C3P01024 1663 aa4.93□□□□□ -1.62
SCAMP1-201ENST00000320280 PTPRKQ15262 1439 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms