RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 RICTORQ6R327 1708 aa12.79□□□□□ -0.36
RBFOX1-201ENST00000311745 MAP3K4Q9Y6R4 1608 aa12.79□□□□□ -0.36
RBFOX1-201ENST00000311745 ZNF326Q5BKZ1 582 aaKnown RBP12.79□□□□□ -0.36
RBFOX1-201ENST00000311745 TESK2Q96S53 571 aa12.79□□□□□ -0.36
RBFOX1-201ENST00000311745 SCAPERQ9BY12 1400 aa12.79□□□□□ -0.36
RBFOX1-201ENST00000311745 HSP90AA2PQ14568 343 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-201ENST00000311745 KDM2AQ9Y2K7 1162 aa12.78□□□□□ -0.36
RBFOX1-201ENST00000311745 ROCK2O75116 1388 aaKnown RBP12.78□□□□□ -0.36
RBFOX1-201ENST00000311745 DISP3Q9P2K9 1392 aa12.78□□□□□ -0.36
RBFOX1-201ENST00000311745 SPAG9O60271 1321 aaKnown RBP12.78□□□□□ -0.36
RBFOX1-201ENST00000311745 TAF7LQ5H9L4 462 aa12.78□□□□□ -0.36
RBFOX1-201ENST00000311745 CARD11Q9BXL7 1154 aa12.78□□□□□ -0.36
RBFOX1-201ENST00000311745 KIF1BO60333 1816 aa12.78□□□□□ -0.36
RBFOX1-201ENST00000311745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.77□□□□□ -0.36
RBFOX1-201ENST00000311745 HECW2Q9P2P5 1572 aa12.77□□□□□ -0.37
RBFOX1-201ENST00000311745 POGZQ7Z3K3 1410 aa12.76□□□□□ -0.37
RBFOX1-201ENST00000311745 PPLO60437 1756 aa12.76□□□□□ -0.37
RBFOX1-201ENST00000311745 NRXN1Q9ULB1 1477 aa12.76□□□□□ -0.37
RBFOX1-201ENST00000311745 ZC3H13Q5T200 1668 aaKnown RBP12.76□□□□□ -0.37
RBFOX1-201ENST00000311745 MYO3AQ8NEV4 1616 aa12.75□□□□□ -0.37
RBFOX1-201ENST00000311745 ZNF518AQ6AHZ1 1483 aa12.74□□□□□ -0.37
RBFOX1-201ENST00000311745 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
RBFOX1-201ENST00000311745 PIK3C2BO00750 1634 aa12.74□□□□□ -0.37
RBFOX1-201ENST00000311745 ADGRB3O60242 1522 aa12.74□□□□□ -0.37
RBFOX1-201ENST00000311745 PER1O15534 1290 aaPredicted RBP12.74□□□□□ -0.37
RBFOX1-201ENST00000311745 MLH3Q9UHC1 1453 aa12.74□□□□□ -0.37
RBFOX1-201ENST00000311745 LRPPRCP42704 1394 aaKnown RBP12.73□□□□□ -0.37
RBFOX1-201ENST00000311745 DHX37Q8IY37 1157 aaKnown RBP12.73□□□□□ -0.37
RBFOX1-201ENST00000311745 LAS1LQ9Y4W2 734 aaKnown RBP12.73□□□□□ -0.37
RBFOX1-201ENST00000311745 DIP2CQ9Y2E4 1556 aa12.73□□□□□ -0.37
RBFOX1-201ENST00000311745 HNRNPUQ00839 825 aaKnown RBP eCLIP12.72□□□□□ -0.37
RBFOX1-201ENST00000311745 CAMSAP1Q5T5Y3 1602 aa12.72□□□□□ -0.37
RBFOX1-201ENST00000311745 MYOM2P54296 1465 aa12.72□□□□□ -0.37
RBFOX1-201ENST00000311745 RGL3Q3MIN7 710 aa12.72□□□□□ -0.37
RBFOX1-201ENST00000311745 PARD3Q8TEW0 1356 aa12.72□□□□□ -0.37
RBFOX1-201ENST00000311745 ZBED9Q6R2W3 1325 aa12.7□□□□□ -0.38
RBFOX1-201ENST00000311745 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
RBFOX1-201ENST00000311745 SYNMO15061 1565 aa12.7□□□□□ -0.38
RBFOX1-201ENST00000311745 CHMP4BQ9H444 224 aaKnown RBP12.7□□□□□ -0.38
RBFOX1-201ENST00000311745 NCBP3Q53F19 620 aaKnown RBP12.69□□□□□ -0.38
RBFOX1-201ENST00000311745 MRS2Q9HD23 443 aa12.69□□□□□ -0.38
RBFOX1-201ENST00000311745 ABCC3O15438 1527 aa12.69□□□□□ -0.38
RBFOX1-201ENST00000311745 CD109Q6YHK3 1445 aa12.69□□□□□ -0.38
RBFOX1-201ENST00000311745 PNISRQ8TF01 805 aaKnown RBP12.68□□□□□ -0.38
RBFOX1-201ENST00000311745 GLI2P10070 1586 aa12.68□□□□□ -0.38
RBFOX1-201ENST00000311745 ANP32AP39687 249 aaKnown RBP12.68□□□□□ -0.38
RBFOX1-201ENST00000311745 CFAP65Q6ZU64 1925 aaKnown RBP12.67□□□□□ -0.38
RBFOX1-201ENST00000311745 NAP1L5Q96NT1 182 aaPredicted RBP12.67□□□□□ -0.38
RBFOX1-201ENST00000311745 MYO5BQ9ULV0 1848 aa12.67□□□□□ -0.38
RBFOX1-201ENST00000311745 NPATQ14207 1427 aa12.67□□□□□ -0.38
RBFOX1-201ENST00000311745 RIMBP3CA6NJZ7 1639 aa12.67□□□□□ -0.38
RBFOX1-201ENST00000311745 RIMBP3BA6NNM3 1639 aa12.67□□□□□ -0.38
RBFOX1-201ENST00000311745 RIMBP3Q9UFD9 1639 aa12.67□□□□□ -0.38
RBFOX1-201ENST00000311745 BBXQ8WY36 941 aaPredicted RBP12.66□□□□□ -0.38
RBFOX1-201ENST00000311745 NAP1L2Q9ULW6 460 aaPredicted RBP12.66□□□□□ -0.38
RBFOX1-201ENST00000311745 NEO1Q92859 1461 aa12.66□□□□□ -0.38
RBFOX1-201ENST00000311745 ADGRB1O14514 1584 aa12.66□□□□□ -0.38
RBFOX1-201ENST00000311745 FAM9BQ8IZU0 186 aa12.66□□□□□ -0.38
RBFOX1-201ENST00000311745 SETBP1Q9Y6X0 1596 aa12.65□□□□□ -0.38
RBFOX1-201ENST00000311745 SCAF11Q99590 1463 aaKnown RBP12.65□□□□□ -0.38
RBFOX1-201ENST00000311745 KCNA4P22459 653 aa12.65□□□□□ -0.38
RBFOX1-201ENST00000311745 KDM5AP29375 1690 aaKnown RBP12.65□□□□□ -0.38
RBFOX1-201ENST00000311745 KTN1Q86UP2 1357 aaKnown RBP12.65□□□□□ -0.39
RBFOX1-201ENST00000311745 RGS3P49796 1198 aa12.64□□□□□ -0.39
RBFOX1-201ENST00000311745 SMG6Q86US8 1419 aaKnown RBP12.64□□□□□ -0.39
RBFOX1-201ENST00000311745 KIF3BO15066 747 aa12.64□□□□□ -0.39
RBFOX1-201ENST00000311745 HSP90AA1P07900 732 aaKnown RBP12.64□□□□□ -0.39
RBFOX1-201ENST00000311745 BRD4O60885 1362 aaPredicted RBP12.64□□□□□ -0.39
RBFOX1-201ENST00000311745 DIP2BQ9P265 1576 aa12.63□□□□□ -0.39
RBFOX1-201ENST00000311745 ERVK-7P63135 1459 aa12.63□□□□□ -0.39
RBFOX1-201ENST00000311745 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
RBFOX1-201ENST00000311745 NOS1P29475 1434 aa12.62□□□□□ -0.39
RBFOX1-201ENST00000311745 MYBBP1AQ9BQG0 1328 aaKnown RBP12.62□□□□□ -0.39
RBFOX1-201ENST00000311745 NEXMIFQ5QGS0 1516 aa12.62□□□□□ -0.39
RBFOX1-201ENST00000311745 ZMYM4Q5VZL5 1548 aa12.62□□□□□ -0.39
RBFOX1-201ENST00000311745 QRICH2Q9H0J4 1663 aa12.62□□□□□ -0.39
RBFOX1-201ENST00000311745 ARHGEF28Q8N1W1 1705 aaKnown RBP12.61□□□□□ -0.39
RBFOX1-201ENST00000311745 PIK3C2GO75747 1445 aa12.61□□□□□ -0.39
RBFOX1-201ENST00000311745 ADGRF5Q8IZF2 1346 aa12.61□□□□□ -0.39
RBFOX1-201ENST00000311745 NPM2Q86SE8 214 aaKnown RBP12.6□□□□□ -0.39
RBFOX1-201ENST00000311745 PREX1Q8TCU6 1659 aa12.6□□□□□ -0.39
RBFOX1-201ENST00000311745 BLMP54132 1417 aaPredicted RBP12.6□□□□□ -0.39
RBFOX1-201ENST00000311745 IPO9Q96P70 1041 aaKnown RBP12.59□□□□□ -0.39
RBFOX1-201ENST00000311745 KANK1Q14678 1352 aa12.59□□□□□ -0.39
RBFOX1-201ENST00000311745 POLR3GLQ9BT43 218 aa12.59□□□□□ -0.39
RBFOX1-201ENST00000311745 YEATS2Q9ULM3 1422 aa12.59□□□□□ -0.39
RBFOX1-201ENST00000311745 RALBP1Q15311 655 aa12.58□□□□□ -0.4
RBFOX1-201ENST00000311745 RRP9O43818 475 aaKnown RBP12.58□□□□□ -0.4
RBFOX1-201ENST00000311745 TMEM131LA2VDJ0 1609 aa12.58□□□□□ -0.4
RBFOX1-201ENST00000311745 KIF13AQ9H1H9 1805 aa12.57□□□□□ -0.4
RBFOX1-201ENST00000311745 ASXL1Q8IXJ9 1541 aa12.57□□□□□ -0.4
RBFOX1-201ENST00000311745 HAP1P54257 671 aaPredicted RBP12.56□□□□□ -0.4
RBFOX1-201ENST00000311745 PANK3Q9H999 370 aa12.56□□□□□ -0.4
RBFOX1-201ENST00000311745 WASHC2CQ9Y4E1 1318 aa12.56□□□□□ -0.4
RBFOX1-201ENST00000311745 SHPRHQ149N8 1683 aa12.55□□□□□ -0.4
RBFOX1-201ENST00000311745 INSRP06213 1382 aa12.55□□□□□ -0.4
RBFOX1-201ENST00000311745 GSE1Q14687 1217 aa12.55□□□□□ -0.4
RBFOX1-201ENST00000311745 FAM43AQ8N2R8 423 aa12.55□□□□□ -0.4
RBFOX1-201ENST00000311745 STAC3Q96MF2 364 aa12.55□□□□□ -0.4
RBFOX1-201ENST00000311745 ARHGAP31Q2M1Z3 1444 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms