RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 PSME1Q06323 249 aa10.76□□□□□ -0.69
SNRPD1-201ENST00000300413 PROSER2Q86WR7 435 aaPredicted RBP10.75□□□□□ -0.69
SNRPD1-201ENST00000300413 KIF7Q2M1P5 1343 aa10.75□□□□□ -0.69
SNRPD1-201ENST00000300413 FTSJ3Q8IY81 847 aaKnown RBP10.75□□□□□ -0.69
SNRPD1-201ENST00000300413 NEUROD2Q15784 382 aa10.75□□□□□ -0.69
SNRPD1-201ENST00000300413 SOX12O15370 315 aa10.75□□□□□ -0.69
SNRPD1-201ENST00000300413 PRKRIP1Q9H875 184 aaPredicted RBP10.74□□□□□ -0.69
SNRPD1-201ENST00000300413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.74□□□□□ -0.69
SNRPD1-201ENST00000300413 IDI1Q13907 227 aa10.74□□□□□ -0.69
SNRPD1-201ENST00000300413 TMEM132EQ6IEE7 984 aa10.74□□□□□ -0.69
SNRPD1-201ENST00000300413 ZFYVE16Q7Z3T8 1539 aa10.74□□□□□ -0.69
SNRPD1-201ENST00000300413 PRAM1Q96QH2 718 aa10.73□□□□□ -0.69
SNRPD1-201ENST00000300413 ADGBQ8N7X0 1667 aa10.73□□□□□ -0.69
SNRPD1-201ENST00000300413 LAS1LQ9Y4W2 734 aaKnown RBP10.73□□□□□ -0.69
SNRPD1-201ENST00000300413 IPO8O15397 1037 aaKnown RBP10.72□□□□□ -0.69
SNRPD1-201ENST00000300413 PREX2Q70Z35 1606 aa10.72□□□□□ -0.69
SNRPD1-201ENST00000300413 NBPF8Q3BBV2 869 aa10.71□□□□□ -0.69
SNRPD1-201ENST00000300413 MLH3Q9UHC1 1453 aa10.71□□□□□ -0.69
SNRPD1-201ENST00000300413 MAGI3Q5TCQ9 1506 aa10.71□□□□□ -0.69
SNRPD1-201ENST00000300413 ADCY10Q96PN6 1610 aa10.71□□□□□ -0.7
SNRPD1-201ENST00000300413 NINLQ9Y2I6 1382 aa10.71□□□□□ -0.7
SNRPD1-201ENST00000300413 MYT1Q01538 1121 aa10.7□□□□□ -0.7
SNRPD1-201ENST00000300413 ERICH6BQ5W0A0 696 aa10.7□□□□□ -0.7
SNRPD1-201ENST00000300413 HDAC5Q9UQL6 1122 aa10.7□□□□□ -0.7
SNRPD1-201ENST00000300413 SCAF11Q99590 1463 aaKnown RBP10.7□□□□□ -0.7
SNRPD1-201ENST00000300413 MAST1Q9Y2H9 1570 aa10.7□□□□□ -0.7
SNRPD1-201ENST00000300413 NUTM2FA1L443 756 aa10.7□□□□□ -0.7
SNRPD1-201ENST00000300413 ABCC1P33527 1531 aa10.7□□□□□ -0.7
SNRPD1-201ENST00000300413 ARHGEF12Q9NZN5 1544 aa10.7□□□□□ -0.7
SNRPD1-201ENST00000300413 NBPF1Q3BBV0 1214 aa10.7□□□□□ -0.7
SNRPD1-201ENST00000300413 EIF2AK4Q9P2K8 1649 aaKnown RBP10.7□□□□□ -0.7
SNRPD1-201ENST00000300413 C14orf93Q9H972 538 aaKnown RBP10.69□□□□□ -0.7
SNRPD1-201ENST00000300413 DIAPH1O60610 1272 aaKnown RBP10.69□□□□□ -0.7
SNRPD1-201ENST00000300413 BRD4O60885 1362 aaPredicted RBP10.69□□□□□ -0.7
SNRPD1-201ENST00000300413 SHROOM2Q13796 1616 aa10.68□□□□□ -0.7
SNRPD1-201ENST00000300413 MBD5Q9P267 1494 aa10.68□□□□□ -0.7
SNRPD1-201ENST00000300413 GOLGA2Q08379 1002 aa10.68□□□□□ -0.7
SNRPD1-201ENST00000300413 NOS1P29475 1434 aa10.68□□□□□ -0.7
SNRPD1-201ENST00000300413 ANP32AP39687 249 aaKnown RBP10.68□□□□□ -0.7
SNRPD1-201ENST00000300413 FBXO31Q5XUX0 539 aaPredicted RBP10.68□□□□□ -0.7
SNRPD1-201ENST00000300413 CABP2Q9NPB3 220 aa10.68□□□□□ -0.7
SNRPD1-201ENST00000300413 CDK19Q9BWU1 502 aa10.68□□□□□ -0.7
SNRPD1-201ENST00000300413 GCC2Q8IWJ2 1684 aa10.67□□□□□ -0.7
SNRPD1-201ENST00000300413 ZMYM3Q14202 1370 aa10.66□□□□□ -0.7
SNRPD1-201ENST00000300413 CCDC61Q9Y6R9 512 aa10.66□□□□□ -0.7
SNRPD1-201ENST00000300413 SLC26A8Q96RN1 970 aa10.66□□□□□ -0.7
SNRPD1-201ENST00000300413 TTC37Q6PGP7 1564 aa10.65□□□□□ -0.7
SNRPD1-201ENST00000300413 SAMD9LQ8IVG5 1584 aa10.65□□□□□ -0.7
SNRPD1-201ENST00000300413 PUS7Q96PZ0 661 aaKnown RBP10.65□□□□□ -0.7
SNRPD1-201ENST00000300413 RALGAPBQ86X10 1494 aa10.65□□□□□ -0.7
SNRPD1-201ENST00000300413 RIMS2Q9UQ26 1411 aa10.65□□□□□ -0.7
SNRPD1-201ENST00000300413 STK31Q9BXU1 1019 aa10.65□□□□□ -0.7
SNRPD1-201ENST00000300413 ERCC6L2Q5T890 1561 aa10.65□□□□□ -0.71
SNRPD1-201ENST00000300413 EVA1CP58658 441 aa10.65□□□□□ -0.71
SNRPD1-201ENST00000300413 C1orf141Q5JVX7 400 aa10.65□□□□□ -0.71
SNRPD1-201ENST00000300413 HECW2Q9P2P5 1572 aa10.64□□□□□ -0.71
SNRPD1-201ENST00000300413 ESCO1Q5FWF5 840 aa10.64□□□□□ -0.71
SNRPD1-201ENST00000300413 CCDC9Q9Y3X0 531 aaKnown RBP10.64□□□□□ -0.71
SNRPD1-201ENST00000300413 ADGRF5Q8IZF2 1346 aa10.64□□□□□ -0.71
SNRPD1-201ENST00000300413 NLRP6P59044 892 aa10.63□□□□□ -0.71
SNRPD1-201ENST00000300413 SMG6Q86US8 1419 aaKnown RBP10.63□□□□□ -0.71
SNRPD1-201ENST00000300413 PZPP20742 1482 aa10.63□□□□□ -0.71
SNRPD1-201ENST00000300413 CFAP44Q96MT7 982 aa10.63□□□□□ -0.71
SNRPD1-201ENST00000300413 PPP4R2Q9NY27 417 aa10.63□□□□□ -0.71
SNRPD1-201ENST00000300413 LRPPRCP42704 1394 aaKnown RBP10.63□□□□□ -0.71
SNRPD1-201ENST00000300413 KDM5DQ9BY66 1539 aa10.63□□□□□ -0.71
SNRPD1-201ENST00000300413 E9PSI1 815 aa10.62□□□□□ -0.71
SNRPD1-201ENST00000300413 BCL11AQ9H165 835 aa10.62□□□□□ -0.71
SNRPD1-201ENST00000300413 NSD2O96028 1365 aa10.62□□□□□ -0.71
SNRPD1-201ENST00000300413 FRAT1Q92837 279 aaPredicted RBP10.62□□□□□ -0.71
SNRPD1-201ENST00000300413 CEBPAP49715 358 aaPredicted RBP10.62□□□□□ -0.71
SNRPD1-201ENST00000300413 RTL5Q5HYW3 569 aaPredicted RBP10.62□□□□□ -0.71
SNRPD1-201ENST00000300413 RUNDC1Q96C34 613 aa10.62□□□□□ -0.71
SNRPD1-201ENST00000300413 DNAJC5Q9H3Z4 198 aa10.62□□□□□ -0.71
SNRPD1-201ENST00000300413 SUPT16HQ9Y5B9 1047 aaKnown RBP10.62□□□□□ -0.71
SNRPD1-201ENST00000300413 AMOTL2Q9Y2J4 779 aa10.62□□□□□ -0.71
SNRPD1-201ENST00000300413 ARXQ96QS3 562 aa10.61□□□□□ -0.71
SNRPD1-201ENST00000300413 ZBED9Q6R2W3 1325 aa10.61□□□□□ -0.71
SNRPD1-201ENST00000300413 ABTB2Q8N961 1025 aa10.61□□□□□ -0.71
SNRPD1-201ENST00000300413 RCAN3Q9UKA8 241 aa10.61□□□□□ -0.71
SNRPD1-201ENST00000300413 PRAG1Q86YV5 1406 aa10.61□□□□□ -0.71
SNRPD1-201ENST00000300413 CASC1Q6TDU7 716 aa10.61□□□□□ -0.71
SNRPD1-201ENST00000300413 NUDT16Q96DE0 195 aaKnown RBP10.61□□□□□ -0.71
SNRPD1-201ENST00000300413 ABCA9Q8IUA7 1624 aa10.61□□□□□ -0.71
SNRPD1-201ENST00000300413 PLXNC1O60486 1568 aa10.6□□□□□ -0.71
SNRPD1-201ENST00000300413 UHRF1BP1Q6BDS2 1440 aa10.6□□□□□ -0.71
SNRPD1-201ENST00000300413 KCNH5Q8NCM2 988 aa10.6□□□□□ -0.71
SNRPD1-201ENST00000300413 LTV1Q96GA3 475 aaPredicted RBP10.6□□□□□ -0.71
SNRPD1-201ENST00000300413 CABP1Q9NZU7 370 aa10.6□□□□□ -0.71
SNRPD1-201ENST00000300413 WASLO00401 505 aaPredicted RBP10.6□□□□□ -0.71
SNRPD1-201ENST00000300413 RAPGEF4Q8WZA2 1011 aa10.6□□□□□ -0.71
SNRPD1-201ENST00000300413 GGNBP2Q9H3C7 697 aa10.59□□□□□ -0.71
SNRPD1-201ENST00000300413 TEFQ10587 303 aa10.59□□□□□ -0.71
SNRPD1-201ENST00000300413 NPHP1O15259 732 aa10.59□□□□□ -0.71
SNRPD1-201ENST00000300413 CADPS2Q86UW7 1296 aa10.59□□□□□ -0.71
SNRPD1-201ENST00000300413 TBX22Q9Y458 520 aa10.59□□□□□ -0.71
SNRPD1-201ENST00000300413 HMGB2P26583 209 aaKnown RBP10.58□□□□□ -0.72
SNRPD1-201ENST00000300413 SLC12A5Q9H2X9 1139 aa10.58□□□□□ -0.72
SNRPD1-201ENST00000300413 GAS2L2Q8NHY3 880 aa10.58□□□□□ -0.72
SNRPD1-201ENST00000300413 PPP2R1AP30153 589 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms