RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 WDR43Q15061 677 aaKnown RBP eCLIP20.78■□□□□ 0.92
CHAF1A-201ENST00000301280 CFAP70Q5T0N1 1121 aa20.77■□□□□ 0.92
CHAF1A-201ENST00000301280 ATP7AQ04656 1500 aa20.77■□□□□ 0.91
CHAF1A-201ENST00000301280 TRAK1Q9UPV9 953 aa20.76■□□□□ 0.91
CHAF1A-201ENST00000301280 TMEM132EQ6IEE7 984 aa20.75■□□□□ 0.91
CHAF1A-201ENST00000301280 SCAPERQ9BY12 1400 aa20.75■□□□□ 0.91
CHAF1A-201ENST00000301280 STK26Q9P289 416 aa20.75■□□□□ 0.91
CHAF1A-201ENST00000301280 MYBBP1AQ9BQG0 1328 aaKnown RBP20.73■□□□□ 0.91
CHAF1A-201ENST00000301280 WASHC2CQ9Y4E1 1318 aa20.73■□□□□ 0.91
CHAF1A-201ENST00000301280 MYO3AQ8NEV4 1616 aa20.73■□□□□ 0.91
CHAF1A-201ENST00000301280 KIDINS220Q9ULH0 1771 aa20.73■□□□□ 0.91
CHAF1A-201ENST00000301280 SYNMO15061 1565 aa20.73■□□□□ 0.91
CHAF1A-201ENST00000301280 LMTK2Q8IWU2 1503 aa20.72■□□□□ 0.91
CHAF1A-201ENST00000301280 RALBP1Q15311 655 aa20.72■□□□□ 0.91
CHAF1A-201ENST00000301280 TESK2Q96S53 571 aa20.72■□□□□ 0.91
CHAF1A-201ENST00000301280 RCAN3Q9UKA8 241 aa20.72■□□□□ 0.91
CHAF1A-201ENST00000301280 PER1O15534 1290 aaPredicted RBP20.71■□□□□ 0.91
CHAF1A-201ENST00000301280 NLRP13Q86W25 1043 aa20.71■□□□□ 0.91
CHAF1A-201ENST00000301280 DISP3Q9P2K9 1392 aa20.7■□□□□ 0.91
CHAF1A-201ENST00000301280 ADAMTS8Q9UP79 889 aa20.7■□□□□ 0.9
CHAF1A-201ENST00000301280 MLECQ14165 292 aa20.7■□□□□ 0.9
CHAF1A-201ENST00000301280 KIF1BO60333 1816 aa20.69■□□□□ 0.9
CHAF1A-201ENST00000301280 RRP7AQ9Y3A4 280 aaKnown RBP20.68■□□□□ 0.9
CHAF1A-201ENST00000301280 CFAP74Q9C0B2 1584 aa20.67■□□□□ 0.9
CHAF1A-201ENST00000301280 MAP3K4Q9Y6R4 1608 aa20.67■□□□□ 0.9
CHAF1A-201ENST00000301280 MYOM2P54296 1465 aa20.67■□□□□ 0.9
CHAF1A-201ENST00000301280 EFCAB6Q5THR3 1501 aa20.67■□□□□ 0.9
CHAF1A-201ENST00000301280 STAC3Q96MF2 364 aa20.66■□□□□ 0.9
CHAF1A-201ENST00000301280 BLMP54132 1417 aaPredicted RBP20.66■□□□□ 0.9
CHAF1A-201ENST00000301280 RAPGEF3O95398 923 aa20.66■□□□□ 0.9
CHAF1A-201ENST00000301280 NRXN1Q9ULB1 1477 aa20.66■□□□□ 0.9
CHAF1A-201ENST00000301280 MROH2AA6NES4 1674 aa20.65■□□□□ 0.9
CHAF1A-201ENST00000301280 ZC3H13Q5T200 1668 aaKnown RBP20.65■□□□□ 0.9
CHAF1A-201ENST00000301280 PPRC1Q5VV67 1664 aaKnown RBP20.64■□□□□ 0.9
CHAF1A-201ENST00000301280 ABCA6Q8N139 1617 aa20.63■□□□□ 0.89
CHAF1A-201ENST00000301280 FANCAO15360 1455 aa20.63■□□□□ 0.89
CHAF1A-201ENST00000301280 CYB5RLQ6IPT4 315 aa20.61■□□□□ 0.89
CHAF1A-201ENST00000301280 KDM5AP29375 1690 aaKnown RBP20.61■□□□□ 0.89
CHAF1A-201ENST00000301280 CANXP27824 592 aaKnown RBP20.61■□□□□ 0.89
CHAF1A-201ENST00000301280 RGS3P49796 1198 aa20.61■□□□□ 0.89
CHAF1A-201ENST00000301280 C20orf194Q5TEA3 1177 aa20.6■□□□□ 0.89
CHAF1A-201ENST00000301280 PPLO60437 1756 aa20.59■□□□□ 0.89
CHAF1A-201ENST00000301280 PPM1GO15355 546 aaPredicted RBP20.59■□□□□ 0.89
CHAF1A-201ENST00000301280 SETBP1Q9Y6X0 1596 aa20.59■□□□□ 0.89
CHAF1A-201ENST00000301280 APAF1O14727 1248 aa20.58■□□□□ 0.89
CHAF1A-201ENST00000301280 RRP1P56182 461 aaKnown RBP20.58■□□□□ 0.89
CHAF1A-201ENST00000301280 STAG3Q9UJ98 1225 aa20.58■□□□□ 0.89
CHAF1A-201ENST00000301280 SCAF11Q99590 1463 aaKnown RBP20.58■□□□□ 0.89
CHAF1A-201ENST00000301280 ADGRF5Q8IZF2 1346 aa20.58■□□□□ 0.88
CHAF1A-201ENST00000301280 FRAT1Q92837 279 aaPredicted RBP20.58■□□□□ 0.88
CHAF1A-201ENST00000301280 CRBNQ96SW2 442 aa20.58■□□□□ 0.88
CHAF1A-201ENST00000301280 LAS1LQ9Y4W2 734 aaKnown RBP20.57■□□□□ 0.88
CHAF1A-201ENST00000301280 PAK3O75914 559 aaPredicted RBP20.57■□□□□ 0.88
CHAF1A-201ENST00000301280 ANP32AP39687 249 aaKnown RBP20.57■□□□□ 0.88
CHAF1A-201ENST00000301280 BCL2L13Q9BXK5 485 aa20.57■□□□□ 0.88
CHAF1A-201ENST00000301280 FRMPD1Q5SYB0 1578 aa20.57■□□□□ 0.88
CHAF1A-201ENST00000301280 ADGRB3O60242 1522 aa20.56■□□□□ 0.88
CHAF1A-201ENST00000301280 ADGRL1O94910 1474 aa20.55■□□□□ 0.88
CHAF1A-201ENST00000301280 SLC12A5Q9H2X9 1139 aa20.55■□□□□ 0.88
CHAF1A-201ENST00000301280 NPC1L1Q9UHC9 1359 aa20.54■□□□□ 0.88
CHAF1A-201ENST00000301280 HECW2Q9P2P5 1572 aa20.52■□□□□ 0.88
CHAF1A-201ENST00000301280 PIK3C2BO00750 1634 aa20.52■□□□□ 0.88
CHAF1A-201ENST00000301280 PPP2R1AP30153 589 aa20.52■□□□□ 0.88
CHAF1A-201ENST00000301280 ASXL2Q76L83 1435 aa20.51■□□□□ 0.87
CHAF1A-201ENST00000301280 SLC4A3P48751 1232 aa20.51■□□□□ 0.87
CHAF1A-201ENST00000301280 KANK1Q14678 1352 aa20.51■□□□□ 0.87
CHAF1A-201ENST00000301280 ZNF518AQ6AHZ1 1483 aa20.5■□□□□ 0.87
CHAF1A-201ENST00000301280 PLEKHG5O94827 1062 aa20.5■□□□□ 0.87
CHAF1A-201ENST00000301280 CLUAP1Q96AJ1 413 aa20.49■□□□□ 0.87
CHAF1A-201ENST00000301280 MLH3Q9UHC1 1453 aa20.49■□□□□ 0.87
CHAF1A-201ENST00000301280 USP32Q8NFA0 1604 aa20.49■□□□□ 0.87
CHAF1A-201ENST00000301280 MORC1Q86VD1 984 aa20.48■□□□□ 0.87
CHAF1A-201ENST00000301280 CFAP65Q6ZU64 1925 aaKnown RBP20.48■□□□□ 0.87
CHAF1A-201ENST00000301280 U2SURPO15042 1029 aaKnown RBP20.48■□□□□ 0.87
CHAF1A-201ENST00000301280 PDE3BQ13370 1112 aa20.48■□□□□ 0.87
CHAF1A-201ENST00000301280 ZBTB47Q9UFB7 747 aaPredicted RBP20.48■□□□□ 0.87
CHAF1A-201ENST00000301280 ASXL1Q8IXJ9 1541 aa20.48■□□□□ 0.87
CHAF1A-201ENST00000301280 SRPK2P78362 688 aaKnown RBP20.47■□□□□ 0.87
CHAF1A-201ENST00000301280 PIK3C2GO75747 1445 aa20.46■□□□□ 0.87
CHAF1A-201ENST00000301280 SIGLEC1Q9BZZ2 1709 aa20.45■□□□□ 0.87
CHAF1A-201ENST00000301280 CABP2Q9NPB3 220 aa20.45■□□□□ 0.86
CHAF1A-201ENST00000301280 SBNO2Q9Y2G9 1366 aa20.45■□□□□ 0.86
CHAF1A-201ENST00000301280 NUTM2FA1L443 756 aa20.45■□□□□ 0.86
CHAF1A-201ENST00000301280 UGGT1Q9NYU2 1555 aa20.45■□□□□ 0.86
CHAF1A-201ENST00000301280 OSCARQ8IYS5 282 aa20.45■□□□□ 0.86
CHAF1A-201ENST00000301280 BCAR3O75815 825 aa20.44■□□□□ 0.86
CHAF1A-201ENST00000301280 DEKP35659 375 aaKnown RBP20.44■□□□□ 0.86
CHAF1A-201ENST00000301280 CAMSAP1Q5T5Y3 1602 aa20.44■□□□□ 0.86
CHAF1A-201ENST00000301280 POGZQ7Z3K3 1410 aa20.43■□□□□ 0.86
CHAF1A-201ENST00000301280 ERVK-7P63135 1459 aa20.43■□□□□ 0.86
CHAF1A-201ENST00000301280 FBLN1P23142 703 aa20.43■□□□□ 0.86
CHAF1A-201ENST00000301280 NOP58Q9Y2X3 529 aaKnown RBP20.43■□□□□ 0.86
CHAF1A-201ENST00000301280 SOX12O15370 315 aa20.42■□□□□ 0.86
CHAF1A-201ENST00000301280 RICTORQ6R327 1708 aa20.42■□□□□ 0.86
CHAF1A-201ENST00000301280 ADGRB1O14514 1584 aa20.42■□□□□ 0.86
CHAF1A-201ENST00000301280 MINK1Q8N4C8 1332 aaPredicted RBP20.42■□□□□ 0.86
CHAF1A-201ENST00000301280 CDCA8Q53HL2 280 aa20.42■□□□□ 0.86
CHAF1A-201ENST00000301280 SPINK5Q9NQ38 1064 aaPredicted RBP20.41■□□□□ 0.86
CHAF1A-201ENST00000301280 GOLGA2Q08379 1002 aa20.41■□□□□ 0.86
CHAF1A-201ENST00000301280 QRICH2Q9H0J4 1663 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms