RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 IQGAP1P46940 1657 aa17.09■□□□□ 0.33
HIF3A-204ENST00000300862 ARAP3Q8WWN8 1544 aa17.08■□□□□ 0.32
HIF3A-204ENST00000300862 CDCA8Q53HL2 280 aa17.08■□□□□ 0.32
HIF3A-204ENST00000300862 NOP58Q9Y2X3 529 aaKnown RBP17.08■□□□□ 0.32
HIF3A-204ENST00000300862 CEP152O94986 1710 aa17.08■□□□□ 0.32
HIF3A-204ENST00000300862 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
HIF3A-204ENST00000300862 CHGAP10645 457 aaKnown RBP17.07■□□□□ 0.32
HIF3A-204ENST00000300862 DEPDC5O75140 1603 aa17.07■□□□□ 0.32
HIF3A-204ENST00000300862 TET3O43151 1660 aa17.06■□□□□ 0.32
HIF3A-204ENST00000300862 ASXL2Q76L83 1435 aa17.06■□□□□ 0.32
HIF3A-204ENST00000300862 INO80Q9ULG1 1556 aaPredicted RBP17.06■□□□□ 0.32
HIF3A-204ENST00000300862 PLEKHH1Q9ULM0 1364 aa17.05■□□□□ 0.32
HIF3A-204ENST00000300862 ABCA9Q8IUA7 1624 aa17.05■□□□□ 0.32
HIF3A-204ENST00000300862 SKAP1Q86WV1 359 aa17.05■□□□□ 0.32
HIF3A-204ENST00000300862 CCDC146Q8IYE0 955 aa17.05■□□□□ 0.32
HIF3A-204ENST00000300862 CRBNQ96SW2 442 aa17.05■□□□□ 0.32
HIF3A-204ENST00000300862 C20orf194Q5TEA3 1177 aa17.04■□□□□ 0.32
HIF3A-204ENST00000300862 STAC3Q96MF2 364 aa17.04■□□□□ 0.32
HIF3A-204ENST00000300862 VWDEQ8N2E2 1590 aa17.03■□□□□ 0.32
HIF3A-204ENST00000300862 EIF3AQ14152 1382 aaKnown RBP17.02■□□□□ 0.32
HIF3A-204ENST00000300862 ZMYM4Q5VZL5 1548 aa17.02■□□□□ 0.31
HIF3A-204ENST00000300862 INSRP06213 1382 aa17.02■□□□□ 0.31
HIF3A-204ENST00000300862 GGT6Q6P531 493 aa17.01■□□□□ 0.31
HIF3A-204ENST00000300862 MROH1Q8NDA8 1641 aa17.01■□□□□ 0.31
HIF3A-204ENST00000300862 ASXL1Q8IXJ9 1541 aa17.01■□□□□ 0.31
HIF3A-204ENST00000300862 NBR1Q14596 966 aa17.01■□□□□ 0.31
HIF3A-204ENST00000300862 CARD14Q9BXL6 1004 aa17.01■□□□□ 0.31
HIF3A-204ENST00000300862 SYNMO15061 1565 aa17■□□□□ 0.31
HIF3A-204ENST00000300862 ANP32AP39687 249 aaKnown RBP17■□□□□ 0.31
HIF3A-204ENST00000300862 NPM2Q86SE8 214 aaKnown RBP17■□□□□ 0.31
HIF3A-204ENST00000300862 DUSP27Q5VZP5 1158 aa16.99■□□□□ 0.31
HIF3A-204ENST00000300862 CFAP65Q6ZU64 1925 aaKnown RBP16.98■□□□□ 0.31
HIF3A-204ENST00000300862 TRAK1Q9UPV9 953 aa16.98■□□□□ 0.31
HIF3A-204ENST00000300862 MYOM1P52179 1685 aa16.98■□□□□ 0.31
HIF3A-204ENST00000300862 ERVK-7P63135 1459 aa16.97■□□□□ 0.31
HIF3A-204ENST00000300862 ABCA6Q8N139 1617 aa16.97■□□□□ 0.31
HIF3A-204ENST00000300862 APAF1O14727 1248 aa16.97■□□□□ 0.31
HIF3A-204ENST00000300862 GOLGA2Q08379 1002 aa16.97■□□□□ 0.31
HIF3A-204ENST00000300862 IPO9Q96P70 1041 aaKnown RBP16.97■□□□□ 0.31
HIF3A-204ENST00000300862 NPM1P06748 294 aaKnown RBP eCLIP16.96■□□□□ 0.31
HIF3A-204ENST00000300862 NOS1P29475 1434 aa16.96■□□□□ 0.31
HIF3A-204ENST00000300862 MAP3K4Q9Y6R4 1608 aa16.96■□□□□ 0.31
HIF3A-204ENST00000300862 KIDINS220Q9ULH0 1771 aa16.96■□□□□ 0.31
HIF3A-204ENST00000300862 TCERG1O14776 1098 aaKnown RBP16.96■□□□□ 0.31
HIF3A-204ENST00000300862 TMEM132EQ6IEE7 984 aa16.96■□□□□ 0.31
HIF3A-204ENST00000300862 ZNF521Q96K83 1311 aa16.96■□□□□ 0.31
HIF3A-204ENST00000300862 NUTM2DQ5VT03 806 aaPredicted RBP16.95■□□□□ 0.3
HIF3A-204ENST00000300862 SENP3Q9H4L4 574 aaPredicted RBP16.95■□□□□ 0.3
HIF3A-204ENST00000300862 SPINK5Q9NQ38 1064 aaPredicted RBP16.95■□□□□ 0.3
HIF3A-204ENST00000300862 EFCAB6Q5THR3 1501 aa16.95■□□□□ 0.3
HIF3A-204ENST00000300862 PPRC1Q5VV67 1664 aaKnown RBP16.95■□□□□ 0.3
HIF3A-204ENST00000300862 PDE4AP27815 886 aa16.95■□□□□ 0.3
HIF3A-204ENST00000300862 PIK3C2GO75747 1445 aa16.95■□□□□ 0.3
HIF3A-204ENST00000300862 TNNT2P45379 298 aaPredicted RBP16.94■□□□□ 0.3
HIF3A-204ENST00000300862 KDM5AP29375 1690 aaKnown RBP16.94■□□□□ 0.3
HIF3A-204ENST00000300862 MYOM2P54296 1465 aa16.94■□□□□ 0.3
HIF3A-204ENST00000300862 MROH2AA6NES4 1674 aa16.93■□□□□ 0.3
HIF3A-204ENST00000300862 KIF1BO60333 1816 aa16.93■□□□□ 0.3
HIF3A-204ENST00000300862 NPC1L1Q9UHC9 1359 aa16.92■□□□□ 0.3
HIF3A-204ENST00000300862 ZNF518AQ6AHZ1 1483 aa16.92■□□□□ 0.3
HIF3A-204ENST00000300862 SLFN5Q08AF3 891 aa16.92■□□□□ 0.3
HIF3A-204ENST00000300862 SLC12A5Q9H2X9 1139 aa16.92■□□□□ 0.3
HIF3A-204ENST00000300862 CENPJQ9HC77 1338 aaPredicted RBP16.92■□□□□ 0.3
HIF3A-204ENST00000300862 KIAA1210Q9ULL0 1709 aa16.92■□□□□ 0.3
HIF3A-204ENST00000300862 ZBTB47Q9UFB7 747 aaPredicted RBP16.91■□□□□ 0.3
HIF3A-204ENST00000300862 DMRT2Q9Y5R5 561 aa16.91■□□□□ 0.3
HIF3A-204ENST00000300862 NPATQ14207 1427 aa16.91■□□□□ 0.3
HIF3A-204ENST00000300862 CD109Q6YHK3 1445 aa16.91■□□□□ 0.3
HIF3A-204ENST00000300862 RAPGEF3O95398 923 aa16.9■□□□□ 0.3
HIF3A-204ENST00000300862 BACH2Q9BYV9 841 aa16.9■□□□□ 0.3
HIF3A-204ENST00000300862 BCAR3O75815 825 aa16.87■□□□□ 0.29
HIF3A-204ENST00000300862 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
HIF3A-204ENST00000300862 NEURL4Q96JN8 1562 aa16.87■□□□□ 0.29
HIF3A-204ENST00000300862 C14orf93Q9H972 538 aaKnown RBP16.87■□□□□ 0.29
HIF3A-204ENST00000300862 NRXN1Q9ULB1 1477 aa16.86■□□□□ 0.29
HIF3A-204ENST00000300862 POGZQ7Z3K3 1410 aa16.86■□□□□ 0.29
HIF3A-204ENST00000300862 IFT172Q9UG01 1749 aa16.86■□□□□ 0.29
HIF3A-204ENST00000300862 MS4A1P11836 297 aa16.86■□□□□ 0.29
HIF3A-204ENST00000300862 NEUROD2Q15784 382 aa16.86■□□□□ 0.29
HIF3A-204ENST00000300862 MORC1Q86VD1 984 aa16.86■□□□□ 0.29
HIF3A-204ENST00000300862 NSD3Q9BZ95 1437 aa16.86■□□□□ 0.29
HIF3A-204ENST00000300862 ADGRB3O60242 1522 aa16.85■□□□□ 0.29
HIF3A-204ENST00000300862 TRMT2AQ8IZ69 625 aaKnown RBP16.85■□□□□ 0.29
HIF3A-204ENST00000300862 LMTK2Q8IWU2 1503 aa16.85■□□□□ 0.29
HIF3A-204ENST00000300862 FRMPD1Q5SYB0 1578 aa16.85■□□□□ 0.29
HIF3A-204ENST00000300862 SAFB2Q14151 953 aaKnown RBP eCLIP16.84■□□□□ 0.29
HIF3A-204ENST00000300862 RRP7AQ9Y3A4 280 aaKnown RBP16.84■□□□□ 0.29
HIF3A-204ENST00000300862 KDM2BQ8NHM5 1336 aa16.84■□□□□ 0.29
HIF3A-204ENST00000300862 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.83■□□□□ 0.28
HIF3A-204ENST00000300862 SBNO2Q9Y2G9 1366 aa16.82■□□□□ 0.28
HIF3A-204ENST00000300862 E9PSI1 815 aa16.81■□□□□ 0.28
HIF3A-204ENST00000300862 RTL5Q5HYW3 569 aaPredicted RBP16.81■□□□□ 0.28
HIF3A-204ENST00000300862 MLH3Q9UHC1 1453 aa16.81■□□□□ 0.28
HIF3A-204ENST00000300862 NKTRP30414 1462 aaKnown RBP16.8■□□□□ 0.28
HIF3A-204ENST00000300862 WWC1Q8IX03 1113 aa16.8■□□□□ 0.28
HIF3A-204ENST00000300862 CENPQQ7L2Z9 268 aaPredicted RBP16.8■□□□□ 0.28
HIF3A-204ENST00000300862 ADGRB1O14514 1584 aa16.79■□□□□ 0.28
HIF3A-204ENST00000300862 MTHFSP49914 203 aa16.79■□□□□ 0.28
HIF3A-204ENST00000300862 STK26Q9P289 416 aa16.79■□□□□ 0.28
HIF3A-204ENST00000300862 MYO3AQ8NEV4 1616 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms