RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 POLR1AO95602 1720 aaPredicted RBP13.43□□□□□ -0.26
MSRB3-201ENST00000308259 LRPPRCP42704 1394 aaKnown RBP13.43□□□□□ -0.26
MSRB3-201ENST00000308259 DHX37Q8IY37 1157 aaKnown RBP13.43□□□□□ -0.26
MSRB3-201ENST00000308259 MAPK8IP2Q13387 824 aaPredicted RBP13.42□□□□□ -0.26
MSRB3-201ENST00000308259 HDGFP51858 240 aaKnown RBP13.42□□□□□ -0.26
MSRB3-201ENST00000308259 PER1O15534 1290 aaPredicted RBP13.42□□□□□ -0.26
MSRB3-201ENST00000308259 ABCC10Q5T3U5 1492 aa13.41□□□□□ -0.26
MSRB3-201ENST00000308259 C20orf194Q5TEA3 1177 aa13.41□□□□□ -0.26
MSRB3-201ENST00000308259 CRBNQ96SW2 442 aa13.41□□□□□ -0.26
MSRB3-201ENST00000308259 NAP1L2Q9ULW6 460 aaPredicted RBP13.41□□□□□ -0.26
MSRB3-201ENST00000308259 PRDM10Q9NQV6 1147 aa13.4□□□□□ -0.26
MSRB3-201ENST00000308259 NUP160Q12769 1436 aa13.4□□□□□ -0.26
MSRB3-201ENST00000308259 CDC42BPAQ5VT25 1732 aa13.4□□□□□ -0.26
MSRB3-201ENST00000308259 CROCC2H7BZ55 1655 aa13.4□□□□□ -0.26
MSRB3-201ENST00000308259 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.27
MSRB3-201ENST00000308259 MYH16Q9H6N6 1097 aa13.4□□□□□ -0.27
MSRB3-201ENST00000308259 TESK2Q96S53 571 aa13.39□□□□□ -0.27
MSRB3-201ENST00000308259 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
MSRB3-201ENST00000308259 ZBTB7CA1YPR0 619 aa13.38□□□□□ -0.27
MSRB3-201ENST00000308259 SPRYD3Q8NCJ5 442 aa13.38□□□□□ -0.27
MSRB3-201ENST00000308259 PRAG1Q86YV5 1406 aa13.38□□□□□ -0.27
MSRB3-201ENST00000308259 FAM135AQ9P2D6 1515 aa13.38□□□□□ -0.27
MSRB3-201ENST00000308259 DNTTIP2Q5QJE6 756 aaKnown RBP13.38□□□□□ -0.27
MSRB3-201ENST00000308259 GGT6Q6P531 493 aa13.38□□□□□ -0.27
MSRB3-201ENST00000308259 PLEKHH2Q8IVE3 1493 aa13.37□□□□□ -0.27
MSRB3-201ENST00000308259 MLECQ14165 292 aa13.37□□□□□ -0.27
MSRB3-201ENST00000308259 APPP05067 770 aa13.37□□□□□ -0.27
MSRB3-201ENST00000308259 PDCL3Q9H2J4 239 aa13.37□□□□□ -0.27
MSRB3-201ENST00000308259 PARD3Q8TEW0 1356 aa13.37□□□□□ -0.27
MSRB3-201ENST00000308259 POGKQ9P215 609 aa13.37□□□□□ -0.27
MSRB3-201ENST00000308259 CCDC146Q8IYE0 955 aa13.36□□□□□ -0.27
MSRB3-201ENST00000308259 PLA2R1Q13018 1463 aa13.36□□□□□ -0.27
MSRB3-201ENST00000308259 BECN1Q14457 450 aa13.36□□□□□ -0.27
MSRB3-201ENST00000308259 TMF1P82094 1093 aa13.35□□□□□ -0.27
MSRB3-201ENST00000308259 ABCA8O94911 1581 aa13.35□□□□□ -0.27
MSRB3-201ENST00000308259 ARHGEF12Q9NZN5 1544 aa13.35□□□□□ -0.27
MSRB3-201ENST00000308259 ADCY10Q96PN6 1610 aa13.35□□□□□ -0.27
MSRB3-201ENST00000308259 KIF3BO15066 747 aa13.34□□□□□ -0.27
MSRB3-201ENST00000308259 MSNP26038 577 aaKnown RBP13.34□□□□□ -0.27
MSRB3-201ENST00000308259 A2MP01023 1474 aa13.34□□□□□ -0.27
MSRB3-201ENST00000308259 CCDC141Q6ZP82 1450 aa13.34□□□□□ -0.27
MSRB3-201ENST00000308259 SYCP2Q9BX26 1530 aa13.34□□□□□ -0.27
MSRB3-201ENST00000308259 SHANK2Q9UPX8 1470 aa13.33□□□□□ -0.28
MSRB3-201ENST00000308259 KDM5DQ9BY66 1539 aa13.33□□□□□ -0.28
MSRB3-201ENST00000308259 ARHGAP5Q13017 1502 aa13.33□□□□□ -0.28
MSRB3-201ENST00000308259 SAMD9LQ8IVG5 1584 aa13.32□□□□□ -0.28
MSRB3-201ENST00000308259 KNSTRNQ9Y448 316 aa13.32□□□□□ -0.28
MSRB3-201ENST00000308259 ERBINQ96RT1 1412 aa13.32□□□□□ -0.28
MSRB3-201ENST00000308259 WDR43Q15061 677 aaKnown RBP eCLIP13.32□□□□□ -0.28
MSRB3-201ENST00000308259 TPM2P07951 284 aa13.31□□□□□ -0.28
MSRB3-201ENST00000308259 BACH2Q9BYV9 841 aa13.31□□□□□ -0.28
MSRB3-201ENST00000308259 SENP3Q9H4L4 574 aaPredicted RBP13.31□□□□□ -0.28
MSRB3-201ENST00000308259 KIAA1211Q6ZU35 1233 aa13.3□□□□□ -0.28
MSRB3-201ENST00000308259 PDE3BQ13370 1112 aa13.3□□□□□ -0.28
MSRB3-201ENST00000308259 AFAP1Q8N556 730 aa13.3□□□□□ -0.28
MSRB3-201ENST00000308259 CALD1Q05682 793 aaKnown RBP13.29□□□□□ -0.28
MSRB3-201ENST00000308259 PPP2R1AP30153 589 aa13.29□□□□□ -0.28
MSRB3-201ENST00000308259 UPF2Q9HAU5 1272 aaKnown RBP13.29□□□□□ -0.28
MSRB3-201ENST00000308259 VGLL3A8MV65 326 aa13.29□□□□□ -0.28
MSRB3-201ENST00000308259 TULP1O00294 542 aaPredicted RBP13.28□□□□□ -0.28
MSRB3-201ENST00000308259 C14orf37Q86TY3 774 aa13.28□□□□□ -0.28
MSRB3-201ENST00000308259 PLEKHH1Q9ULM0 1364 aa13.28□□□□□ -0.28
MSRB3-201ENST00000308259 ESPNB1AK53 854 aa13.27□□□□□ -0.28
MSRB3-201ENST00000308259 COL17A1Q9UMD9 1497 aaPredicted RBP13.27□□□□□ -0.28
MSRB3-201ENST00000308259 CLCN1P35523 988 aa13.27□□□□□ -0.29
MSRB3-201ENST00000308259 CD109Q6YHK3 1445 aa13.27□□□□□ -0.29
MSRB3-201ENST00000308259 TRPM1Q7Z4N2 1603 aa13.26□□□□□ -0.29
MSRB3-201ENST00000308259 SPINK5Q9NQ38 1064 aaPredicted RBP13.26□□□□□ -0.29
MSRB3-201ENST00000308259 CDC42BPBQ9Y5S2 1711 aa13.26□□□□□ -0.29
MSRB3-201ENST00000308259 R3HCC1Q9Y3T6 440 aaKnown RBP13.26□□□□□ -0.29
MSRB3-201ENST00000308259 TTC37Q6PGP7 1564 aa13.25□□□□□ -0.29
MSRB3-201ENST00000308259 NEUROD2Q15784 382 aa13.25□□□□□ -0.29
MSRB3-201ENST00000308259 MAGI2Q86UL8 1455 aa13.24□□□□□ -0.29
MSRB3-201ENST00000308259 APAF1O14727 1248 aa13.24□□□□□ -0.29
MSRB3-201ENST00000308259 E9PCH4 1651 aa13.24□□□□□ -0.29
MSRB3-201ENST00000308259 DUSP27Q5VZP5 1158 aa13.24□□□□□ -0.29
MSRB3-201ENST00000308259 GPRASP1Q5JY77 1395 aa13.24□□□□□ -0.29
MSRB3-201ENST00000308259 BCAR3O75815 825 aa13.23□□□□□ -0.29
MSRB3-201ENST00000308259 ARHGEF5Q12774 1597 aa13.23□□□□□ -0.29
MSRB3-201ENST00000308259 MS4A1P11836 297 aa13.23□□□□□ -0.29
MSRB3-201ENST00000308259 NCBP3Q53F19 620 aaKnown RBP13.23□□□□□ -0.29
MSRB3-201ENST00000308259 PANK2Q9BZ23 570 aa13.23□□□□□ -0.29
MSRB3-201ENST00000308259 PATL2C9JE40 543 aaKnown RBP13.23□□□□□ -0.29
MSRB3-201ENST00000308259 DMRT2Q9Y5R5 561 aa13.23□□□□□ -0.29
MSRB3-201ENST00000308259 ERCC6L2Q5T890 1561 aa13.22□□□□□ -0.29
MSRB3-201ENST00000308259 GOLGA2Q08379 1002 aa13.22□□□□□ -0.29
MSRB3-201ENST00000308259 TNNT3P45378 269 aaPredicted RBP13.22□□□□□ -0.29
MSRB3-201ENST00000308259 CFAP70Q5T0N1 1121 aa13.22□□□□□ -0.29
MSRB3-201ENST00000308259 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.22□□□□□ -0.29
MSRB3-201ENST00000308259 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
MSRB3-201ENST00000308259 BLMP54132 1417 aaPredicted RBP13.21□□□□□ -0.29
MSRB3-201ENST00000308259 TRAPPC8Q9Y2L5 1435 aa13.21□□□□□ -0.29
MSRB3-201ENST00000308259 POGZQ7Z3K3 1410 aa13.21□□□□□ -0.3
MSRB3-201ENST00000308259 E9PSI1 815 aa13.21□□□□□ -0.3
MSRB3-201ENST00000308259 CHMP4AQ9BY43 222 aa13.21□□□□□ -0.3
MSRB3-201ENST00000308259 RRP7AQ9Y3A4 280 aaKnown RBP13.2□□□□□ -0.3
MSRB3-201ENST00000308259 SCAPERQ9BY12 1400 aa13.2□□□□□ -0.3
MSRB3-201ENST00000308259 PREX2Q70Z35 1606 aa13.2□□□□□ -0.3
MSRB3-201ENST00000308259 PRDM15P57071 1507 aaPredicted RBP13.19□□□□□ -0.3
MSRB3-201ENST00000308259 BRD2P25440 801 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms