RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 TMEM94Q12767 1356 aa11.53□□□□□ -0.56
TM4SF1-201ENST00000305366 ERICH6Q7L0X2 663 aa11.53□□□□□ -0.56
TM4SF1-201ENST00000305366 ZC3H13Q5T200 1668 aaKnown RBP11.53□□□□□ -0.56
TM4SF1-201ENST00000305366 ANKRD50Q9ULJ7 1429 aa11.52□□□□□ -0.56
TM4SF1-201ENST00000305366 PRDM15P57071 1507 aaPredicted RBP11.52□□□□□ -0.57
TM4SF1-201ENST00000305366 ARHGAP23Q9P227 1491 aa11.52□□□□□ -0.57
TM4SF1-201ENST00000305366 SLIT1O75093 1534 aa11.51□□□□□ -0.57
TM4SF1-201ENST00000305366 HDGFP51858 240 aaKnown RBP11.5□□□□□ -0.57
TM4SF1-201ENST00000305366 C14orf37Q86TY3 774 aa11.5□□□□□ -0.57
TM4SF1-201ENST00000305366 ALKQ9UM73 1620 aa11.5□□□□□ -0.57
TM4SF1-201ENST00000305366 MED1Q15648 1581 aaPredicted RBP11.5□□□□□ -0.57
TM4SF1-201ENST00000305366 EFCAB6Q5THR3 1501 aa11.49□□□□□ -0.57
TM4SF1-201ENST00000305366 UBR1Q8IWV7 1749 aa11.49□□□□□ -0.57
TM4SF1-201ENST00000305366 PIK3C2BO00750 1634 aa11.49□□□□□ -0.57
TM4SF1-201ENST00000305366 NOS1P29475 1434 aa11.49□□□□□ -0.57
TM4SF1-201ENST00000305366 STRCP1A6NGW2 1772 aa11.48□□□□□ -0.57
TM4SF1-201ENST00000305366 SLAIN2Q9P270 581 aa11.47□□□□□ -0.57
TM4SF1-201ENST00000305366 LMTK2Q8IWU2 1503 aa11.47□□□□□ -0.57
TM4SF1-201ENST00000305366 NUP155O75694 1391 aa11.47□□□□□ -0.57
TM4SF1-201ENST00000305366 CROCC2H7BZ55 1655 aa11.46□□□□□ -0.57
TM4SF1-201ENST00000305366 RIMS2Q9UQ26 1411 aa11.46□□□□□ -0.57
TM4SF1-201ENST00000305366 ADRA2BP18089 450 aa11.46□□□□□ -0.58
TM4SF1-201ENST00000305366 RGS17Q9UGC6 210 aaPredicted RBP11.46□□□□□ -0.58
TM4SF1-201ENST00000305366 ADGRL2O95490 1459 aa11.46□□□□□ -0.58
TM4SF1-201ENST00000305366 SYNMO15061 1565 aa11.46□□□□□ -0.58
TM4SF1-201ENST00000305366 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.45□□□□□ -0.58
TM4SF1-201ENST00000305366 MSH6P52701 1360 aa11.44□□□□□ -0.58
TM4SF1-201ENST00000305366 ZNF326Q5BKZ1 582 aaKnown RBP11.44□□□□□ -0.58
TM4SF1-201ENST00000305366 FAM135BQ49AJ0 1406 aa11.44□□□□□ -0.58
TM4SF1-201ENST00000305366 RRBP1Q9P2E9 1410 aaKnown RBP11.44□□□□□ -0.58
TM4SF1-201ENST00000305366 DIEXFQ68CQ4 756 aaKnown RBP11.44□□□□□ -0.58
TM4SF1-201ENST00000305366 TBX22Q9Y458 520 aa11.44□□□□□ -0.58
TM4SF1-201ENST00000305366 CLSPNQ9HAW4 1339 aa11.43□□□□□ -0.58
TM4SF1-201ENST00000305366 PLEKHG1Q9ULL1 1385 aa11.43□□□□□ -0.58
TM4SF1-201ENST00000305366 POTEAQ6S8J7 498 aa11.42□□□□□ -0.58
TM4SF1-201ENST00000305366 TET3O43151 1660 aa11.42□□□□□ -0.58
TM4SF1-201ENST00000305366 ADGRB3O60242 1522 aa11.42□□□□□ -0.58
TM4SF1-201ENST00000305366 ZNF316A6NFI3 1004 aaPredicted RBP11.41□□□□□ -0.58
TM4SF1-201ENST00000305366 AMOTL2Q9Y2J4 779 aa11.41□□□□□ -0.58
TM4SF1-201ENST00000305366 ATF3P18847 181 aa11.41□□□□□ -0.58
TM4SF1-201ENST00000305366 ARXQ96QS3 562 aa11.41□□□□□ -0.58
TM4SF1-201ENST00000305366 ZFYVE9O95405 1425 aa11.4□□□□□ -0.58
TM4SF1-201ENST00000305366 RPRD2Q5VT52 1461 aaKnown RBP11.4□□□□□ -0.58
TM4SF1-201ENST00000305366 ROCK1Q13464 1354 aa11.4□□□□□ -0.59
TM4SF1-201ENST00000305366 TRIM52Q96A61 297 aa11.39□□□□□ -0.59
TM4SF1-201ENST00000305366 MEX3CQ5U5Q3 659 aaKnown RBP11.39□□□□□ -0.59
TM4SF1-201ENST00000305366 C19orf44Q9H6X5 657 aa11.39□□□□□ -0.59
TM4SF1-201ENST00000305366 NUTM2BA6NNL0 878 aaPredicted RBP11.37□□□□□ -0.59
TM4SF1-201ENST00000305366 NUTM2EB1AL46 878 aaPredicted RBP11.37□□□□□ -0.59
TM4SF1-201ENST00000305366 CADPS2Q86UW7 1296 aa11.37□□□□□ -0.59
TM4SF1-201ENST00000305366 NUTM2AQ8IVF1 878 aaPredicted RBP11.37□□□□□ -0.59
TM4SF1-201ENST00000305366 NKTRP30414 1462 aaKnown RBP11.36□□□□□ -0.59
TM4SF1-201ENST00000305366 ADAMTS13Q76LX8 1427 aa11.36□□□□□ -0.59
TM4SF1-201ENST00000305366 PRKCSHP14314 528 aaPredicted RBP11.35□□□□□ -0.59
TM4SF1-201ENST00000305366 DHX57Q6P158 1386 aaKnown RBP11.34□□□□□ -0.59
TM4SF1-201ENST00000305366 JCADQ9P266 1359 aa11.34□□□□□ -0.59
TM4SF1-201ENST00000305366 DDX17Q92841 729 aaKnown RBP11.33□□□□□ -0.59
TM4SF1-201ENST00000305366 TMEM131LA2VDJ0 1609 aa11.33□□□□□ -0.6
TM4SF1-201ENST00000305366 XIRP1Q702N8 1843 aaKnown RBP11.33□□□□□ -0.6
TM4SF1-201ENST00000305366 PTPRUQ92729 1446 aa11.33□□□□□ -0.6
TM4SF1-201ENST00000305366 ROBO1Q9Y6N7 1651 aa11.33□□□□□ -0.6
TM4SF1-201ENST00000305366 BRINP3Q76B58 766 aa11.33□□□□□ -0.6
TM4SF1-201ENST00000305366 ACIN1Q9UKV3 1341 aaKnown RBP11.32□□□□□ -0.6
TM4SF1-201ENST00000305366 KDM5AP29375 1690 aaKnown RBP11.32□□□□□ -0.6
TM4SF1-201ENST00000305366 METP08581 1390 aa11.32□□□□□ -0.6
TM4SF1-201ENST00000305366 UNC13BO14795 1591 aa11.31□□□□□ -0.6
TM4SF1-201ENST00000305366 SLC4A1APQ9BWU0 796 aaKnown RBP11.31□□□□□ -0.6
TM4SF1-201ENST00000305366 NWD1Q149M9 1564 aa11.3□□□□□ -0.6
TM4SF1-201ENST00000305366 PIK3R4Q99570 1358 aa11.3□□□□□ -0.6
TM4SF1-201ENST00000305366 E9PCH4 1651 aa11.3□□□□□ -0.6
TM4SF1-201ENST00000305366 GCC2Q8IWJ2 1684 aa11.3□□□□□ -0.6
TM4SF1-201ENST00000305366 NCOA3Q9Y6Q9 1424 aa11.29□□□□□ -0.6
TM4SF1-201ENST00000305366 CENPBP07199 599 aaPredicted RBP11.29□□□□□ -0.6
TM4SF1-201ENST00000305366 SPATA31A6Q5VVP1 1343 aa11.28□□□□□ -0.6
TM4SF1-201ENST00000305366 ZNF772Q68DY9 489 aaPredicted RBP11.28□□□□□ -0.6
TM4SF1-201ENST00000305366 RNF39Q9H2S5 420 aa11.28□□□□□ -0.6
TM4SF1-201ENST00000305366 IQGAP3Q86VI3 1631 aa11.27□□□□□ -0.6
TM4SF1-201ENST00000305366 VGFO15240 615 aaPredicted RBP11.27□□□□□ -0.61
TM4SF1-201ENST00000305366 RGL3Q3MIN7 710 aa11.27□□□□□ -0.61
TM4SF1-201ENST00000305366 MYO5BQ9ULV0 1848 aa11.27□□□□□ -0.61
TM4SF1-201ENST00000305366 TRPM2O94759 1503 aa11.26□□□□□ -0.61
TM4SF1-201ENST00000305366 NAIPQ13075 1403 aa11.26□□□□□ -0.61
TM4SF1-201ENST00000305366 RXRBP28702 533 aa11.26□□□□□ -0.61
TM4SF1-201ENST00000305366 NEUROD1Q13562 356 aa11.26□□□□□ -0.61
TM4SF1-201ENST00000305366 LRRC59Q96AG4 307 aaKnown RBP11.26□□□□□ -0.61
TM4SF1-201ENST00000305366 C8orf37Q96NL8 207 aa11.26□□□□□ -0.61
TM4SF1-201ENST00000305366 STK26Q9P289 416 aa11.26□□□□□ -0.61
TM4SF1-201ENST00000305366 PHLPP1O60346 1717 aa11.26□□□□□ -0.61
TM4SF1-201ENST00000305366 LRP6O75581 1613 aa11.25□□□□□ -0.61
TM4SF1-201ENST00000305366 ADAMTS2O95450 1211 aa11.25□□□□□ -0.61
TM4SF1-201ENST00000305366 ORAI2Q96SN7 254 aa11.25□□□□□ -0.61
TM4SF1-201ENST00000305366 CHD2O14647 1828 aaKnown RBP11.25□□□□□ -0.61
TM4SF1-201ENST00000305366 NUTM2FA1L443 756 aa11.23□□□□□ -0.61
TM4SF1-201ENST00000305366 AFF2P51816 1311 aa11.23□□□□□ -0.61
TM4SF1-201ENST00000305366 DIP2AQ14689 1571 aa11.23□□□□□ -0.61
TM4SF1-201ENST00000305366 MST1RQ04912 1400 aa11.22□□□□□ -0.61
TM4SF1-201ENST00000305366 NGLY1Q96IV0 654 aa11.22□□□□□ -0.61
TM4SF1-201ENST00000305366 QTRT2Q9H974 415 aaKnown RBP11.22□□□□□ -0.61
TM4SF1-201ENST00000305366 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.22□□□□□ -0.61
TM4SF1-201ENST00000305366 ROBO2Q9HCK4 1378 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms