RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 GSE1Q14687 1217 aa10.51□□□□□ -0.73
NKRF-201ENST00000304449 KIAA1210Q9ULL0 1709 aa10.51□□□□□ -0.73
NKRF-201ENST00000304449 RCAN3Q9UKA8 241 aa10.5□□□□□ -0.73
NKRF-201ENST00000304449 FRAT1Q92837 279 aaPredicted RBP10.5□□□□□ -0.73
NKRF-201ENST00000304449 UHRF1BP1LA0JNW5 1464 aa10.5□□□□□ -0.73
NKRF-201ENST00000304449 CLTCL1P53675 1640 aa10.5□□□□□ -0.73
NKRF-201ENST00000304449 SCAPERQ9BY12 1400 aa10.5□□□□□ -0.73
NKRF-201ENST00000304449 ARAP3Q8WWN8 1544 aa10.49□□□□□ -0.73
NKRF-201ENST00000304449 PPM1GO15355 546 aaPredicted RBP10.49□□□□□ -0.73
NKRF-201ENST00000304449 CDCA7LQ96GN5 454 aa10.49□□□□□ -0.73
NKRF-201ENST00000304449 ZNF521Q96K83 1311 aa10.49□□□□□ -0.73
NKRF-201ENST00000304449 ZFYVE16Q7Z3T8 1539 aa10.49□□□□□ -0.73
NKRF-201ENST00000304449 TRAPPC8Q9Y2L5 1435 aa10.47□□□□□ -0.73
NKRF-201ENST00000304449 PANK3Q9H999 370 aa10.47□□□□□ -0.73
NKRF-201ENST00000304449 IFT172Q9UG01 1749 aa10.47□□□□□ -0.73
NKRF-201ENST00000304449 RTEL1-TNFRSF6BF6WH68 1400 aa10.47□□□□□ -0.73
NKRF-201ENST00000304449 NFKBIBQ15653 356 aa10.47□□□□□ -0.73
NKRF-201ENST00000304449 TET3O43151 1660 aa10.47□□□□□ -0.73
NKRF-201ENST00000304449 MROH1Q8NDA8 1641 aa10.47□□□□□ -0.73
NKRF-201ENST00000304449 USP35Q9P2H5 1018 aa10.46□□□□□ -0.73
NKRF-201ENST00000304449 INO80Q9ULG1 1556 aaPredicted RBP10.46□□□□□ -0.73
NKRF-201ENST00000304449 TCERG1O14776 1098 aaKnown RBP10.46□□□□□ -0.74
NKRF-201ENST00000304449 PKNOX2Q96KN3 472 aa10.46□□□□□ -0.74
NKRF-201ENST00000304449 RGL3Q3MIN7 710 aa10.45□□□□□ -0.74
NKRF-201ENST00000304449 AMER1Q5JTC6 1135 aaPredicted RBP10.45□□□□□ -0.74
NKRF-201ENST00000304449 BACH2Q9BYV9 841 aa10.45□□□□□ -0.74
NKRF-201ENST00000304449 MS4A1P11836 297 aa10.45□□□□□ -0.74
NKRF-201ENST00000304449 NPC1L1Q9UHC9 1359 aa10.45□□□□□ -0.74
NKRF-201ENST00000304449 PLEKHH1Q9ULM0 1364 aa10.45□□□□□ -0.74
NKRF-201ENST00000304449 KDM2BQ8NHM5 1336 aa10.44□□□□□ -0.74
NKRF-201ENST00000304449 ABCA9Q8IUA7 1624 aa10.44□□□□□ -0.74
NKRF-201ENST00000304449 MYO3AQ8NEV4 1616 aa10.44□□□□□ -0.74
NKRF-201ENST00000304449 SCAF11Q99590 1463 aaKnown RBP10.44□□□□□ -0.74
NKRF-201ENST00000304449 PIK3C2GO75747 1445 aa10.44□□□□□ -0.74
NKRF-201ENST00000304449 PLIN1O60240 522 aa10.43□□□□□ -0.74
NKRF-201ENST00000304449 TMF1P82094 1093 aa10.43□□□□□ -0.74
NKRF-201ENST00000304449 TRMT2AQ8IZ69 625 aaKnown RBP10.43□□□□□ -0.74
NKRF-201ENST00000304449 ASXL1Q8IXJ9 1541 aa10.43□□□□□ -0.74
NKRF-201ENST00000304449 CC2D1BQ5T0F9 858 aaKnown RBP10.43□□□□□ -0.74
NKRF-201ENST00000304449 NRXN1Q9ULB1 1477 aa10.42□□□□□ -0.74
NKRF-201ENST00000304449 DUSP27Q5VZP5 1158 aa10.42□□□□□ -0.74
NKRF-201ENST00000304449 VSIG10Q8N0Z9 540 aa10.42□□□□□ -0.74
NKRF-201ENST00000304449 ADAMTS8Q9UP79 889 aa10.42□□□□□ -0.74
NKRF-201ENST00000304449 MAP3K4Q9Y6R4 1608 aa10.42□□□□□ -0.74
NKRF-201ENST00000304449 ABCA6Q8N139 1617 aa10.41□□□□□ -0.74
NKRF-201ENST00000304449 KDM5AP29375 1690 aaKnown RBP10.41□□□□□ -0.74
NKRF-201ENST00000304449 FRAT2O75474 233 aaPredicted RBP10.41□□□□□ -0.74
NKRF-201ENST00000304449 PPP2R1AP30153 589 aa10.41□□□□□ -0.74
NKRF-201ENST00000304449 MYOM2P54296 1465 aa10.41□□□□□ -0.74
NKRF-201ENST00000304449 STAC3Q96MF2 364 aa10.4□□□□□ -0.74
NKRF-201ENST00000304449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.4□□□□□ -0.74
NKRF-201ENST00000304449 C20orf194Q5TEA3 1177 aa10.4□□□□□ -0.74
NKRF-201ENST00000304449 MROH2AA6NES4 1674 aa10.4□□□□□ -0.75
NKRF-201ENST00000304449 CRBNQ96SW2 442 aa10.39□□□□□ -0.75
NKRF-201ENST00000304449 ZC3H13Q5T200 1668 aaKnown RBP10.39□□□□□ -0.75
NKRF-201ENST00000304449 ERVK-7P63135 1459 aa10.39□□□□□ -0.75
NKRF-201ENST00000304449 PLPPR3Q6T4P5 718 aa10.39□□□□□ -0.75
NKRF-201ENST00000304449 SHPRHQ149N8 1683 aa10.38□□□□□ -0.75
NKRF-201ENST00000304449 ATP7AQ04656 1500 aa10.38□□□□□ -0.75
NKRF-201ENST00000304449 RSPH6AQ9H0K4 717 aa10.38□□□□□ -0.75
NKRF-201ENST00000304449 EFCAB2Q5VUJ9 269 aa10.37□□□□□ -0.75
NKRF-201ENST00000304449 DDRGK1Q96HY6 314 aa10.37□□□□□ -0.75
NKRF-201ENST00000304449 LMTK2Q8IWU2 1503 aa10.37□□□□□ -0.75
NKRF-201ENST00000304449 VIRMAQ69YN4 1812 aaKnown RBP10.37□□□□□ -0.75
NKRF-201ENST00000304449 EFCAB6Q5THR3 1501 aa10.36□□□□□ -0.75
NKRF-201ENST00000304449 RGS3P49796 1198 aa10.36□□□□□ -0.75
NKRF-201ENST00000304449 NAP1L5Q96NT1 182 aaPredicted RBP10.36□□□□□ -0.75
NKRF-201ENST00000304449 PPRC1Q5VV67 1664 aaKnown RBP10.36□□□□□ -0.75
NKRF-201ENST00000304449 UGGT1Q9NYU2 1555 aa10.36□□□□□ -0.75
NKRF-201ENST00000304449 SETBP1Q9Y6X0 1596 aa10.35□□□□□ -0.75
NKRF-201ENST00000304449 SLFN5Q08AF3 891 aa10.35□□□□□ -0.75
NKRF-201ENST00000304449 KIDINS220Q9ULH0 1771 aa10.35□□□□□ -0.75
NKRF-201ENST00000304449 KIF1BO60333 1816 aa10.35□□□□□ -0.75
NKRF-201ENST00000304449 SPINK5Q9NQ38 1064 aaPredicted RBP10.34□□□□□ -0.75
NKRF-201ENST00000304449 ADGRB3O60242 1522 aa10.34□□□□□ -0.75
NKRF-201ENST00000304449 USP32Q8NFA0 1604 aa10.34□□□□□ -0.75
NKRF-201ENST00000304449 GLIPR1L2Q4G1C9 344 aa10.34□□□□□ -0.75
NKRF-201ENST00000304449 SBNO2Q9Y2G9 1366 aa10.34□□□□□ -0.75
NKRF-201ENST00000304449 AFAP1Q8N556 730 aa10.33□□□□□ -0.76
NKRF-201ENST00000304449 CARD14Q9BXL6 1004 aa10.33□□□□□ -0.76
NKRF-201ENST00000304449 ZMYND15Q9H091 742 aa10.33□□□□□ -0.76
NKRF-201ENST00000304449 SPAG9O60271 1321 aaKnown RBP10.32□□□□□ -0.76
NKRF-201ENST00000304449 PPLO60437 1756 aa10.32□□□□□ -0.76
NKRF-201ENST00000304449 C8orf34Q49A92 452 aa10.32□□□□□ -0.76
NKRF-201ENST00000304449 ADGRB1O14514 1584 aa10.32□□□□□ -0.76
NKRF-201ENST00000304449 KNSTRNQ9Y448 316 aa10.32□□□□□ -0.76
NKRF-201ENST00000304449 NKTRP30414 1462 aaKnown RBP10.32□□□□□ -0.76
NKRF-201ENST00000304449 IQSEC2Q5JU85 1478 aa10.32□□□□□ -0.76
NKRF-201ENST00000304449 SLKQ9H2G2 1235 aaPredicted RBP10.32□□□□□ -0.76
NKRF-201ENST00000304449 EIF3AQ14152 1382 aaKnown RBP10.31□□□□□ -0.76
NKRF-201ENST00000304449 FANCAO15360 1455 aa10.31□□□□□ -0.76
NKRF-201ENST00000304449 GOLGA2Q08379 1002 aa10.31□□□□□ -0.76
NKRF-201ENST00000304449 CENPQQ7L2Z9 268 aaPredicted RBP10.31□□□□□ -0.76
NKRF-201ENST00000304449 POGKQ9P215 609 aa10.31□□□□□ -0.76
NKRF-201ENST00000304449 CDCA8Q53HL2 280 aa10.31□□□□□ -0.76
NKRF-201ENST00000304449 FAM43AQ8N2R8 423 aa10.31□□□□□ -0.76
NKRF-201ENST00000304449 DMRT2Q9Y5R5 561 aa10.3□□□□□ -0.76
NKRF-201ENST00000304449 FRMPD1Q5SYB0 1578 aa10.3□□□□□ -0.76
NKRF-201ENST00000304449 ADGRF5Q8IZF2 1346 aa10.29□□□□□ -0.76
NKRF-201ENST00000304449 RRAGDQ9NQL2 400 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms