RNA–Protein interactions for RNA: ENST00000301981.7

LRRC28-201, Transcript of leucine rich repeat containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC28, Length 5,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-201ENST00000301981 TULP1O00294 542 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-201ENST00000301981 MCTP1Q6DN14 999 aa9.64□□□□□ -0.87
LRRC28-201ENST00000301981 ANKRD50Q9ULJ7 1429 aa9.64□□□□□ -0.87
LRRC28-201ENST00000301981 CALD1Q05682 793 aaKnown RBP9.63□□□□□ -0.87
LRRC28-201ENST00000301981 DZIP1LQ8IYY4 767 aaKnown RBP9.63□□□□□ -0.87
LRRC28-201ENST00000301981 ERICH3Q5RHP9 1530 aa9.63□□□□□ -0.87
LRRC28-201ENST00000301981 IPO8O15397 1037 aaKnown RBP9.63□□□□□ -0.87
LRRC28-201ENST00000301981 FGD1P98174 961 aa9.63□□□□□ -0.87
LRRC28-201ENST00000301981 IGHDP01880 384 aa9.62□□□□□ -0.87
LRRC28-201ENST00000301981 KANK1Q14678 1352 aa9.62□□□□□ -0.87
LRRC28-201ENST00000301981 EXOSC9Q06265 439 aaKnown RBP9.62□□□□□ -0.87
LRRC28-201ENST00000301981 EFCAB2Q5VUJ9 269 aa9.62□□□□□ -0.87
LRRC28-201ENST00000301981 BRD4O60885 1362 aaPredicted RBP9.62□□□□□ -0.87
LRRC28-201ENST00000301981 FBLN1P23142 703 aa9.62□□□□□ -0.87
LRRC28-201ENST00000301981 TRAK2O60296 914 aa9.61□□□□□ -0.87
LRRC28-201ENST00000301981 FBXW7Q969H0 707 aa9.61□□□□□ -0.87
LRRC28-201ENST00000301981 THUMPD2Q9BTF0 503 aaKnown RBP9.61□□□□□ -0.87
LRRC28-201ENST00000301981 FOSBP53539 338 aa9.61□□□□□ -0.87
LRRC28-201ENST00000301981 WASHC2CQ9Y4E1 1318 aa9.61□□□□□ -0.87
LRRC28-201ENST00000301981 HDGFL2Q7Z4V5 671 aaPredicted RBP9.6□□□□□ -0.87
LRRC28-201ENST00000301981 ZNF330Q9Y3S2 320 aaPredicted RBP9.6□□□□□ -0.87
LRRC28-201ENST00000301981 RSPH6AQ9H0K4 717 aa9.6□□□□□ -0.87
LRRC28-201ENST00000301981 MEX3CQ5U5Q3 659 aaKnown RBP9.6□□□□□ -0.87
LRRC28-201ENST00000301981 NOB1Q9ULX3 412 aaKnown RBP9.6□□□□□ -0.87
LRRC28-201ENST00000301981 CARMIL2Q6F5E8 1435 aa9.6□□□□□ -0.87
LRRC28-201ENST00000301981 NUTM2GQ5VZR2 741 aa9.59□□□□□ -0.87
LRRC28-201ENST00000301981 CGNL1Q0VF96 1302 aa9.59□□□□□ -0.87
LRRC28-201ENST00000301981 FYCO1Q9BQS8 1478 aa9.59□□□□□ -0.87
LRRC28-201ENST00000301981 SEC24BO95487 1268 aa9.59□□□□□ -0.87
LRRC28-201ENST00000301981 RTF1Q92541 710 aaKnown RBP9.59□□□□□ -0.87
LRRC28-201ENST00000301981 GOLGA6L4A6NEF3 574 aa9.59□□□□□ -0.87
LRRC28-201ENST00000301981 OSCARQ8IYS5 282 aa9.59□□□□□ -0.87
LRRC28-201ENST00000301981 R3HCC1Q9Y3T6 440 aaKnown RBP9.58□□□□□ -0.88
LRRC28-201ENST00000301981 CAVIN1Q6NZI2 390 aaKnown RBP9.57□□□□□ -0.88
LRRC28-201ENST00000301981 NGEFQ8N5V2 710 aa9.57□□□□□ -0.88
LRRC28-201ENST00000301981 RUNDC1Q96C34 613 aa9.57□□□□□ -0.88
LRRC28-201ENST00000301981 MAP4K4O95819 1239 aaPredicted RBP9.57□□□□□ -0.88
LRRC28-201ENST00000301981 ANKRD30BQ9BXX2 1392 aa9.57□□□□□ -0.88
LRRC28-201ENST00000301981 CHMP5Q9NZZ3 219 aa9.57□□□□□ -0.88
LRRC28-201ENST00000301981 DAPK1P53355 1430 aa9.57□□□□□ -0.88
LRRC28-201ENST00000301981 EIF2S2P20042 333 aaKnown RBP9.56□□□□□ -0.88
LRRC28-201ENST00000301981 PANK2Q9BZ23 570 aa9.56□□□□□ -0.88
LRRC28-201ENST00000301981 KDM4AO75164 1064 aa9.56□□□□□ -0.88
LRRC28-201ENST00000301981 NCOA1Q15788 1441 aa9.56□□□□□ -0.88
LRRC28-201ENST00000301981 CCDC27Q2M243 656 aa9.55□□□□□ -0.88
LRRC28-201ENST00000301981 DDX11L8A8MPP1 907 aa9.55□□□□□ -0.88
LRRC28-201ENST00000301981 DISP3Q9P2K9 1392 aa9.55□□□□□ -0.88
LRRC28-201ENST00000301981 ZRSR1Q15695 479 aaKnown RBP9.55□□□□□ -0.88
LRRC28-201ENST00000301981 EIF3AQ14152 1382 aaKnown RBP9.55□□□□□ -0.88
LRRC28-201ENST00000301981 KIAA1107Q9UPP5 1409 aa9.55□□□□□ -0.88
LRRC28-201ENST00000301981 POLA1P09884 1462 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-201ENST00000301981 PRPF40AO75400 957 aaKnown RBP9.54□□□□□ -0.88
LRRC28-201ENST00000301981 LARP6Q9BRS8 491 aaKnown RBP9.54□□□□□ -0.88
LRRC28-201ENST00000301981 SPINK5Q9NQ38 1064 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-201ENST00000301981 SLFN5Q08AF3 891 aa9.54□□□□□ -0.88
LRRC28-201ENST00000301981 MIS18AQ9NYP9 233 aa9.54□□□□□ -0.88
LRRC28-201ENST00000301981 MCCP23508 829 aa9.54□□□□□ -0.88
LRRC28-201ENST00000301981 DCTN1Q14203 1278 aa9.53□□□□□ -0.88
LRRC28-201ENST00000301981 ANO2Q9NQ90 1003 aa9.53□□□□□ -0.88
LRRC28-201ENST00000301981 PTPRGP23470 1445 aa9.53□□□□□ -0.88
LRRC28-201ENST00000301981 DIAPH1O60610 1272 aaKnown RBP9.53□□□□□ -0.88
LRRC28-201ENST00000301981 DTNBO60941 627 aa9.53□□□□□ -0.88
LRRC28-201ENST00000301981 HSP90B1P14625 803 aaKnown RBP9.53□□□□□ -0.88
LRRC28-201ENST00000301981 KIAA1211Q6ZU35 1233 aa9.53□□□□□ -0.88
LRRC28-201ENST00000301981 WWC1Q8IX03 1113 aa9.53□□□□□ -0.88
LRRC28-201ENST00000301981 FAM43AQ8N2R8 423 aa9.53□□□□□ -0.88
LRRC28-201ENST00000301981 DUSP27Q5VZP5 1158 aa9.53□□□□□ -0.88
LRRC28-201ENST00000301981 ZNF592Q92610 1267 aa9.53□□□□□ -0.88
LRRC28-201ENST00000301981 DDX19BQ9UMR2 479 aa9.53□□□□□ -0.88
LRRC28-201ENST00000301981 SMARCA5O60264 1052 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-201ENST00000301981 TERF2IPQ9NYB0 399 aa9.52□□□□□ -0.88
LRRC28-201ENST00000301981 PTPN23Q9H3S7 1636 aa9.52□□□□□ -0.89
LRRC28-201ENST00000301981 TBC1D2Q9BYX2 928 aa9.52□□□□□ -0.89
LRRC28-201ENST00000301981 DDX54Q8TDD1 881 aaKnown RBP9.52□□□□□ -0.89
LRRC28-201ENST00000301981 PRKAR2BP31323 418 aa9.52□□□□□ -0.89
LRRC28-201ENST00000301981 NASPP49321 788 aaPredicted RBP9.52□□□□□ -0.89
LRRC28-201ENST00000301981 KIAA2012Q0VF49 1180 aa9.52□□□□□ -0.89
LRRC28-201ENST00000301981 ABCC5O15440 1437 aa9.52□□□□□ -0.89
LRRC28-201ENST00000301981 ERBINQ96RT1 1412 aa9.51□□□□□ -0.89
LRRC28-201ENST00000301981 TMEM57Q8N5G2 664 aa9.51□□□□□ -0.89
LRRC28-201ENST00000301981 DMRT2Q9Y5R5 561 aa9.51□□□□□ -0.89
LRRC28-201ENST00000301981 ST18O60284 1047 aa9.51□□□□□ -0.89
LRRC28-201ENST00000301981 PRDM10Q9NQV6 1147 aa9.5□□□□□ -0.89
LRRC28-201ENST00000301981 C9orf84Q5VXU9 1444 aa9.5□□□□□ -0.89
LRRC28-201ENST00000301981 TSHZ3Q63HK5 1081 aa9.5□□□□□ -0.89
LRRC28-201ENST00000301981 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.5□□□□□ -0.89
LRRC28-201ENST00000301981 NCAPD3P42695 1498 aa9.5□□□□□ -0.89
LRRC28-201ENST00000301981 MCM4P33991 863 aa9.5□□□□□ -0.89
LRRC28-201ENST00000301981 C8orf34Q49A92 452 aa9.5□□□□□ -0.89
LRRC28-201ENST00000301981 STK31Q9BXU1 1019 aa9.5□□□□□ -0.89
LRRC28-201ENST00000301981 ZMYND15Q9H091 742 aa9.5□□□□□ -0.89
LRRC28-201ENST00000301981 CHAF1AQ13111 956 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-201ENST00000301981 RRS1Q15050 365 aaKnown RBP9.49□□□□□ -0.89
LRRC28-201ENST00000301981 GRPEL1Q9HAV7 217 aa9.49□□□□□ -0.89
LRRC28-201ENST00000301981 TOPBP1Q92547 1522 aa9.49□□□□□ -0.89
LRRC28-201ENST00000301981 AMPHP49418 695 aa9.49□□□□□ -0.89
LRRC28-201ENST00000301981 MAPK8IP2Q13387 824 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-201ENST00000301981 CREBRFQ8IUR6 639 aa9.49□□□□□ -0.89
LRRC28-201ENST00000301981 RBM42Q9BTD8 480 aaKnown RBP9.49□□□□□ -0.89
LRRC28-201ENST00000301981 PCDHB15Q9Y5E8 787 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms