RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ELL2O00472 640 aaPredicted RBP16.68■□□□□ 0.26
DDX54-201ENST00000306014 TERF2IPQ9NYB0 399 aa16.68■□□□□ 0.26
DDX54-201ENST00000306014 WDR62O43379 1518 aa16.67■□□□□ 0.26
DDX54-201ENST00000306014 NGEFQ8N5V2 710 aa16.67■□□□□ 0.26
DDX54-201ENST00000306014 ARHGAP5Q13017 1502 aa16.66■□□□□ 0.26
DDX54-201ENST00000306014 RUNDC1Q96C34 613 aa16.66■□□□□ 0.26
DDX54-201ENST00000306014 CALD1Q05682 793 aaKnown RBP16.65■□□□□ 0.26
DDX54-201ENST00000306014 C20orf194Q5TEA3 1177 aa16.65■□□□□ 0.26
DDX54-201ENST00000306014 DZIP1LQ8IYY4 767 aaKnown RBP16.65■□□□□ 0.26
DDX54-201ENST00000306014 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.64■□□□□ 0.25
DDX54-201ENST00000306014 CFAP70Q5T0N1 1121 aa16.64■□□□□ 0.25
DDX54-201ENST00000306014 ANKRD45Q5TZF3 282 aa16.64■□□□□ 0.25
DDX54-201ENST00000306014 ANO8Q9HCE9 1232 aaPredicted RBP16.63■□□□□ 0.25
DDX54-201ENST00000306014 TCP11L2Q8N4U5 519 aa16.62■□□□□ 0.25
DDX54-201ENST00000306014 DDX11L8A8MPP1 907 aa16.62■□□□□ 0.25
DDX54-201ENST00000306014 CFAP44Q96MT7 982 aa16.62■□□□□ 0.25
DDX54-201ENST00000306014 HAP1P54257 671 aaPredicted RBP16.61■□□□□ 0.25
DDX54-201ENST00000306014 RSPH6AQ9H0K4 717 aa16.61■□□□□ 0.25
DDX54-201ENST00000306014 DDX19BQ9UMR2 479 aa16.61■□□□□ 0.25
DDX54-201ENST00000306014 ERBINQ96RT1 1412 aa16.61■□□□□ 0.25
DDX54-201ENST00000306014 PTMSP20962 102 aa16.61■□□□□ 0.25
DDX54-201ENST00000306014 EVC2Q86UK5 1308 aa16.6■□□□□ 0.25
DDX54-201ENST00000306014 OS9Q13438 667 aaPredicted RBP16.6■□□□□ 0.25
DDX54-201ENST00000306014 MCCP23508 829 aa16.59■□□□□ 0.25
DDX54-201ENST00000306014 MTHFSP49914 203 aa16.59■□□□□ 0.25
DDX54-201ENST00000306014 CHMP5Q9NZZ3 219 aa16.59■□□□□ 0.25
DDX54-201ENST00000306014 C22orf23Q9BZE7 217 aa16.59■□□□□ 0.25
DDX54-201ENST00000306014 TMEM132EQ6IEE7 984 aa16.58■□□□□ 0.25
DDX54-201ENST00000306014 RTF1Q92541 710 aaKnown RBP16.58■□□□□ 0.24
DDX54-201ENST00000306014 STAC3Q96MF2 364 aa16.58■□□□□ 0.24
DDX54-201ENST00000306014 LNPKQ9C0E8 428 aa16.58■□□□□ 0.24
DDX54-201ENST00000306014 EIF4G3O43432 1585 aaKnown RBP16.58■□□□□ 0.24
DDX54-201ENST00000306014 PDE3AQ14432 1141 aa16.58■□□□□ 0.24
DDX54-201ENST00000306014 CAMSAP2Q08AD1 1489 aa16.58■□□□□ 0.24
DDX54-201ENST00000306014 RIPK4P57078 832 aa16.57■□□□□ 0.24
DDX54-201ENST00000306014 PDZRN3Q9UPQ7 1066 aa16.57■□□□□ 0.24
DDX54-201ENST00000306014 MINK1Q8N4C8 1332 aaPredicted RBP16.57■□□□□ 0.24
DDX54-201ENST00000306014 KCNJ4P48050 445 aa16.56■□□□□ 0.24
DDX54-201ENST00000306014 ADAMTS12P58397 1594 aa16.56■□□□□ 0.24
DDX54-201ENST00000306014 SLC4A10Q6U841 1118 aa16.56■□□□□ 0.24
DDX54-201ENST00000306014 DDX49Q9Y6V7 483 aaKnown RBP16.56■□□□□ 0.24
DDX54-201ENST00000306014 VGFO15240 615 aaPredicted RBP16.55■□□□□ 0.24
DDX54-201ENST00000306014 NOL8Q76FK4 1167 aaKnown RBP16.55■□□□□ 0.24
DDX54-201ENST00000306014 SLFN5Q08AF3 891 aa16.54■□□□□ 0.24
DDX54-201ENST00000306014 FOXD4L5Q5VV16 416 aaPredicted RBP16.54■□□□□ 0.24
DDX54-201ENST00000306014 FOXD4L4Q8WXT5 416 aaPredicted RBP16.54■□□□□ 0.24
DDX54-201ENST00000306014 SLC12A5Q9H2X9 1139 aa16.54■□□□□ 0.24
DDX54-201ENST00000306014 GGNBP2Q9H3C7 697 aa16.54■□□□□ 0.24
DDX54-201ENST00000306014 ARID3AQ99856 593 aa16.54■□□□□ 0.24
DDX54-201ENST00000306014 UGGT2Q9NYU1 1516 aa16.53■□□□□ 0.24
DDX54-201ENST00000306014 DIAPH1O60610 1272 aaKnown RBP16.52■□□□□ 0.24
DDX54-201ENST00000306014 PLEKHH2Q8IVE3 1493 aa16.52■□□□□ 0.24
DDX54-201ENST00000306014 RAPGEF3O95398 923 aa16.52■□□□□ 0.24
DDX54-201ENST00000306014 THOC2Q8NI27 1593 aaKnown RBP16.52■□□□□ 0.23
DDX54-201ENST00000306014 SCAPERQ9BY12 1400 aa16.52■□□□□ 0.23
DDX54-201ENST00000306014 AAMPQ13685 434 aa16.52■□□□□ 0.23
DDX54-201ENST00000306014 ARHGEF11O15085 1522 aa16.51■□□□□ 0.23
DDX54-201ENST00000306014 TRIM6-TRIM34B2RNG4 842 aa16.51■□□□□ 0.23
DDX54-201ENST00000306014 CABP2Q9NPB3 220 aa16.51■□□□□ 0.23
DDX54-201ENST00000306014 CFAP43Q8NDM7 1665 aa16.5■□□□□ 0.23
DDX54-201ENST00000306014 ST18O60284 1047 aa16.5■□□□□ 0.23
DDX54-201ENST00000306014 HMMRO75330 724 aa16.5■□□□□ 0.23
DDX54-201ENST00000306014 LMOD3Q0VAK6 560 aa16.5■□□□□ 0.23
DDX54-201ENST00000306014 TSR2Q969E8 191 aaKnown RBP16.5■□□□□ 0.23
DDX54-201ENST00000306014 EXOSC9Q06265 439 aaKnown RBP16.49■□□□□ 0.23
DDX54-201ENST00000306014 EID1Q9Y6B2 187 aa16.49■□□□□ 0.23
DDX54-201ENST00000306014 NUTM2FA1L443 756 aa16.48■□□□□ 0.23
DDX54-201ENST00000306014 GOLGA6L4A6NEF3 574 aa16.48■□□□□ 0.23
DDX54-201ENST00000306014 HSP90AA2PQ14568 343 aaPredicted RBP16.48■□□□□ 0.23
DDX54-201ENST00000306014 SKOR2Q2VWA4 1001 aaPredicted RBP16.48■□□□□ 0.23
DDX54-201ENST00000306014 DUSP27Q5VZP5 1158 aa16.48■□□□□ 0.23
DDX54-201ENST00000306014 LMOD2Q6P5Q4 547 aa16.48■□□□□ 0.23
DDX54-201ENST00000306014 KIF16BQ96L93 1317 aa16.48■□□□□ 0.23
DDX54-201ENST00000306014 STK31Q9BXU1 1019 aa16.48■□□□□ 0.23
DDX54-201ENST00000306014 TRAK2O60296 914 aa16.47■□□□□ 0.23
DDX54-201ENST00000306014 FGD1P98174 961 aa16.47■□□□□ 0.23
DDX54-201ENST00000306014 KIAA1211Q6ZU35 1233 aa16.47■□□□□ 0.23
DDX54-201ENST00000306014 WWC1Q8IX03 1113 aa16.47■□□□□ 0.23
DDX54-201ENST00000306014 ZRSR1Q15695 479 aaKnown RBP16.47■□□□□ 0.23
DDX54-201ENST00000306014 CD109Q6YHK3 1445 aa16.46■□□□□ 0.23
DDX54-201ENST00000306014 ABCA5Q8WWZ7 1642 aa16.46■□□□□ 0.23
DDX54-201ENST00000306014 HMOX1P09601 288 aa16.46■□□□□ 0.23
DDX54-201ENST00000306014 FOXD4L6Q3SYB3 417 aaPredicted RBP16.45■□□□□ 0.22
DDX54-201ENST00000306014 FOXD4L3Q6VB84 417 aaPredicted RBP16.45■□□□□ 0.22
DDX54-201ENST00000306014 NUP160Q12769 1436 aa16.45■□□□□ 0.22
DDX54-201ENST00000306014 DISP3Q9P2K9 1392 aa16.45■□□□□ 0.22
DDX54-201ENST00000306014 SYAP1Q96A49 352 aaPredicted RBP16.44■□□□□ 0.22
DDX54-201ENST00000306014 DHX29Q7Z478 1369 aaKnown RBP16.44■□□□□ 0.22
DDX54-201ENST00000306014 TAOK2Q9UL54 1235 aa16.44■□□□□ 0.22
DDX54-201ENST00000306014 KIAA2012Q0VF49 1180 aa16.44■□□□□ 0.22
DDX54-201ENST00000306014 TARBP1Q13395 1621 aaKnown RBP16.43■□□□□ 0.22
DDX54-201ENST00000306014 CTTNBP2Q8WZ74 1663 aa16.43■□□□□ 0.22
DDX54-201ENST00000306014 NAP1L2Q9ULW6 460 aaPredicted RBP16.42■□□□□ 0.22
DDX54-201ENST00000306014 CHAF1AQ13111 956 aaPredicted RBP16.42■□□□□ 0.22
DDX54-201ENST00000306014 ATP10BO94823 1461 aa16.42■□□□□ 0.22
DDX54-201ENST00000306014 MRE11P49959 708 aa16.42■□□□□ 0.22
DDX54-201ENST00000306014 CCDC141Q6ZP82 1450 aa16.41■□□□□ 0.22
DDX54-201ENST00000306014 MVPQ14764 893 aaKnown RBP16.41■□□□□ 0.22
DDX54-201ENST00000306014 RILPL2Q969X0 211 aa16.41■□□□□ 0.22
DDX54-201ENST00000306014 NOB1Q9ULX3 412 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms