RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 CC2D1BQ5T0F9 858 aaKnown RBP32.08■■■□□ 2.73
FOXA3-201ENST00000302177 SCAF11Q99590 1463 aaKnown RBP32.08■■■□□ 2.73
FOXA3-201ENST00000302177 ABCA9Q8IUA7 1624 aa32.08■■■□□ 2.73
FOXA3-201ENST00000302177 INO80Q9ULG1 1556 aaPredicted RBP32.07■■■□□ 2.72
FOXA3-201ENST00000302177 ATP7AQ04656 1500 aa32.06■■■□□ 2.72
FOXA3-201ENST00000302177 PPRC1Q5VV67 1664 aaKnown RBP32.05■■■□□ 2.72
FOXA3-201ENST00000302177 CLTCL1P53675 1640 aa32.04■■■□□ 2.72
FOXA3-201ENST00000302177 KIAA1210Q9ULL0 1709 aa32.04■■■□□ 2.72
FOXA3-201ENST00000302177 ERICH6Q7L0X2 663 aa32.03■■■□□ 2.72
FOXA3-201ENST00000302177 SLC24A1O60721 1099 aa32.03■■■□□ 2.72
FOXA3-201ENST00000302177 FANCAO15360 1455 aa32.03■■■□□ 2.72
FOXA3-201ENST00000302177 SENP3-EIF4A1A0A087X0R7 540 aa32.02■■■□□ 2.72
FOXA3-201ENST00000302177 SYNMO15061 1565 aa32.01■■■□□ 2.72
FOXA3-201ENST00000302177 KNSTRNQ9Y448 316 aa31.99■■■□□ 2.71
FOXA3-201ENST00000302177 EIF3AQ14152 1382 aaKnown RBP31.98■■■□□ 2.71
FOXA3-201ENST00000302177 NPC1L1Q9UHC9 1359 aa31.98■■■□□ 2.71
FOXA3-201ENST00000302177 AMER1Q5JTC6 1135 aaPredicted RBP31.93■■■□□ 2.7
FOXA3-201ENST00000302177 ADGRL1O94910 1474 aa31.92■■■□□ 2.7
FOXA3-201ENST00000302177 MYOM2P54296 1465 aa31.92■■■□□ 2.7
FOXA3-201ENST00000302177 SALL2Q9Y467 1007 aaPredicted RBP31.92■■■□□ 2.7
FOXA3-201ENST00000302177 PPP2R1AP30153 589 aa31.91■■■□□ 2.7
FOXA3-201ENST00000302177 EXOC6Q8TAG9 804 aa31.91■■■□□ 2.7
FOXA3-201ENST00000302177 CDCA7LQ96GN5 454 aa31.9■■■□□ 2.7
FOXA3-201ENST00000302177 ASXL1Q8IXJ9 1541 aa31.9■■■□□ 2.7
FOXA3-201ENST00000302177 KIF3BO15066 747 aa31.9■■■□□ 2.7
FOXA3-201ENST00000302177 MROH1Q8NDA8 1641 aa31.89■■■□□ 2.69
FOXA3-201ENST00000302177 PIK3C2GO75747 1445 aa31.88■■■□□ 2.69
FOXA3-201ENST00000302177 ADAMTS8Q9UP79 889 aa31.86■■■□□ 2.69
FOXA3-201ENST00000302177 TCERG1O14776 1098 aaKnown RBP31.85■■■□□ 2.69
FOXA3-201ENST00000302177 LMTK2Q8IWU2 1503 aa31.83■■■□□ 2.69
FOXA3-201ENST00000302177 MYT1LQ9UL68 1186 aa31.83■■■□□ 2.69
FOXA3-201ENST00000302177 MYOM1P52179 1685 aa31.82■■■□□ 2.68
FOXA3-201ENST00000302177 WDR43Q15061 677 aaKnown RBP eCLIP31.82■■■□□ 2.68
FOXA3-201ENST00000302177 EFCAB6Q5THR3 1501 aa31.82■■■□□ 2.68
FOXA3-201ENST00000302177 KDM5AP29375 1690 aaKnown RBP31.81■■■□□ 2.68
FOXA3-201ENST00000302177 ANP32AP39687 249 aaKnown RBP31.79■■■□□ 2.68
FOXA3-201ENST00000302177 NOP58Q9Y2X3 529 aaKnown RBP31.79■■■□□ 2.68
FOXA3-201ENST00000302177 KIF1BO60333 1816 aa31.79■■■□□ 2.68
FOXA3-201ENST00000302177 NRXN1Q9ULB1 1477 aa31.77■■■□□ 2.68
FOXA3-201ENST00000302177 MS4A1P11836 297 aa31.77■■■□□ 2.68
FOXA3-201ENST00000302177 IFT172Q9UG01 1749 aa31.76■■■□□ 2.67
FOXA3-201ENST00000302177 ZNF521Q96K83 1311 aa31.76■■■□□ 2.67
FOXA3-201ENST00000302177 RAPGEF3O95398 923 aa31.76■■■□□ 2.67
FOXA3-201ENST00000302177 KIDINS220Q9ULH0 1771 aa31.75■■■□□ 2.67
FOXA3-201ENST00000302177 ABCA6Q8N139 1617 aa31.75■■■□□ 2.67
FOXA3-201ENST00000302177 ZNF518AQ6AHZ1 1483 aa31.75■■■□□ 2.67
FOXA3-201ENST00000302177 SBNO2Q9Y2G9 1366 aa31.74■■■□□ 2.67
FOXA3-201ENST00000302177 NEO1Q92859 1461 aa31.74■■■□□ 2.67
FOXA3-201ENST00000302177 IPO9Q96P70 1041 aaKnown RBP31.74■■■□□ 2.67
FOXA3-201ENST00000302177 ERVK-7P63135 1459 aa31.72■■■□□ 2.67
FOXA3-201ENST00000302177 CFAP70Q5T0N1 1121 aa31.72■■■□□ 2.67
FOXA3-201ENST00000302177 MYO3AQ8NEV4 1616 aa31.71■■■□□ 2.67
FOXA3-201ENST00000302177 ADGRF5Q8IZF2 1346 aa31.7■■■□□ 2.67
FOXA3-201ENST00000302177 PLEKHH1Q9ULM0 1364 aa31.69■■■□□ 2.66
FOXA3-201ENST00000302177 SETBP1Q9Y6X0 1596 aa31.69■■■□□ 2.66
FOXA3-201ENST00000302177 GOLGA2Q08379 1002 aa31.68■■■□□ 2.66
FOXA3-201ENST00000302177 DUSP27Q5VZP5 1158 aa31.68■■■□□ 2.66
FOXA3-201ENST00000302177 UGGT1Q9NYU2 1555 aa31.68■■■□□ 2.66
FOXA3-201ENST00000302177 NGEFQ8N5V2 710 aa31.68■■■□□ 2.66
FOXA3-201ENST00000302177 CFAP74Q9C0B2 1584 aa31.66■■■□□ 2.66
FOXA3-201ENST00000302177 ADGRB3O60242 1522 aa31.65■■■□□ 2.66
FOXA3-201ENST00000302177 CRBNQ96SW2 442 aa31.64■■■□□ 2.66
FOXA3-201ENST00000302177 PLIN1O60240 522 aa31.63■■■□□ 2.65
FOXA3-201ENST00000302177 TRMT2AQ8IZ69 625 aaKnown RBP31.62■■■□□ 2.65
FOXA3-201ENST00000302177 MLH3Q9UHC1 1453 aa31.62■■■□□ 2.65
FOXA3-201ENST00000302177 MROH2AA6NES4 1674 aa31.62■■■□□ 2.65
FOXA3-201ENST00000302177 SLFN5Q08AF3 891 aa31.61■■■□□ 2.65
FOXA3-201ENST00000302177 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.6■■■□□ 2.65
FOXA3-201ENST00000302177 PDE4AP27815 886 aa31.59■■■□□ 2.65
FOXA3-201ENST00000302177 BACH2Q9BYV9 841 aa31.59■■■□□ 2.65
FOXA3-201ENST00000302177 ZBTB47Q9UFB7 747 aaPredicted RBP31.58■■■□□ 2.65
FOXA3-201ENST00000302177 RPGRIP1LQ68CZ1 1315 aa31.58■■■□□ 2.65
FOXA3-201ENST00000302177 POGZQ7Z3K3 1410 aa31.57■■■□□ 2.64
FOXA3-201ENST00000302177 CARD14Q9BXL6 1004 aa31.56■■■□□ 2.64
FOXA3-201ENST00000302177 PAK3O75914 559 aaPredicted RBP31.56■■■□□ 2.64
FOXA3-201ENST00000302177 NOS1P29475 1434 aa31.55■■■□□ 2.64
FOXA3-201ENST00000302177 CENPJQ9HC77 1338 aaPredicted RBP31.55■■■□□ 2.64
FOXA3-201ENST00000302177 C14orf93Q9H972 538 aaKnown RBP31.54■■■□□ 2.64
FOXA3-201ENST00000302177 POLR3AO14802 1390 aaPredicted RBP31.53■■■□□ 2.64
FOXA3-201ENST00000302177 NPATQ14207 1427 aa31.53■■■□□ 2.64
FOXA3-201ENST00000302177 FRMPD1Q5SYB0 1578 aa31.52■■■□□ 2.64
FOXA3-201ENST00000302177 PPLO60437 1756 aa31.51■■■□□ 2.63
FOXA3-201ENST00000302177 KDM2BQ8NHM5 1336 aa31.5■■■□□ 2.63
FOXA3-201ENST00000302177 HECW2Q9P2P5 1572 aa31.49■■■□□ 2.63
FOXA3-201ENST00000302177 C20orf194Q5TEA3 1177 aa31.48■■■□□ 2.63
FOXA3-201ENST00000302177 CENPQQ7L2Z9 268 aaPredicted RBP31.48■■■□□ 2.63
FOXA3-201ENST00000302177 E9PSI1 815 aa31.48■■■□□ 2.63
FOXA3-201ENST00000302177 PUS7Q96PZ0 661 aaKnown RBP31.48■■■□□ 2.63
FOXA3-201ENST00000302177 NKTRP30414 1462 aaKnown RBP31.47■■■□□ 2.63
FOXA3-201ENST00000302177 ADGRB1O14514 1584 aa31.47■■■□□ 2.63
FOXA3-201ENST00000302177 RICTORQ6R327 1708 aa31.46■■■□□ 2.63
FOXA3-201ENST00000302177 APAF1O14727 1248 aa31.46■■■□□ 2.63
FOXA3-201ENST00000302177 ZC3H13Q5T200 1668 aaKnown RBP31.44■■■□□ 2.62
FOXA3-201ENST00000302177 CCDC146Q8IYE0 955 aa31.43■■■□□ 2.62
FOXA3-201ENST00000302177 ABCC3O15438 1527 aa31.42■■■□□ 2.62
FOXA3-201ENST00000302177 CHGAP10645 457 aaKnown RBP31.41■■■□□ 2.62
FOXA3-201ENST00000302177 USP32Q8NFA0 1604 aa31.4■■■□□ 2.62
FOXA3-201ENST00000302177 QRICH2Q9H0J4 1663 aa31.39■■■□□ 2.62
FOXA3-201ENST00000302177 GGT6Q6P531 493 aa31.39■■■□□ 2.62
FOXA3-201ENST00000302177 YEATS2Q9ULM3 1422 aa31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms