RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 GOLGA6L7A0A1B0GV03 622 aa16.26■□□□□ 0.19
TRIM56-201ENST00000306085 GOLGA6L10A6NI86 522 aa16.26■□□□□ 0.19
TRIM56-201ENST00000306085 CCDC146Q8IYE0 955 aa16.25■□□□□ 0.19
TRIM56-201ENST00000306085 TSHZ2Q9NRE2 1034 aa16.25■□□□□ 0.19
TRIM56-201ENST00000306085 CPLX2Q6PUV4 134 aaKnown RBP16.25■□□□□ 0.19
TRIM56-201ENST00000306085 NFXL1Q6ZNB6 911 aa16.25■□□□□ 0.19
TRIM56-201ENST00000306085 CGNL1Q0VF96 1302 aa16.24■□□□□ 0.19
TRIM56-201ENST00000306085 TAF3Q5VWG9 929 aa16.24■□□□□ 0.19
TRIM56-201ENST00000306085 CENPJQ9HC77 1338 aaPredicted RBP16.24■□□□□ 0.19
TRIM56-201ENST00000306085 ANKRD45Q5TZF3 282 aa16.23■□□□□ 0.19
TRIM56-201ENST00000306085 CENPHQ9H3R5 247 aa16.23■□□□□ 0.19
TRIM56-201ENST00000306085 HDGFP51858 240 aaKnown RBP16.23■□□□□ 0.19
TRIM56-201ENST00000306085 VPS37CA5D8V6 355 aaPredicted RBP16.22■□□□□ 0.19
TRIM56-201ENST00000306085 MTERF4Q7Z6M4 381 aaKnown RBP16.22■□□□□ 0.19
TRIM56-201ENST00000306085 NAT10Q9H0A0 1025 aaKnown RBP16.22■□□□□ 0.19
TRIM56-201ENST00000306085 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
TRIM56-201ENST00000306085 EZRP15311 586 aaKnown RBP16.21■□□□□ 0.19
TRIM56-201ENST00000306085 VPS37DQ86XT2 251 aa16.21■□□□□ 0.19
TRIM56-201ENST00000306085 LMOD3Q0VAK6 560 aa16.21■□□□□ 0.19
TRIM56-201ENST00000306085 ERLIN2O94905 339 aa16.2■□□□□ 0.18
TRIM56-201ENST00000306085 ANKRD18AQ8IVF6 992 aa16.2■□□□□ 0.18
TRIM56-201ENST00000306085 LRRFIP1Q32MZ4 808 aaKnown RBP16.2■□□□□ 0.18
TRIM56-201ENST00000306085 ROCK2O75116 1388 aaKnown RBP16.2■□□□□ 0.18
TRIM56-201ENST00000306085 TMEM132AQ24JP5 1023 aa16.2■□□□□ 0.18
TRIM56-201ENST00000306085 BCCIPQ9P287 314 aaKnown RBP eCLIP16.2■□□□□ 0.18
TRIM56-201ENST00000306085 CCDC97Q96F63 343 aaPredicted RBP16.19■□□□□ 0.18
TRIM56-201ENST00000306085 GIMAP7Q8NHV1 300 aa16.19■□□□□ 0.18
TRIM56-201ENST00000306085 NF2P35240 595 aa16.19■□□□□ 0.18
TRIM56-201ENST00000306085 CCDC39Q9UFE4 941 aa16.19■□□□□ 0.18
TRIM56-201ENST00000306085 TAX1BP1Q86VP1 789 aa16.19■□□□□ 0.18
TRIM56-201ENST00000306085 LTV1Q96GA3 475 aaPredicted RBP16.19■□□□□ 0.18
TRIM56-201ENST00000306085 CCDC73Q6ZRK6 1079 aa16.19■□□□□ 0.18
TRIM56-201ENST00000306085 MSH5O43196 834 aa16.18■□□□□ 0.18
TRIM56-201ENST00000306085 CCER2I3L3R5 266 aa16.17■□□□□ 0.18
TRIM56-201ENST00000306085 ZKSCAN1P17029 563 aaPredicted RBP16.17■□□□□ 0.18
TRIM56-201ENST00000306085 ERICH2A1L162 156 aa16.17■□□□□ 0.18
TRIM56-201ENST00000306085 NASPP49321 788 aaPredicted RBP16.17■□□□□ 0.18
TRIM56-201ENST00000306085 TRDNQ13061 729 aa16.16■□□□□ 0.18
TRIM56-201ENST00000306085 SMC2O95347 1197 aa16.16■□□□□ 0.18
TRIM56-201ENST00000306085 FAM161AQ3B820 660 aa16.16■□□□□ 0.18
TRIM56-201ENST00000306085 RUFY2Q8WXA3 655 aa16.16■□□□□ 0.18
TRIM56-201ENST00000306085 SAFBQ15424 915 aaKnown RBP eCLIP16.16■□□□□ 0.18
TRIM56-201ENST00000306085 REC8O95072 547 aa16.15■□□□□ 0.18
TRIM56-201ENST00000306085 RBM10P98175 930 aaKnown RBP16.15■□□□□ 0.18
TRIM56-201ENST00000306085 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.15■□□□□ 0.187e-7■■■□□ 16.6
TRIM56-201ENST00000306085 SYCP1Q15431 976 aa16.15■□□□□ 0.18
TRIM56-201ENST00000306085 DEF6Q9H4E7 631 aa16.15■□□□□ 0.18
TRIM56-201ENST00000306085 FAM193AP78312 1265 aa16.15■□□□□ 0.18
TRIM56-201ENST00000306085 GBP2P32456 591 aaPredicted RBP16.14■□□□□ 0.17
TRIM56-201ENST00000306085 BRPF1P55201 1214 aaPredicted RBP16.14■□□□□ 0.17
TRIM56-201ENST00000306085 HMGN5P82970 282 aaKnown RBP16.14■□□□□ 0.17
TRIM56-201ENST00000306085 NGEFQ8N5V2 710 aa16.13■□□□□ 0.17
TRIM56-201ENST00000306085 RALBP1Q15311 655 aa16.13■□□□□ 0.17
TRIM56-201ENST00000306085 TRIM5Q9C035 493 aa16.12■□□□□ 0.17
TRIM56-201ENST00000306085 SMC3Q9UQE7 1217 aa16.12■□□□□ 0.17
TRIM56-201ENST00000306085 EIF3AQ14152 1382 aaKnown RBP16.12■□□□□ 0.17
TRIM56-201ENST00000306085 ERICH4A6NGS2 130 aa16.12■□□□□ 0.17
TRIM56-201ENST00000306085 RBM25P49756 843 aaKnown RBP16.12■□□□□ 0.17
TRIM56-201ENST00000306085 GOLGA6L10A0A0M3HER8 536 aa16.12■□□□□ 0.17
TRIM56-201ENST00000306085 KDM4AO75164 1064 aa16.12■□□□□ 0.17
TRIM56-201ENST00000306085 WWC2Q6AWC2 1192 aa16.11■□□□□ 0.17
TRIM56-201ENST00000306085 BRMS1Q9HCU9 246 aa16.11■□□□□ 0.17
TRIM56-201ENST00000306085 HSPA5P11021 654 aaKnown RBP16.11■□□□□ 0.17
TRIM56-201ENST00000306085 SMARCE1Q969G3 411 aa16.11■□□□□ 0.17
TRIM56-201ENST00000306085 CEP162Q5TB80 1403 aa16.11■□□□□ 0.17
TRIM56-201ENST00000306085 AMPHP49418 695 aa16.11■□□□□ 0.17
TRIM56-201ENST00000306085 C9orf78Q9NZ63 289 aaPredicted RBP16.1■□□□□ 0.17
TRIM56-201ENST00000306085 MAGEC2Q9UBF1 373 aaPredicted RBP16.1■□□□□ 0.17
TRIM56-201ENST00000306085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRIM56-201ENST00000306085 CENPQQ7L2Z9 268 aaPredicted RBP16.1■□□□□ 0.17
TRIM56-201ENST00000306085 RRP7AQ9Y3A4 280 aaKnown RBP16.1■□□□□ 0.17
TRIM56-201ENST00000306085 FYB1O15117 783 aa16.1■□□□□ 0.17
TRIM56-201ENST00000306085 USP8P40818 1118 aa16.1■□□□□ 0.17
TRIM56-201ENST00000306085 RNF20Q5VTR2 975 aa16.1■□□□□ 0.17
TRIM56-201ENST00000306085 CEP63Q96MT8 703 aa16.1■□□□□ 0.17
TRIM56-201ENST00000306085 CCP110O43303 1012 aa16.09■□□□□ 0.17
TRIM56-201ENST00000306085 MTMR7Q9Y216 660 aa16.09■□□□□ 0.17
TRIM56-201ENST00000306085 TICAM2Q86XR7 235 aa16.09■□□□□ 0.17
TRIM56-201ENST00000306085 PDE4AP27815 886 aa16.09■□□□□ 0.17
TRIM56-201ENST00000306085 RNF214Q8ND24 703 aa16.09■□□□□ 0.17
TRIM56-201ENST00000306085 BCL2L13Q9BXK5 485 aa16.09■□□□□ 0.17
TRIM56-201ENST00000306085 SDF4Q9BRK5 362 aa16.08■□□□□ 0.17
TRIM56-201ENST00000306085 IFIT2P09913 472 aaKnown RBP16.08■□□□□ 0.16
TRIM56-201ENST00000306085 GOLGA3Q08378 1498 aa16.08■□□□□ 0.16
TRIM56-201ENST00000306085 SEPT11Q9NVA2 429 aaKnown RBP16.08■□□□□ 0.16
TRIM56-201ENST00000306085 SPC24Q8NBT2 197 aa16.07■□□□□ 0.16
TRIM56-201ENST00000306085 IBSPP21815 317 aaPredicted RBP16.07■□□□□ 0.16
TRIM56-201ENST00000306085 CCDC181Q5TID7 509 aa16.07■□□□□ 0.16
TRIM56-201ENST00000306085 CDK5RAP3Q96JB5 506 aa16.06■□□□□ 0.16
TRIM56-201ENST00000306085 FMNL2Q96PY5 1086 aa16.06■□□□□ 0.16
TRIM56-201ENST00000306085 TRHP20396 242 aaPredicted RBP16.06■□□□□ 0.16
TRIM56-201ENST00000306085 IKQ13123 557 aaPredicted RBP16.06■□□□□ 0.16
TRIM56-201ENST00000306085 CCNB3Q8WWL7 1395 aa16.06■□□□□ 0.16
TRIM56-201ENST00000306085 AEBP1Q8IUX7 1158 aa16.05■□□□□ 0.16
TRIM56-201ENST00000306085 RBM33Q96EV2 1170 aaKnown RBP16.05■□□□□ 0.16
TRIM56-201ENST00000306085 CCDC112Q8NEF3 446 aa16.04■□□□□ 0.16
TRIM56-201ENST00000306085 LRRCC1Q9C099 1032 aa16.04■□□□□ 0.16
TRIM56-201ENST00000306085 PLIN1O60240 522 aa16.04■□□□□ 0.16
TRIM56-201ENST00000306085 RABEP1Q15276 862 aa16.04■□□□□ 0.16
TRIM56-201ENST00000306085 FILIP1LQ4L180 1135 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms