RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 TRDNQ13061 729 aa17.32■□□□□ 0.36
HIPK3-201ENST00000303296 PPP1R1BQ9UD71 204 aaPredicted RBP17.32■□□□□ 0.36
HIPK3-201ENST00000303296 CCDC27Q2M243 656 aa17.32■□□□□ 0.36
HIPK3-201ENST00000303296 DIAPH3Q9NSV4 1193 aa17.32■□□□□ 0.36
HIPK3-201ENST00000303296 MYO6Q9UM54 1294 aa17.31■□□□□ 0.36
HIPK3-201ENST00000303296 SASS6Q6UVJ0 657 aa17.3■□□□□ 0.36
HIPK3-201ENST00000303296 ELL2O00472 640 aaPredicted RBP17.3■□□□□ 0.36
HIPK3-201ENST00000303296 C1orf141Q5JVX7 400 aa17.3■□□□□ 0.36
HIPK3-201ENST00000303296 RBM33Q96EV2 1170 aaKnown RBP17.3■□□□□ 0.36
HIPK3-201ENST00000303296 KTN1Q86UP2 1357 aaKnown RBP17.3■□□□□ 0.36
HIPK3-201ENST00000303296 SYCP1Q15431 976 aa17.29■□□□□ 0.36
HIPK3-201ENST00000303296 EIF2S2P20042 333 aaKnown RBP17.29■□□□□ 0.36
HIPK3-201ENST00000303296 STK11IPQ8N1F8 1099 aa17.29■□□□□ 0.36
HIPK3-201ENST00000303296 HMGN5P82970 282 aaKnown RBP17.29■□□□□ 0.36
HIPK3-201ENST00000303296 ARGLU1Q9NWB6 273 aaPredicted RBP17.29■□□□□ 0.36
HIPK3-201ENST00000303296 LRRFIP1Q32MZ4 808 aaKnown RBP17.28■□□□□ 0.36
HIPK3-201ENST00000303296 BRPF1P55201 1214 aaPredicted RBP17.27■□□□□ 0.36
HIPK3-201ENST00000303296 AXDND1Q5T1B0 1012 aaPredicted RBP17.27■□□□□ 0.36
HIPK3-201ENST00000303296 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.36
HIPK3-201ENST00000303296 C9orf78Q9NZ63 289 aaPredicted RBP17.27■□□□□ 0.35
HIPK3-201ENST00000303296 NEXNQ0ZGT2 675 aa17.26■□□□□ 0.35
HIPK3-201ENST00000303296 VPS37CA5D8V6 355 aaPredicted RBP17.26■□□□□ 0.35
HIPK3-201ENST00000303296 LMOD3Q0VAK6 560 aa17.26■□□□□ 0.35
HIPK3-201ENST00000303296 CLASRPQ8N2M8 674 aaKnown RBP17.26■□□□□ 0.35
HIPK3-201ENST00000303296 CHMP4CQ96CF2 233 aa17.25■□□□□ 0.35
HIPK3-201ENST00000303296 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
HIPK3-201ENST00000303296 TAX1BP1Q86VP1 789 aa17.24■□□□□ 0.35
HIPK3-201ENST00000303296 RRP7AQ9Y3A4 280 aaKnown RBP17.24■□□□□ 0.35
HIPK3-201ENST00000303296 PLIN1O60240 522 aa17.24■□□□□ 0.35
HIPK3-201ENST00000303296 SAFBQ15424 915 aaKnown RBP eCLIP17.24■□□□□ 0.35
HIPK3-201ENST00000303296 CENPHQ9H3R5 247 aa17.23■□□□□ 0.35
HIPK3-201ENST00000303296 OLFM4Q6UX06 510 aa17.23■□□□□ 0.35
HIPK3-201ENST00000303296 NEBLO76041 1014 aa17.23■□□□□ 0.35
HIPK3-201ENST00000303296 BCL2L13Q9BXK5 485 aa17.23■□□□□ 0.35
HIPK3-201ENST00000303296 IPO9Q96P70 1041 aaKnown RBP17.22■□□□□ 0.35
HIPK3-201ENST00000303296 NF2P35240 595 aa17.22■□□□□ 0.35
HIPK3-201ENST00000303296 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
HIPK3-201ENST00000303296 TTC5Q8N0Z6 440 aa17.22■□□□□ 0.35
HIPK3-201ENST00000303296 CWC15Q9P013 229 aaKnown RBP17.22■□□□□ 0.35
HIPK3-201ENST00000303296 BCCIPQ9P287 314 aaKnown RBP eCLIP17.22■□□□□ 0.35
HIPK3-201ENST00000303296 ANKRD18AQ8IVF6 992 aa17.21■□□□□ 0.35
HIPK3-201ENST00000303296 PDCL3Q9H2J4 239 aa17.21■□□□□ 0.35
HIPK3-201ENST00000303296 DYDC1Q8WWB3 177 aa17.21■□□□□ 0.35
HIPK3-201ENST00000303296 IFIT2P09913 472 aaKnown RBP17.21■□□□□ 0.34
HIPK3-201ENST00000303296 CT47B1P0C2W7 299 aaPredicted RBP17.21■□□□□ 0.34
HIPK3-201ENST00000303296 ZKSCAN1P17029 563 aaPredicted RBP17.2■□□□□ 0.34
HIPK3-201ENST00000303296 CENPJQ9HC77 1338 aaPredicted RBP17.2■□□□□ 0.34
HIPK3-201ENST00000303296 CDK5RAP3Q96JB5 506 aa17.2■□□□□ 0.34
HIPK3-201ENST00000303296 ATP2B2Q01814 1243 aa17.19■□□□□ 0.34
HIPK3-201ENST00000303296 RUFY2Q8WXA3 655 aa17.19■□□□□ 0.34
HIPK3-201ENST00000303296 ROCK2O75116 1388 aaKnown RBP17.19■□□□□ 0.34
HIPK3-201ENST00000303296 CLIP1P30622 1438 aa17.19■□□□□ 0.34
HIPK3-201ENST00000303296 BRMS1Q9HCU9 246 aa17.19■□□□□ 0.34
HIPK3-201ENST00000303296 FOXD1Q16676 465 aa17.18■□□□□ 0.34
HIPK3-201ENST00000303296 EID1Q9Y6B2 187 aa17.18■□□□□ 0.34
HIPK3-201ENST00000303296 KRT18P05783 430 aaKnown RBP17.18■□□□□ 0.34
HIPK3-201ENST00000303296 ERLIN2O94905 339 aa17.18■□□□□ 0.34
HIPK3-201ENST00000303296 MATR3P43243 847 aaKnown RBP eCLIP17.17■□□□□ 0.34
HIPK3-201ENST00000303296 ZHX3Q9H4I2 956 aa17.17■□□□□ 0.34
HIPK3-201ENST00000303296 SEPT11Q9NVA2 429 aaKnown RBP17.17■□□□□ 0.34
HIPK3-201ENST00000303296 EZRP15311 586 aaKnown RBP17.17■□□□□ 0.34
HIPK3-201ENST00000303296 ATP2B1P20020 1258 aa17.17■□□□□ 0.34
HIPK3-201ENST00000303296 SKOR2Q2VWA4 1001 aaPredicted RBP17.17■□□□□ 0.34
HIPK3-201ENST00000303296 PSMD1Q99460 953 aa17.16■□□□□ 0.34
HIPK3-201ENST00000303296 HSP90AB4PQ58FF6 505 aa17.16■□□□□ 0.34
HIPK3-201ENST00000303296 LEKR1Q6ZMV7 388 aa17.16■□□□□ 0.34
HIPK3-201ENST00000303296 MAGEC2Q9UBF1 373 aaPredicted RBP17.16■□□□□ 0.34
HIPK3-201ENST00000303296 GOLGA6L10A6NI86 522 aa17.16■□□□□ 0.34
HIPK3-201ENST00000303296 TEFQ10587 303 aa17.16■□□□□ 0.34
HIPK3-201ENST00000303296 ERCC4Q92889 916 aaPredicted RBP17.16■□□□□ 0.34
HIPK3-201ENST00000303296 WASHC4Q2M389 1173 aa17.15■□□□□ 0.34
HIPK3-201ENST00000303296 CCDC73Q6ZRK6 1079 aa17.15■□□□□ 0.34
HIPK3-201ENST00000303296 GBP2P32456 591 aaPredicted RBP17.15■□□□□ 0.34
HIPK3-201ENST00000303296 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
HIPK3-201ENST00000303296 SMC3Q9UQE7 1217 aa17.15■□□□□ 0.34
HIPK3-201ENST00000303296 CGNL1Q0VF96 1302 aa17.15■□□□□ 0.34
HIPK3-201ENST00000303296 SMC2O95347 1197 aa17.14■□□□□ 0.34
HIPK3-201ENST00000303296 FAM177BA6PVY3 158 aa17.14■□□□□ 0.33
HIPK3-201ENST00000303296 FAM193AP78312 1265 aa17.14■□□□□ 0.33
HIPK3-201ENST00000303296 PUS7Q96PZ0 661 aaKnown RBP17.14■□□□□ 0.33
HIPK3-201ENST00000303296 RALYLQ86SE5 291 aaKnown RBP17.13■□□□□ 0.33
HIPK3-201ENST00000303296 TERF2IPQ9NYB0 399 aa17.13■□□□□ 0.33
HIPK3-201ENST00000303296 SCRIBQ14160 1630 aa17.13■□□□□ 0.33
HIPK3-201ENST00000303296 GOLGA6L10A0A0M3HER8 536 aa17.13■□□□□ 0.33
HIPK3-201ENST00000303296 NEUROD6Q96NK8 337 aa17.13■□□□□ 0.33
HIPK3-201ENST00000303296 SPDYE4A6NLX3 237 aa17.13■□□□□ 0.33
HIPK3-201ENST00000303296 FMNL2Q96PY5 1086 aa17.13■□□□□ 0.33
HIPK3-201ENST00000303296 KIAA0754O94854 1291 aa17.12■□□□□ 0.33
HIPK3-201ENST00000303296 RNF20Q5VTR2 975 aa17.12■□□□□ 0.33
HIPK3-201ENST00000303296 CHMP4BP1P59074 171 aa17.12■□□□□ 0.33
HIPK3-201ENST00000303296 HSPA5P11021 654 aaKnown RBP17.11■□□□□ 0.33
HIPK3-201ENST00000303296 XBP1P17861 261 aa17.1■□□□□ 0.33
HIPK3-201ENST00000303296 SDF4Q9BRK5 362 aa17.1■□□□□ 0.33
HIPK3-201ENST00000303296 SSR1P43307 286 aaKnown RBP17.1■□□□□ 0.33
HIPK3-201ENST00000303296 NAT10Q9H0A0 1025 aaKnown RBP17.1■□□□□ 0.33
HIPK3-201ENST00000303296 GOLGA6L7A0A1B0GV03 622 aa17.1■□□□□ 0.33
HIPK3-201ENST00000303296 G3BP1Q13283 466 aaKnown RBP eCLIP17.1■□□□□ 0.33
HIPK3-201ENST00000303296 SMARCE1Q969G3 411 aa17.09■□□□□ 0.33
HIPK3-201ENST00000303296 TTC16Q8NEE8 873 aa17.09■□□□□ 0.33
HIPK3-201ENST00000303296 CHMP5Q9NZZ3 219 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms