RNA–Protein interactions for RNA: ENST00000308008.10

RAPGEF6-202, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-202ENST00000308008 ARHGEF12Q9NZN5 1544 aa4.35□□□□□ -1.71
RAPGEF6-202ENST00000308008 BIVM-ERCC5R4GMW8 1640 aa4.35□□□□□ -1.71
RAPGEF6-202ENST00000308008 CERS3Q8IU89 383 aa4.35□□□□□ -1.71
RAPGEF6-202ENST00000308008 CALR3Q96L12 384 aaKnown RBP4.35□□□□□ -1.71
RAPGEF6-202ENST00000308008 PCMTD1Q96MG8 357 aaPredicted RBP4.35□□□□□ -1.71
RAPGEF6-202ENST00000308008 IFFO2Q5TF58 517 aa4.35□□□□□ -1.71
RAPGEF6-202ENST00000308008 FOSBP53539 338 aa4.34□□□□□ -1.71
RAPGEF6-202ENST00000308008 PLA2R1Q13018 1463 aa4.34□□□□□ -1.71
RAPGEF6-202ENST00000308008 SPHKAPQ2M3C7 1700 aa4.34□□□□□ -1.71
RAPGEF6-202ENST00000308008 CCDC88BA6NC98 1476 aa4.34□□□□□ -1.71
RAPGEF6-202ENST00000308008 RGS3P49796 1198 aa4.34□□□□□ -1.71
RAPGEF6-202ENST00000308008 FAM43AQ8N2R8 423 aa4.34□□□□□ -1.71
RAPGEF6-202ENST00000308008 STAC3Q96MF2 364 aa4.34□□□□□ -1.71
RAPGEF6-202ENST00000308008 IVNS1ABPQ9Y6Y0 642 aa4.34□□□□□ -1.71
RAPGEF6-202ENST00000308008 FRAT1Q92837 279 aaPredicted RBP4.34□□□□□ -1.72
RAPGEF6-202ENST00000308008 LARP6Q9BRS8 491 aaKnown RBP4.34□□□□□ -1.72
RAPGEF6-202ENST00000308008 ABCA9Q8IUA7 1624 aa4.33□□□□□ -1.72
RAPGEF6-202ENST00000308008 PTPRMP28827 1452 aa4.33□□□□□ -1.72
RAPGEF6-202ENST00000308008 NUTM2FA1L443 756 aa4.33□□□□□ -1.72
RAPGEF6-202ENST00000308008 MLLT3P42568 568 aaPredicted RBP4.33□□□□□ -1.72
RAPGEF6-202ENST00000308008 FAM212AQ96EL1 285 aa4.33□□□□□ -1.72
RAPGEF6-202ENST00000308008 SETD1AO15047 1707 aaKnown RBP4.33□□□□□ -1.72
RAPGEF6-202ENST00000308008 GRIN2AQ12879 1464 aa4.33□□□□□ -1.72
RAPGEF6-202ENST00000308008 FRMPD1Q5SYB0 1578 aa4.33□□□□□ -1.72
RAPGEF6-202ENST00000308008 DEPDC5O75140 1603 aa4.32□□□□□ -1.72
RAPGEF6-202ENST00000308008 B4GALNT3Q6L9W6 998 aa4.32□□□□□ -1.72
RAPGEF6-202ENST00000308008 SIN3AQ96ST3 1273 aa4.32□□□□□ -1.72
RAPGEF6-202ENST00000308008 CUL7Q14999 1698 aa4.32□□□□□ -1.72
RAPGEF6-202ENST00000308008 PLEKHG3A1L390 1219 aa4.32□□□□□ -1.72
RAPGEF6-202ENST00000308008 MCM6Q14566 821 aa4.32□□□□□ -1.72
RAPGEF6-202ENST00000308008 RICTORQ6R327 1708 aa4.32□□□□□ -1.72
RAPGEF6-202ENST00000308008 CDCA8Q53HL2 280 aa4.32□□□□□ -1.72
RAPGEF6-202ENST00000308008 POLR3EQ9NVU0 708 aa4.32□□□□□ -1.72
RAPGEF6-202ENST00000308008 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.32□□□□□ -1.72
RAPGEF6-202ENST00000308008 ABCC2Q92887 1545 aa4.31□□□□□ -1.72
RAPGEF6-202ENST00000308008 A6NJR5 290 aa4.31□□□□□ -1.72
RAPGEF6-202ENST00000308008 AGLP35573 1532 aa4.31□□□□□ -1.72
RAPGEF6-202ENST00000308008 CHMP4BQ9H444 224 aaKnown RBP4.31□□□□□ -1.72
RAPGEF6-202ENST00000308008 CEP162Q5TB80 1403 aa4.31□□□□□ -1.72
RAPGEF6-202ENST00000308008 SPINK5Q9NQ38 1064 aaPredicted RBP4.31□□□□□ -1.72
RAPGEF6-202ENST00000308008 TMEM51Q9NW97 253 aa4.31□□□□□ -1.72
RAPGEF6-202ENST00000308008 NEO1Q92859 1461 aa4.31□□□□□ -1.72
RAPGEF6-202ENST00000308008 RNF17Q9BXT8 1623 aaKnown RBP4.3□□□□□ -1.72
RAPGEF6-202ENST00000308008 CSB-PGBD3P0DP91 1061 aa4.3□□□□□ -1.72
RAPGEF6-202ENST00000308008 CHRM1P11229 460 aaPredicted RBP4.3□□□□□ -1.72
RAPGEF6-202ENST00000308008 POLA1P09884 1462 aaPredicted RBP4.3□□□□□ -1.72
RAPGEF6-202ENST00000308008 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.3□□□□□ -1.72
RAPGEF6-202ENST00000308008 RRP9O43818 475 aaKnown RBP4.3□□□□□ -1.72
RAPGEF6-202ENST00000308008 CCDC184Q52MB2 194 aa4.3□□□□□ -1.72
RAPGEF6-202ENST00000308008 ZNF830Q96NB3 372 aaPredicted RBP4.3□□□□□ -1.72
RAPGEF6-202ENST00000308008 CENPJQ9HC77 1338 aaPredicted RBP4.3□□□□□ -1.72
RAPGEF6-202ENST00000308008 ANKRD62A6NC57 917 aa4.3□□□□□ -1.72
RAPGEF6-202ENST00000308008 ABL2P42684 1182 aa4.3□□□□□ -1.72
RAPGEF6-202ENST00000308008 CHMP7Q8WUX9 453 aaPredicted RBP4.3□□□□□ -1.72
RAPGEF6-202ENST00000308008 KDM5AP29375 1690 aaKnown RBP4.3□□□□□ -1.72
RAPGEF6-202ENST00000308008 NAP1L2Q9ULW6 460 aaPredicted RBP4.29□□□□□ -1.72
RAPGEF6-202ENST00000308008 RNF123Q5XPI4 1314 aa4.29□□□□□ -1.72
RAPGEF6-202ENST00000308008 KIF21BO75037 1637 aa4.29□□□□□ -1.72
RAPGEF6-202ENST00000308008 PARP9Q8IXQ6 854 aa4.29□□□□□ -1.72
RAPGEF6-202ENST00000308008 ERBB4Q15303 1308 aa4.29□□□□□ -1.72
RAPGEF6-202ENST00000308008 NEFMP07197 916 aa4.29□□□□□ -1.72
RAPGEF6-202ENST00000308008 CALD1Q05682 793 aaKnown RBP4.28□□□□□ -1.72
RAPGEF6-202ENST00000308008 LAS1LQ9Y4W2 734 aaKnown RBP4.28□□□□□ -1.72
RAPGEF6-202ENST00000308008 CROCC2H7BZ55 1655 aa4.28□□□□□ -1.72
RAPGEF6-202ENST00000308008 PPP4R2Q9NY27 417 aa4.28□□□□□ -1.72
RAPGEF6-202ENST00000308008 POLR1AO95602 1720 aaPredicted RBP4.28□□□□□ -1.72
RAPGEF6-202ENST00000308008 KIAA0556O60303 1618 aa4.28□□□□□ -1.72
RAPGEF6-202ENST00000308008 CCDC102AQ96A19 550 aa4.28□□□□□ -1.72
RAPGEF6-202ENST00000308008 GDPD2Q9HCC8 539 aa4.28□□□□□ -1.72
RAPGEF6-202ENST00000308008 LAMC1P11047 1609 aa4.28□□□□□ -1.72
RAPGEF6-202ENST00000308008 MRRFQ96E11 262 aaKnown RBP4.28□□□□□ -1.73
RAPGEF6-202ENST00000308008 MADDQ8WXG6 1647 aa4.27□□□□□ -1.73
RAPGEF6-202ENST00000308008 CLSTN1O94985 981 aa4.27□□□□□ -1.73
RAPGEF6-202ENST00000308008 WIZO95785 1651 aa4.27□□□□□ -1.73
RAPGEF6-202ENST00000308008 GRXCR2A6NFK2 248 aa4.27□□□□□ -1.73
RAPGEF6-202ENST00000308008 UNCXA6NJT0 531 aa4.27□□□□□ -1.73
RAPGEF6-202ENST00000308008 NFKBIBQ15653 356 aa4.27□□□□□ -1.73
RAPGEF6-202ENST00000308008 ILDR2Q71H61 639 aa4.27□□□□□ -1.73
RAPGEF6-202ENST00000308008 EFCAB5A4FU69 1503 aa4.27□□□□□ -1.73
RAPGEF6-202ENST00000308008 HSP90AA2PQ14568 343 aaPredicted RBP4.27□□□□□ -1.73
RAPGEF6-202ENST00000308008 TMED8Q6PL24 325 aaPredicted RBP4.27□□□□□ -1.73
RAPGEF6-202ENST00000308008 CCER2I3L3R5 266 aa4.26□□□□□ -1.73
RAPGEF6-202ENST00000308008 ALKQ9UM73 1620 aa4.26□□□□□ -1.73
RAPGEF6-202ENST00000308008 PPP1R37O75864 691 aa4.26□□□□□ -1.73
RAPGEF6-202ENST00000308008 NCLP19338 710 aaKnown RBP4.26□□□□□ -1.73
RAPGEF6-202ENST00000308008 DDX10Q13206 875 aaKnown RBP4.26□□□□□ -1.73
RAPGEF6-202ENST00000308008 PLSCR2Q9NRY7 297 aa4.26□□□□□ -1.73
RAPGEF6-202ENST00000308008 POGZQ7Z3K3 1410 aa4.26□□□□□ -1.73
RAPGEF6-202ENST00000308008 ANKRD13AQ8IZ07 590 aa4.26□□□□□ -1.73
RAPGEF6-202ENST00000308008 BCCIPQ9P287 314 aaKnown RBP eCLIP4.25□□□□□ -1.73
RAPGEF6-202ENST00000308008 KCNG1Q9UIX4 513 aa4.25□□□□□ -1.73
RAPGEF6-202ENST00000308008 RIPK4P57078 832 aa4.25□□□□□ -1.73
RAPGEF6-202ENST00000308008 CCDC125Q86Z20 511 aa4.25□□□□□ -1.73
RAPGEF6-202ENST00000308008 RAPGEF6Q8TEU7 1601 aa4.25□□□□□ -1.73
RAPGEF6-202ENST00000308008 AQRO60306 1485 aaKnown RBP eCLIP4.25□□□□□ -1.732e-6■■■□□ 18.6
RAPGEF6-202ENST00000308008 ZCCHC11Q5TAX3 1644 aaKnown RBP4.25□□□□□ -1.73
RAPGEF6-202ENST00000308008 ONECUT3O60422 494 aaPredicted RBP4.24□□□□□ -1.73
RAPGEF6-202ENST00000308008 SKAP1Q86WV1 359 aa4.24□□□□□ -1.73
RAPGEF6-202ENST00000308008 FHAD1B1AJZ9 1412 aa4.24□□□□□ -1.73
RAPGEF6-202ENST00000308008 SHPRHQ149N8 1683 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms