RNA–Protein interactions for RNA: ENST00000304858.6

HSPA4-201, Transcript of heat shock protein family A (Hsp70) member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPA4, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA4-201ENST00000304858 G3V3G9 751 aa15.3■□□□□ 0.04
HSPA4-201ENST00000304858 ATF3P18847 181 aa15.3■□□□□ 0.04
HSPA4-201ENST00000304858 DCAF8Q5TAQ9 597 aa15.3■□□□□ 0.04
HSPA4-201ENST00000304858 ZRSR1Q15695 479 aaKnown RBP15.3■□□□□ 0.04
HSPA4-201ENST00000304858 RPRD2Q5VT52 1461 aaKnown RBP15.29■□□□□ 0.04
HSPA4-201ENST00000304858 MSH5O43196 834 aa15.29■□□□□ 0.04
HSPA4-201ENST00000304858 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.29■□□□□ 0.04
HSPA4-201ENST00000304858 RWDD1Q9H446 243 aaPredicted RBP15.29■□□□□ 0.04
HSPA4-201ENST00000304858 E9PSI1 815 aa15.29■□□□□ 0.04
HSPA4-201ENST00000304858 STK31Q9BXU1 1019 aa15.29■□□□□ 0.04
HSPA4-201ENST00000304858 CENPQQ7L2Z9 268 aaPredicted RBP15.29■□□□□ 0.04
HSPA4-201ENST00000304858 NAP1L2Q9ULW6 460 aaPredicted RBP15.28■□□□□ 0.04
HSPA4-201ENST00000304858 MFAP1P55081 439 aaKnown RBP15.28■□□□□ 0.04
HSPA4-201ENST00000304858 PANK1Q8TE04 598 aa15.27■□□□□ 0.04
HSPA4-201ENST00000304858 MAGI1Q96QZ7 1491 aaPredicted RBP15.27■□□□□ 0.04
HSPA4-201ENST00000304858 PSME1Q06323 249 aa15.27■□□□□ 0.03
HSPA4-201ENST00000304858 SLC12A5Q9H2X9 1139 aa15.27■□□□□ 0.03
HSPA4-201ENST00000304858 CABP2Q9NPB3 220 aa15.27■□□□□ 0.03
HSPA4-201ENST00000304858 TAF7LQ5H9L4 462 aa15.26■□□□□ 0.03
HSPA4-201ENST00000304858 UGGT2Q9NYU1 1516 aa15.26■□□□□ 0.03
HSPA4-201ENST00000304858 CGNL1Q0VF96 1302 aa15.26■□□□□ 0.03
HSPA4-201ENST00000304858 IPO8O15397 1037 aaKnown RBP15.26■□□□□ 0.03
HSPA4-201ENST00000304858 GGNBP2Q9H3C7 697 aa15.26■□□□□ 0.03
HSPA4-201ENST00000304858 HSP90AB1P08238 724 aaKnown RBP15.26■□□□□ 0.03
HSPA4-201ENST00000304858 SCAPERQ9BY12 1400 aa15.25■□□□□ 0.03
HSPA4-201ENST00000304858 GZF1Q9H116 711 aaPredicted RBP15.25■□□□□ 0.03
HSPA4-201ENST00000304858 FAM161AQ3B820 660 aa15.24■□□□□ 0.03
HSPA4-201ENST00000304858 HDAC5Q9UQL6 1122 aa15.24■□□□□ 0.03
HSPA4-201ENST00000304858 EVC2Q86UK5 1308 aa15.24■□□□□ 0.03
HSPA4-201ENST00000304858 SMG6Q86US8 1419 aaKnown RBP15.24■□□□□ 0.03
HSPA4-201ENST00000304858 MTHFSP49914 203 aa15.24■□□□□ 0.03
HSPA4-201ENST00000304858 PMFBP1Q8TBY8 1022 aa15.23■□□□□ 0.03
HSPA4-201ENST00000304858 CHMP3Q9Y3E7 222 aa15.23■□□□□ 0.03
HSPA4-201ENST00000304858 GOLGA6L22H0YM25 854 aa15.23■□□□□ 0.03
HSPA4-201ENST00000304858 BCAR3O75815 825 aa15.23■□□□□ 0.03
HSPA4-201ENST00000304858 COG3Q96JB2 828 aa15.23■□□□□ 0.03
HSPA4-201ENST00000304858 GPATCH8Q9UKJ3 1502 aaKnown RBP15.23■□□□□ 0.03
HSPA4-201ENST00000304858 GORABQ5T7V8 394 aa15.23■□□□□ 0.03
HSPA4-201ENST00000304858 HSCBQ8IWL3 235 aa15.22■□□□□ 0.03
HSPA4-201ENST00000304858 NUP153P49790 1475 aaKnown RBP15.21■□□□□ 0.03
HSPA4-201ENST00000304858 ERBINQ96RT1 1412 aa15.21■□□□□ 0.03
HSPA4-201ENST00000304858 LMOD3Q0VAK6 560 aa15.2■□□□□ 0.02
HSPA4-201ENST00000304858 TCP11L2Q8N4U5 519 aa15.2■□□□□ 0.02
HSPA4-201ENST00000304858 C1orf141Q5JVX7 400 aa15.2■□□□□ 0.02
HSPA4-201ENST00000304858 C20orf194Q5TEA3 1177 aa15.19■□□□□ 0.02
HSPA4-201ENST00000304858 FOXD4L1Q9NU39 408 aa15.19■□□□□ 0.02
HSPA4-201ENST00000304858 RUNDC1Q96C34 613 aa15.18■□□□□ 0.02
HSPA4-201ENST00000304858 CFAP43Q8NDM7 1665 aa15.18■□□□□ 0.02
HSPA4-201ENST00000304858 SYTL4Q96C24 671 aaPredicted RBP15.18■□□□□ 0.02
HSPA4-201ENST00000304858 CCDC141Q6ZP82 1450 aa15.18■□□□□ 0.02
HSPA4-201ENST00000304858 RAPGEF3O95398 923 aa15.18■□□□□ 0.02
HSPA4-201ENST00000304858 ZKSCAN2Q63HK3 967 aa15.18■□□□□ 0.02
HSPA4-201ENST00000304858 FRAT2O75474 233 aaPredicted RBP15.17■□□□□ 0.02
HSPA4-201ENST00000304858 PROSER2Q86WR7 435 aaPredicted RBP15.17■□□□□ 0.02
HSPA4-201ENST00000304858 RIPK4P57078 832 aa15.17■□□□□ 0.02
HSPA4-201ENST00000304858 TEFQ10587 303 aa15.17■□□□□ 0.02
HSPA4-201ENST00000304858 CTTNBP2Q8WZ74 1663 aa15.16■□□□□ 0.02
HSPA4-201ENST00000304858 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
HSPA4-201ENST00000304858 HMOX1P09601 288 aa15.16■□□□□ 0.02
HSPA4-201ENST00000304858 TXNDC2Q86VQ3 553 aa15.16■□□□□ 0.02
HSPA4-201ENST00000304858 PLEKHH2Q8IVE3 1493 aa15.16■□□□□ 0.02
HSPA4-201ENST00000304858 TRIM44Q96DX7 344 aaPredicted RBP15.15■□□□□ 0.02
HSPA4-201ENST00000304858 SLC4A10Q6U841 1118 aa15.15■□□□□ 0.02
HSPA4-201ENST00000304858 THEMISQ8N1K5 641 aaPredicted RBP15.14■□□□□ 0.01
HSPA4-201ENST00000304858 DIAPH1O60610 1272 aaKnown RBP15.13■□□□□ 0.01
HSPA4-201ENST00000304858 DISP3Q9P2K9 1392 aa15.13■□□□□ 0.01
HSPA4-201ENST00000304858 TTC5Q8N0Z6 440 aa15.13■□□□□ 0.01
HSPA4-201ENST00000304858 TSR2Q969E8 191 aaKnown RBP15.13■□□□□ 0.01
HSPA4-201ENST00000304858 STAC3Q96MF2 364 aa15.13■□□□□ 0.01
HSPA4-201ENST00000304858 ATP10BO94823 1461 aa15.13■□□□□ 0.01
HSPA4-201ENST00000304858 DZIP1LQ8IYY4 767 aaKnown RBP15.12■□□□□ 0.01
HSPA4-201ENST00000304858 KLHL34Q8N239 644 aa15.12■□□□□ 0.01
HSPA4-201ENST00000304858 ANKRD45Q5TZF3 282 aa15.12■□□□□ 0.01
HSPA4-201ENST00000304858 KIAA1211Q6ZU35 1233 aa15.12■□□□□ 0.01
HSPA4-201ENST00000304858 MCCP23508 829 aa15.11■□□□□ 0.01
HSPA4-201ENST00000304858 BACH2Q9BYV9 841 aa15.11■□□□□ 0.01
HSPA4-201ENST00000304858 ADGRF5Q8IZF2 1346 aa15.11■□□□□ 0.01
HSPA4-201ENST00000304858 MAGI3Q5TCQ9 1506 aa15.1■□□□□ 0.01
HSPA4-201ENST00000304858 TCOF1Q13428 1488 aaKnown RBP15.1■□□□□ 0.01
HSPA4-201ENST00000304858 KIF14Q15058 1648 aa15.1■□□□□ 0.01
HSPA4-201ENST00000304858 RAPGEF4Q8WZA2 1011 aa15.09■□□□□ 0.01
HSPA4-201ENST00000304858 PRAM1Q96QH2 718 aa15.09■□□□□ 0.01
HSPA4-201ENST00000304858 RAPGEF6Q8TEU7 1601 aa15.09■□□□□ 0.01
HSPA4-201ENST00000304858 CFAP44Q96MT7 982 aa15.08■□□□□ 0
HSPA4-201ENST00000304858 WDR62O43379 1518 aa15.08■□□□□ 0
HSPA4-201ENST00000304858 LNPKQ9C0E8 428 aa15.08■□□□□ 0
HSPA4-201ENST00000304858 EXOSC9Q06265 439 aaKnown RBP15.08■□□□□ 0
HSPA4-201ENST00000304858 NLRP2Q9NX02 1062 aa15.07■□□□□ 0
HSPA4-201ENST00000304858 HMMRO75330 724 aa15.07■□□□□ 0
HSPA4-201ENST00000304858 CLSTN1O94985 981 aa15.07■□□□□ 0
HSPA4-201ENST00000304858 SF3B2Q13435 895 aaKnown RBP15.07■□□□□ 0
HSPA4-201ENST00000304858 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.06■□□□□ 0
HSPA4-201ENST00000304858 SLFN5Q08AF3 891 aa15.05■□□□□ 0
HSPA4-201ENST00000304858 ANKLE2Q86XL3 938 aa15.05■□□□□ 0
HSPA4-201ENST00000304858 NECTIN2Q92692 538 aa15.05■□□□□ -0
HSPA4-201ENST00000304858 GPATCH3Q96I76 525 aa15.05■□□□□ -0
HSPA4-201ENST00000304858 POGZQ7Z3K3 1410 aa15.05■□□□□ -0
HSPA4-201ENST00000304858 GOLGA6L4A6NEF3 574 aa15.05■□□□□ -0
HSPA4-201ENST00000304858 NFKBIBQ15653 356 aa15.05■□□□□ -0
HSPA4-201ENST00000304858 NOL8Q76FK4 1167 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 218.3 ms