RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 RBM10P98175 930 aaKnown RBP13.93□□□□□ -0.18
SNX20-201ENST00000300590 PLEKHH2Q8IVE3 1493 aa13.93□□□□□ -0.18
SNX20-201ENST00000300590 C22orf23Q9BZE7 217 aa13.93□□□□□ -0.18
SNX20-201ENST00000300590 ERBINQ96RT1 1412 aa13.92□□□□□ -0.18
SNX20-201ENST00000300590 RLBP1P12271 317 aa13.92□□□□□ -0.18
SNX20-201ENST00000300590 LAMC3Q9Y6N6 1575 aa13.91□□□□□ -0.18
SNX20-201ENST00000300590 PDE3AQ14432 1141 aa13.91□□□□□ -0.18
SNX20-201ENST00000300590 CCDC144AA2RUR9 1427 aa13.91□□□□□ -0.18
SNX20-201ENST00000300590 NKTRP30414 1462 aaKnown RBP13.9□□□□□ -0.18
SNX20-201ENST00000300590 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.18
SNX20-201ENST00000300590 GAS2L3Q86XJ1 694 aa13.9□□□□□ -0.18
SNX20-201ENST00000300590 WDR62O43379 1518 aa13.9□□□□□ -0.18
SNX20-201ENST00000300590 AMER1Q5JTC6 1135 aaPredicted RBP13.9□□□□□ -0.18
SNX20-201ENST00000300590 HSCBQ8IWL3 235 aa13.9□□□□□ -0.18
SNX20-201ENST00000300590 ZNF608Q9ULD9 1512 aaPredicted RBP13.9□□□□□ -0.18
SNX20-201ENST00000300590 PMFBP1Q8TBY8 1022 aa13.9□□□□□ -0.18
SNX20-201ENST00000300590 KIAA1211Q6ZU35 1233 aa13.89□□□□□ -0.19
SNX20-201ENST00000300590 PRAG1Q86YV5 1406 aa13.89□□□□□ -0.19
SNX20-201ENST00000300590 TRMT2AQ8IZ69 625 aaKnown RBP13.89□□□□□ -0.19
SNX20-201ENST00000300590 FBLN2P98095 1184 aa13.87□□□□□ -0.19
SNX20-201ENST00000300590 E9PCH4 1651 aa13.87□□□□□ -0.19
SNX20-201ENST00000300590 RWDD1Q9H446 243 aaPredicted RBP13.87□□□□□ -0.19
SNX20-201ENST00000300590 GPATCH8Q9UKJ3 1502 aaKnown RBP13.87□□□□□ -0.19
SNX20-201ENST00000300590 NUP153P49790 1475 aaKnown RBP13.87□□□□□ -0.19
SNX20-201ENST00000300590 COL17A1Q9UMD9 1497 aaPredicted RBP13.87□□□□□ -0.19
SNX20-201ENST00000300590 IQGAP2Q13576 1575 aa13.87□□□□□ -0.19
SNX20-201ENST00000300590 ARHGEF12Q9NZN5 1544 aa13.86□□□□□ -0.19
SNX20-201ENST00000300590 PLEKHD1A6NEE1 506 aa13.86□□□□□ -0.19
SNX20-201ENST00000300590 FAM13BQ9NYF5 915 aa13.86□□□□□ -0.19
SNX20-201ENST00000300590 NLRP1Q9C000 1473 aa13.86□□□□□ -0.19
SNX20-201ENST00000300590 DDX11L8A8MPP1 907 aa13.85□□□□□ -0.19
SNX20-201ENST00000300590 SLC24A1O60721 1099 aa13.85□□□□□ -0.19
SNX20-201ENST00000300590 WWC1Q8IX03 1113 aa13.85□□□□□ -0.19
SNX20-201ENST00000300590 C9orf84Q5VXU9 1444 aa13.85□□□□□ -0.19
SNX20-201ENST00000300590 HSP90AB1P08238 724 aaKnown RBP13.85□□□□□ -0.19
SNX20-201ENST00000300590 MAGI2Q86UL8 1455 aa13.85□□□□□ -0.19
SNX20-201ENST00000300590 ZBTB7CA1YPR0 619 aa13.84□□□□□ -0.19
SNX20-201ENST00000300590 TNPO1Q92973 898 aaKnown RBP13.84□□□□□ -0.19
SNX20-201ENST00000300590 INSRP06213 1382 aa13.84□□□□□ -0.19
SNX20-201ENST00000300590 TROQ12816 1431 aaPredicted RBP13.84□□□□□ -0.19
SNX20-201ENST00000300590 RARSP54136 660 aaKnown RBP13.84□□□□□ -0.19
SNX20-201ENST00000300590 NCLP19338 710 aaKnown RBP13.84□□□□□ -0.19
SNX20-201ENST00000300590 FTSJ3Q8IY81 847 aaKnown RBP13.83□□□□□ -0.2
SNX20-201ENST00000300590 PDCL3Q9H2J4 239 aa13.82□□□□□ -0.2
SNX20-201ENST00000300590 ANP32BQ92688 251 aaKnown RBP13.82□□□□□ -0.2
SNX20-201ENST00000300590 TPM2P07951 284 aa13.81□□□□□ -0.2
SNX20-201ENST00000300590 MSNP26038 577 aaKnown RBP13.81□□□□□ -0.2
SNX20-201ENST00000300590 R3HCC1Q9Y3T6 440 aaKnown RBP13.81□□□□□ -0.2
SNX20-201ENST00000300590 GBP4Q96PP9 640 aa13.8□□□□□ -0.2
SNX20-201ENST00000300590 PLB1Q6P1J6 1458 aa13.8□□□□□ -0.2
SNX20-201ENST00000300590 NASPP49321 788 aaPredicted RBP13.79□□□□□ -0.2
SNX20-201ENST00000300590 ADGRL2O95490 1459 aa13.79□□□□□ -0.2
SNX20-201ENST00000300590 DNAJC5BQ9UF47 199 aa13.79□□□□□ -0.2
SNX20-201ENST00000300590 A2MP01023 1474 aa13.79□□□□□ -0.2
SNX20-201ENST00000300590 TCP11L2Q8N4U5 519 aa13.79□□□□□ -0.2
SNX20-201ENST00000300590 KIF21AQ7Z4S6 1674 aa13.78□□□□□ -0.2
SNX20-201ENST00000300590 ITPRIPQ8IWB1 547 aa13.78□□□□□ -0.2
SNX20-201ENST00000300590 KDM5DQ9BY66 1539 aa13.78□□□□□ -0.2
SNX20-201ENST00000300590 CDCA8Q53HL2 280 aa13.77□□□□□ -0.2
SNX20-201ENST00000300590 ZNF692Q9BU19 519 aaPredicted RBP13.77□□□□□ -0.2
SNX20-201ENST00000300590 DDX49Q9Y6V7 483 aaKnown RBP13.77□□□□□ -0.2
SNX20-201ENST00000300590 LNPKQ9C0E8 428 aa13.77□□□□□ -0.21
SNX20-201ENST00000300590 GPRASP1Q5JY77 1395 aa13.76□□□□□ -0.21
SNX20-201ENST00000300590 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
SNX20-201ENST00000300590 WDR7Q9Y4E6 1490 aa13.76□□□□□ -0.21
SNX20-201ENST00000300590 SSFA2P28290 1259 aa13.75□□□□□ -0.21
SNX20-201ENST00000300590 ZSCAN30Q86W11 494 aa13.75□□□□□ -0.21
SNX20-201ENST00000300590 CEP170Q5SW79 1584 aa13.75□□□□□ -0.21
SNX20-201ENST00000300590 XPCQ01831 940 aaPredicted RBP13.75□□□□□ -0.21
SNX20-201ENST00000300590 TSR2Q969E8 191 aaKnown RBP13.75□□□□□ -0.21
SNX20-201ENST00000300590 MVPQ14764 893 aaKnown RBP13.75□□□□□ -0.21
SNX20-201ENST00000300590 DZIP1LQ8IYY4 767 aaKnown RBP13.75□□□□□ -0.21
SNX20-201ENST00000300590 TRPM1Q7Z4N2 1603 aa13.75□□□□□ -0.21
SNX20-201ENST00000300590 PRDM10Q9NQV6 1147 aa13.74□□□□□ -0.21
SNX20-201ENST00000300590 ADGBQ8N7X0 1667 aa13.74□□□□□ -0.21
SNX20-201ENST00000300590 CD2BP2O95400 341 aaKnown RBP13.74□□□□□ -0.21
SNX20-201ENST00000300590 RIPK4P57078 832 aa13.74□□□□□ -0.21
SNX20-201ENST00000300590 CARD14Q9BXL6 1004 aa13.74□□□□□ -0.21
SNX20-201ENST00000300590 SMC4Q9NTJ3 1288 aa13.74□□□□□ -0.21
SNX20-201ENST00000300590 CCDC173Q0VFZ6 552 aa13.73□□□□□ -0.21
SNX20-201ENST00000300590 ZKSCAN2Q63HK3 967 aa13.73□□□□□ -0.21
SNX20-201ENST00000300590 MORC1Q86VD1 984 aa13.73□□□□□ -0.21
SNX20-201ENST00000300590 DISP1Q96F81 1524 aa13.72□□□□□ -0.21
SNX20-201ENST00000300590 FAM135AQ9P2D6 1515 aa13.72□□□□□ -0.21
SNX20-201ENST00000300590 ISY1Q9ULR0 285 aaKnown RBP13.72□□□□□ -0.21
SNX20-201ENST00000300590 GOLGA6L22H0YM25 854 aa13.72□□□□□ -0.21
SNX20-201ENST00000300590 PLA2R1Q13018 1463 aa13.72□□□□□ -0.21
SNX20-201ENST00000300590 OFD1O75665 1012 aa13.72□□□□□ -0.21
SNX20-201ENST00000300590 SKOR2Q2VWA4 1001 aaPredicted RBP13.72□□□□□ -0.21
SNX20-201ENST00000300590 RAPGEF6Q8TEU7 1601 aa13.71□□□□□ -0.21
SNX20-201ENST00000300590 CAVIN1Q6NZI2 390 aaKnown RBP13.71□□□□□ -0.21
SNX20-201ENST00000300590 RUNDC1Q96C34 613 aa13.71□□□□□ -0.21
SNX20-201ENST00000300590 PIK3C2GO75747 1445 aa13.71□□□□□ -0.22
SNX20-201ENST00000300590 RAB3GAP1Q15042 981 aa13.7□□□□□ -0.22
SNX20-201ENST00000300590 MCTP1Q6DN14 999 aa13.7□□□□□ -0.22
SNX20-201ENST00000300590 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.7□□□□□ -0.22
SNX20-201ENST00000300590 CHMP7Q8WUX9 453 aaPredicted RBP13.7□□□□□ -0.22
SNX20-201ENST00000300590 NINLQ9Y2I6 1382 aa13.7□□□□□ -0.22
SNX20-201ENST00000300590 ASXL1Q8IXJ9 1541 aa13.7□□□□□ -0.22
SNX20-201ENST00000300590 UQCRHLA0A096LP55 91 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms