RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 CCDC9Q9Y3X0 531 aaKnown RBP8.82□□□□□ -1
ZNF440-201ENST00000304060 PIK3R4Q99570 1358 aa8.81□□□□□ -1
ZNF440-201ENST00000304060 CAMSAP2Q08AD1 1489 aa8.81□□□□□ -1
ZNF440-201ENST00000304060 PLXNC1O60486 1568 aa8.81□□□□□ -1
ZNF440-201ENST00000304060 RBM33Q96EV2 1170 aaKnown RBP8.81□□□□□ -1
ZNF440-201ENST00000304060 FAM50AQ14320 339 aaKnown RBP8.8□□□□□ -1
ZNF440-201ENST00000304060 DUOX2Q9NRD8 1548 aa8.8□□□□□ -1
ZNF440-201ENST00000304060 BAG6P46379 1132 aa8.8□□□□□ -1
ZNF440-201ENST00000304060 LTKP29376 864 aa8.8□□□□□ -1
ZNF440-201ENST00000304060 CDC42BPAQ5VT25 1732 aa8.8□□□□□ -1
ZNF440-201ENST00000304060 VWDEQ8N2E2 1590 aa8.8□□□□□ -1
ZNF440-201ENST00000304060 EFCAB6Q5THR3 1501 aa8.8□□□□□ -1
ZNF440-201ENST00000304060 ARHGAP31Q2M1Z3 1444 aa8.8□□□□□ -1
ZNF440-201ENST00000304060 LRPPRCP42704 1394 aaKnown RBP8.8□□□□□ -1
ZNF440-201ENST00000304060 USP21Q9UK80 565 aa8.79□□□□□ -1
ZNF440-201ENST00000304060 ZC3H13Q5T200 1668 aaKnown RBP8.79□□□□□ -1
ZNF440-201ENST00000304060 CDK12Q9NYV4 1490 aaPredicted RBP8.79□□□□□ -1
ZNF440-201ENST00000304060 ADAMTS2O95450 1211 aa8.79□□□□□ -1
ZNF440-201ENST00000304060 IDI1Q13907 227 aa8.79□□□□□ -1
ZNF440-201ENST00000304060 ERBINQ96RT1 1412 aa8.78□□□□□ -1
ZNF440-201ENST00000304060 SIGLEC1Q9BZZ2 1709 aa8.78□□□□□ -1
ZNF440-201ENST00000304060 RGS17Q9UGC6 210 aaPredicted RBP8.77□□□□□ -1.01
ZNF440-201ENST00000304060 ADRA2BP18089 450 aa8.77□□□□□ -1.01
ZNF440-201ENST00000304060 PLEKHG1Q9ULL1 1385 aa8.76□□□□□ -1.01
ZNF440-201ENST00000304060 ARHGEF5Q12774 1597 aa8.76□□□□□ -1.01
ZNF440-201ENST00000304060 CHIC2Q9UKJ5 165 aa8.76□□□□□ -1.01
ZNF440-201ENST00000304060 MBD5Q9P267 1494 aa8.76□□□□□ -1.01
ZNF440-201ENST00000304060 AMOTL2Q9Y2J4 779 aa8.76□□□□□ -1.01
ZNF440-201ENST00000304060 RIMS2Q9UQ26 1411 aa8.75□□□□□ -1.01
ZNF440-201ENST00000304060 PRDM15P57071 1507 aaPredicted RBP8.75□□□□□ -1.01
ZNF440-201ENST00000304060 PPP1R1BQ9UD71 204 aaPredicted RBP8.75□□□□□ -1.01
ZNF440-201ENST00000304060 NEURL4Q96JN8 1562 aa8.75□□□□□ -1.01
ZNF440-201ENST00000304060 SLIT1O75093 1534 aa8.75□□□□□ -1.01
ZNF440-201ENST00000304060 PSME1Q06323 249 aa8.75□□□□□ -1.01
ZNF440-201ENST00000304060 ARHGAP23Q9P227 1491 aa8.74□□□□□ -1.01
ZNF440-201ENST00000304060 NPHP3Q7Z494 1330 aa8.74□□□□□ -1.01
ZNF440-201ENST00000304060 EIF2AK4Q9P2K8 1649 aaKnown RBP8.73□□□□□ -1.01
ZNF440-201ENST00000304060 NBPF8Q3BBV2 869 aa8.73□□□□□ -1.01
ZNF440-201ENST00000304060 NBPF14Q5TI25 921 aa8.73□□□□□ -1.01
ZNF440-201ENST00000304060 VGFO15240 615 aaPredicted RBP8.73□□□□□ -1.01
ZNF440-201ENST00000304060 DCCP43146 1447 aa8.72□□□□□ -1.01
ZNF440-201ENST00000304060 TIAM1Q13009 1591 aa8.71□□□□□ -1.01
ZNF440-201ENST00000304060 LMOD2Q6P5Q4 547 aa8.71□□□□□ -1.01
ZNF440-201ENST00000304060 PHLPP1O60346 1717 aa8.71□□□□□ -1.02
ZNF440-201ENST00000304060 BRINP3Q76B58 766 aa8.7□□□□□ -1.02
ZNF440-201ENST00000304060 PTCH1Q13635 1447 aa8.7□□□□□ -1.02
ZNF440-201ENST00000304060 ACIN1Q9UKV3 1341 aaKnown RBP8.7□□□□□ -1.02
ZNF440-201ENST00000304060 C11orf95C9JLR9 678 aaPredicted RBP8.69□□□□□ -1.02
ZNF440-201ENST00000304060 ROBO1Q9Y6N7 1651 aa8.68□□□□□ -1.02
ZNF440-201ENST00000304060 MAST1Q9Y2H9 1570 aa8.68□□□□□ -1.02
ZNF440-201ENST00000304060 TRPM2O94759 1503 aa8.68□□□□□ -1.02
ZNF440-201ENST00000304060 VPS8Q8N3P4 1428 aa8.68□□□□□ -1.02
ZNF440-201ENST00000304060 ESCO1Q5FWF5 840 aa8.67□□□□□ -1.02
ZNF440-201ENST00000304060 ADGRB3O60242 1522 aa8.67□□□□□ -1.02
ZNF440-201ENST00000304060 ANKRD50Q9ULJ7 1429 aa8.66□□□□□ -1.02
ZNF440-201ENST00000304060 SETD5Q9C0A6 1442 aa8.66□□□□□ -1.02
ZNF440-201ENST00000304060 DIP2AQ14689 1571 aa8.66□□□□□ -1.02
ZNF440-201ENST00000304060 BLMP54132 1417 aaPredicted RBP8.65□□□□□ -1.03
ZNF440-201ENST00000304060 GJD4Q96KN9 370 aaPredicted RBP8.65□□□□□ -1.03
ZNF440-201ENST00000304060 NUP155O75694 1391 aa8.65□□□□□ -1.03
ZNF440-201ENST00000304060 RPGRIP1LQ68CZ1 1315 aa8.64□□□□□ -1.03
ZNF440-201ENST00000304060 YY1P25490 414 aa8.64□□□□□ -1.03
ZNF440-201ENST00000304060 KRT27Q7Z3Y8 459 aa8.64□□□□□ -1.03
ZNF440-201ENST00000304060 UBR1Q8IWV7 1749 aa8.63□□□□□ -1.03
ZNF440-201ENST00000304060 UNC5CLQ8IV45 518 aa8.63□□□□□ -1.03
ZNF440-201ENST00000304060 CFAP65Q6ZU64 1925 aaKnown RBP8.63□□□□□ -1.03
ZNF440-201ENST00000304060 HMGB2P26583 209 aaKnown RBP8.63□□□□□ -1.03
ZNF440-201ENST00000304060 PNPLA6Q8IY17 1366 aa8.63□□□□□ -1.03
ZNF440-201ENST00000304060 ITGAEP38570 1179 aa8.63□□□□□ -1.03
ZNF440-201ENST00000304060 DAPK1P53355 1430 aa8.62□□□□□ -1.03
ZNF440-201ENST00000304060 AHDC1Q5TGY3 1603 aaPredicted RBP8.62□□□□□ -1.03
ZNF440-201ENST00000304060 MROH1Q8NDA8 1641 aa8.62□□□□□ -1.03
ZNF440-201ENST00000304060 MAP3K1Q13233 1512 aa8.62□□□□□ -1.03
ZNF440-201ENST00000304060 EIF3AQ14152 1382 aaKnown RBP8.62□□□□□ -1.03
ZNF440-201ENST00000304060 NOS1P29475 1434 aa8.62□□□□□ -1.03
ZNF440-201ENST00000304060 PDE3BQ13370 1112 aa8.62□□□□□ -1.03
ZNF440-201ENST00000304060 ADGRL3Q9HAR2 1447 aa8.61□□□□□ -1.03
ZNF440-201ENST00000304060 LMTK2Q8IWU2 1503 aa8.61□□□□□ -1.03
ZNF440-201ENST00000304060 AMER1Q5JTC6 1135 aaPredicted RBP8.61□□□□□ -1.03
ZNF440-201ENST00000304060 PIK3C2BO00750 1634 aa8.61□□□□□ -1.03
ZNF440-201ENST00000304060 KDM5AP29375 1690 aaKnown RBP8.61□□□□□ -1.03
ZNF440-201ENST00000304060 FNBP4Q8N3X1 1017 aaPredicted RBP8.61□□□□□ -1.03
ZNF440-201ENST00000304060 POGKQ9P215 609 aa8.61□□□□□ -1.03
ZNF440-201ENST00000304060 GPRASP1Q5JY77 1395 aa8.61□□□□□ -1.03
ZNF440-201ENST00000304060 EVA1CP58658 441 aa8.6□□□□□ -1.03
ZNF440-201ENST00000304060 NWD1Q149M9 1564 aa8.6□□□□□ -1.03
ZNF440-201ENST00000304060 SEPT12Q8IYM1 358 aa8.6□□□□□ -1.03
ZNF440-201ENST00000304060 ABCC5O15440 1437 aa8.6□□□□□ -1.03
ZNF440-201ENST00000304060 PLEKHG5O94827 1062 aa8.59□□□□□ -1.03
ZNF440-201ENST00000304060 HFM1A2PYH4 1435 aa8.59□□□□□ -1.03
ZNF440-201ENST00000304060 RGS12O14924 1447 aa8.59□□□□□ -1.03
ZNF440-201ENST00000304060 ARHGEF10O15013 1369 aa8.59□□□□□ -1.03
ZNF440-201ENST00000304060 SPON1Q9HCB6 807 aa8.58□□□□□ -1.04
ZNF440-201ENST00000304060 CEP152O94986 1710 aa8.58□□□□□ -1.04
ZNF440-201ENST00000304060 SLC4A1APQ9BWU0 796 aaKnown RBP8.58□□□□□ -1.04
ZNF440-201ENST00000304060 FAM196AQ6ZSG2 479 aa8.57□□□□□ -1.04
ZNF440-201ENST00000304060 KRT28Q7Z3Y7 464 aa8.57□□□□□ -1.04
ZNF440-201ENST00000304060 FOXO3O43524 673 aa8.57□□□□□ -1.04
ZNF440-201ENST00000304060 NCBP3Q53F19 620 aaKnown RBP8.57□□□□□ -1.04
ZNF440-201ENST00000304060 CCDC144AA2RUR9 1427 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms