RNA–Protein interactions for RNA: ENST00000304457.11

EXOSC10-201, Transcript of exosome component 10, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXOSC10, Length 2,721 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC10-201ENST00000304457 CDC42BPAQ5VT25 1732 aa13.24□□□□□ -0.29
EXOSC10-201ENST00000304457 ROBO1Q9Y6N7 1651 aa13.24□□□□□ -0.29
EXOSC10-201ENST00000304457 MIA2Q96PC5 1412 aa13.23□□□□□ -0.29
EXOSC10-201ENST00000304457 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
EXOSC10-201ENST00000304457 CCDC18Q5T9S5 1454 aa13.23□□□□□ -0.29
EXOSC10-201ENST00000304457 RTEL1-TNFRSF6BF6WH68 1400 aa13.22□□□□□ -0.29
EXOSC10-201ENST00000304457 PKNOX2Q96KN3 472 aa13.21□□□□□ -0.29
EXOSC10-201ENST00000304457 SHPRHQ149N8 1683 aa13.21□□□□□ -0.3
EXOSC10-201ENST00000304457 PHLPP1O60346 1717 aa13.2□□□□□ -0.3
EXOSC10-201ENST00000304457 TONSLQ96HA7 1378 aa13.2□□□□□ -0.3
EXOSC10-201ENST00000304457 SYCP2Q9BX26 1530 aa13.19□□□□□ -0.3
EXOSC10-201ENST00000304457 HNRNPUQ00839 825 aaKnown RBP eCLIP13.19□□□□□ -0.3
EXOSC10-201ENST00000304457 DHX37Q8IY37 1157 aaKnown RBP13.19□□□□□ -0.3
EXOSC10-201ENST00000304457 SLIT1O75093 1534 aa13.19□□□□□ -0.3
EXOSC10-201ENST00000304457 ARHGAP23Q9P227 1491 aa13.19□□□□□ -0.3
EXOSC10-201ENST00000304457 NKTRP30414 1462 aaKnown RBP13.18□□□□□ -0.3
EXOSC10-201ENST00000304457 SCAF11Q99590 1463 aaKnown RBP13.18□□□□□ -0.3
EXOSC10-201ENST00000304457 LRP5O75197 1615 aa13.17□□□□□ -0.3
EXOSC10-201ENST00000304457 CHIC2Q9UKJ5 165 aa13.17□□□□□ -0.3
EXOSC10-201ENST00000304457 CAMSAP2Q08AD1 1489 aa13.16□□□□□ -0.3
EXOSC10-201ENST00000304457 COL16A1Q07092 1604 aaPredicted RBP13.16□□□□□ -0.3
EXOSC10-201ENST00000304457 NWD1Q149M9 1564 aa13.16□□□□□ -0.3
EXOSC10-201ENST00000304457 DHX29Q7Z478 1369 aaKnown RBP13.15□□□□□ -0.3
EXOSC10-201ENST00000304457 RXRBP28702 533 aa13.15□□□□□ -0.3
EXOSC10-201ENST00000304457 KDM5AP29375 1690 aaKnown RBP13.15□□□□□ -0.31
EXOSC10-201ENST00000304457 MAP3K1Q13233 1512 aa13.14□□□□□ -0.31
EXOSC10-201ENST00000304457 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
EXOSC10-201ENST00000304457 RRP7BPQ9NSQ0 103 aa13.14□□□□□ -0.31
EXOSC10-201ENST00000304457 AHDC1Q5TGY3 1603 aaPredicted RBP13.14□□□□□ -0.31
EXOSC10-201ENST00000304457 NCOA3Q9Y6Q9 1424 aa13.14□□□□□ -0.31
EXOSC10-201ENST00000304457 UBR1Q8IWV7 1749 aa13.13□□□□□ -0.31
EXOSC10-201ENST00000304457 CNGB1Q14028 1251 aaPredicted RBP13.13□□□□□ -0.31
EXOSC10-201ENST00000304457 ANO8Q9HCE9 1232 aaPredicted RBP13.13□□□□□ -0.31
EXOSC10-201ENST00000304457 ZRANB1Q9UGI0 708 aa13.13□□□□□ -0.31
EXOSC10-201ENST00000304457 GGT6Q6P531 493 aa13.12□□□□□ -0.31
EXOSC10-201ENST00000304457 MTUS2Q5JR59 1369 aa13.11□□□□□ -0.31
EXOSC10-201ENST00000304457 CCDC184Q52MB2 194 aa13.11□□□□□ -0.31
EXOSC10-201ENST00000304457 PRDM15P57071 1507 aaPredicted RBP13.11□□□□□ -0.31
EXOSC10-201ENST00000304457 LRRIQ1Q96JM4 1722 aa13.11□□□□□ -0.31
EXOSC10-201ENST00000304457 PPP4R2Q9NY27 417 aa13.11□□□□□ -0.31
EXOSC10-201ENST00000304457 ATAD2Q6PL18 1390 aa13.1□□□□□ -0.31
EXOSC10-201ENST00000304457 LRP6O75581 1613 aa13.1□□□□□ -0.31
EXOSC10-201ENST00000304457 CCDC125Q86Z20 511 aa13.1□□□□□ -0.31
EXOSC10-201ENST00000304457 NOP58Q9Y2X3 529 aaKnown RBP13.1□□□□□ -0.31
EXOSC10-201ENST00000304457 GPATCH8Q9UKJ3 1502 aaKnown RBP13.09□□□□□ -0.31
EXOSC10-201ENST00000304457 HSPA5P11021 654 aaKnown RBP13.08□□□□□ -0.32
EXOSC10-201ENST00000304457 FAM9BQ8IZU0 186 aa13.07□□□□□ -0.32
EXOSC10-201ENST00000304457 ERVK-7P63135 1459 aa13.07□□□□□ -0.32
EXOSC10-201ENST00000304457 SENP3-EIF4A1A0A087X0R7 540 aa13.07□□□□□ -0.32
EXOSC10-201ENST00000304457 TMEM94Q12767 1356 aa13.07□□□□□ -0.32
EXOSC10-201ENST00000304457 MSH6P52701 1360 aa13.06□□□□□ -0.32
EXOSC10-201ENST00000304457 KCNA6P17658 529 aa13.06□□□□□ -0.32
EXOSC10-201ENST00000304457 CASKIN1Q8WXD9 1431 aa13.06□□□□□ -0.32
EXOSC10-201ENST00000304457 WASHC2AQ641Q2 1341 aa13.06□□□□□ -0.32
EXOSC10-201ENST00000304457 MEX3CQ5U5Q3 659 aaKnown RBP13.06□□□□□ -0.32
EXOSC10-201ENST00000304457 NCOA2Q15596 1464 aa13.05□□□□□ -0.32
EXOSC10-201ENST00000304457 EIF2AK4Q9P2K8 1649 aaKnown RBP13.05□□□□□ -0.32
EXOSC10-201ENST00000304457 RGS12O14924 1447 aa13.04□□□□□ -0.32
EXOSC10-201ENST00000304457 BCL11BQ9C0K0 894 aaPredicted RBP13.04□□□□□ -0.32
EXOSC10-201ENST00000304457 FBXO31Q5XUX0 539 aaPredicted RBP13.04□□□□□ -0.32
EXOSC10-201ENST00000304457 NHSL1Q5SYE7 1610 aa13.03□□□□□ -0.32
EXOSC10-201ENST00000304457 C11orf95C9JLR9 678 aaPredicted RBP13.03□□□□□ -0.32
EXOSC10-201ENST00000304457 RBM6P78332 1123 aaKnown RBP13.03□□□□□ -0.32
EXOSC10-201ENST00000304457 FYCO1Q9BQS8 1478 aa13.03□□□□□ -0.32
EXOSC10-201ENST00000304457 DIP2AQ14689 1571 aa13.03□□□□□ -0.32
EXOSC10-201ENST00000304457 SALL2Q9Y467 1007 aaPredicted RBP13.02□□□□□ -0.32
EXOSC10-201ENST00000304457 EID1Q9Y6B2 187 aa13.02□□□□□ -0.32
EXOSC10-201ENST00000304457 WASHC2CQ9Y4E1 1318 aa13.02□□□□□ -0.33
EXOSC10-201ENST00000304457 SETBP1Q9Y6X0 1596 aa13.02□□□□□ -0.33
EXOSC10-201ENST00000304457 TAF7LQ5H9L4 462 aa13.02□□□□□ -0.33
EXOSC10-201ENST00000304457 RSPH4AQ5TD94 716 aa13.02□□□□□ -0.33
EXOSC10-201ENST00000304457 SENP3Q9H4L4 574 aaPredicted RBP13.02□□□□□ -0.33
EXOSC10-201ENST00000304457 NAIPQ13075 1403 aa13.02□□□□□ -0.33
EXOSC10-201ENST00000304457 MROH1Q8NDA8 1641 aa13.01□□□□□ -0.33
EXOSC10-201ENST00000304457 B4GALNT3Q6L9W6 998 aa13.01□□□□□ -0.33
EXOSC10-201ENST00000304457 MBD5Q9P267 1494 aa13.01□□□□□ -0.33
EXOSC10-201ENST00000304457 ARHGAP31Q2M1Z3 1444 aa13□□□□□ -0.33
EXOSC10-201ENST00000304457 TET3O43151 1660 aa13□□□□□ -0.33
EXOSC10-201ENST00000304457 HFM1A2PYH4 1435 aa13□□□□□ -0.33
EXOSC10-201ENST00000304457 BRD2P25440 801 aaKnown RBP12.99□□□□□ -0.33
EXOSC10-201ENST00000304457 L3MBTL2Q969R5 705 aa12.99□□□□□ -0.33
EXOSC10-201ENST00000304457 SLAIN2Q9P270 581 aa12.99□□□□□ -0.33
EXOSC10-201ENST00000304457 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.33
EXOSC10-201ENST00000304457 EIF4G2P78344 907 aaKnown RBP eCLIP12.99□□□□□ -0.33
EXOSC10-201ENST00000304457 NBR1Q14596 966 aa12.99□□□□□ -0.33
EXOSC10-201ENST00000304457 NGLY1Q96IV0 654 aa12.99□□□□□ -0.33
EXOSC10-201ENST00000304457 POLR3GLQ9BT43 218 aa12.98□□□□□ -0.33
EXOSC10-201ENST00000304457 MRS2Q9HD23 443 aa12.98□□□□□ -0.33
EXOSC10-201ENST00000304457 PTPN23Q9H3S7 1636 aa12.98□□□□□ -0.33
EXOSC10-201ENST00000304457 PAK3O75914 559 aaPredicted RBP12.97□□□□□ -0.33
EXOSC10-201ENST00000304457 RTL5Q5HYW3 569 aaPredicted RBP12.97□□□□□ -0.33
EXOSC10-201ENST00000304457 CCDC141Q6ZP82 1450 aa12.97□□□□□ -0.33
EXOSC10-201ENST00000304457 TXNDC2Q86VQ3 553 aa12.97□□□□□ -0.33
EXOSC10-201ENST00000304457 PROSER2Q86WR7 435 aaPredicted RBP12.96□□□□□ -0.33
EXOSC10-201ENST00000304457 RBM33Q96EV2 1170 aaKnown RBP12.96□□□□□ -0.33
EXOSC10-201ENST00000304457 TMEM2Q9UHN6 1383 aa12.96□□□□□ -0.33
EXOSC10-201ENST00000304457 MPHOSPH9Q99550 1183 aa12.96□□□□□ -0.34
EXOSC10-201ENST00000304457 CFDP1Q9UEE9 299 aaPredicted RBP12.96□□□□□ -0.34
EXOSC10-201ENST00000304457 MYOM3Q5VTT5 1437 aa12.95□□□□□ -0.34
EXOSC10-201ENST00000304457 KIF3BO15066 747 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms