RNA–Protein interactions for RNA: ENST00000300227.12

CCDC178-201, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC178, Length 3,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-201ENST00000300227 ERVK-7P63135 1459 aa19.27■□□□□ 0.68
CCDC178-201ENST00000300227 YTHDC1Q96MU7 727 aaKnown RBP19.26■□□□□ 0.67
CCDC178-201ENST00000300227 MADDQ8WXG6 1647 aa19.25■□□□□ 0.67
CCDC178-201ENST00000300227 ANP32CO43423 234 aa19.24■□□□□ 0.67
CCDC178-201ENST00000300227 RPGRIP1LQ68CZ1 1315 aa19.24■□□□□ 0.67
CCDC178-201ENST00000300227 PREX1Q8TCU6 1659 aa19.23■□□□□ 0.67
CCDC178-201ENST00000300227 NEURL4Q96JN8 1562 aa19.23■□□□□ 0.67
CCDC178-201ENST00000300227 CEBPAP49715 358 aaPredicted RBP19.23■□□□□ 0.67
CCDC178-201ENST00000300227 MYOM2P54296 1465 aa19.22■□□□□ 0.67
CCDC178-201ENST00000300227 VGFO15240 615 aaPredicted RBP19.22■□□□□ 0.67
CCDC178-201ENST00000300227 PIK3C2BO00750 1634 aa19.2■□□□□ 0.66
CCDC178-201ENST00000300227 CNGB1Q14028 1251 aaPredicted RBP19.2■□□□□ 0.66
CCDC178-201ENST00000300227 TMEM132EQ6IEE7 984 aa19.19■□□□□ 0.66
CCDC178-201ENST00000300227 TESK2Q96S53 571 aa19.18■□□□□ 0.66
CCDC178-201ENST00000300227 C14orf93Q9H972 538 aaKnown RBP19.16■□□□□ 0.66
CCDC178-201ENST00000300227 SCAF11Q99590 1463 aaKnown RBP19.15■□□□□ 0.66
CCDC178-201ENST00000300227 TRAK1Q9UPV9 953 aa19.15■□□□□ 0.66
CCDC178-201ENST00000300227 PIK3C2GO75747 1445 aa19.15■□□□□ 0.66
CCDC178-201ENST00000300227 SPATA31D1Q6ZQQ2 1576 aa19.15■□□□□ 0.66
CCDC178-201ENST00000300227 TNRQ92752 1358 aa19.15■□□□□ 0.66
CCDC178-201ENST00000300227 NRXN1Q9ULB1 1477 aa19.15■□□□□ 0.66
CCDC178-201ENST00000300227 NEXMIFQ5QGS0 1516 aa19.14■□□□□ 0.65
CCDC178-201ENST00000300227 TMF1P82094 1093 aa19.14■□□□□ 0.65
CCDC178-201ENST00000300227 DISP3Q9P2K9 1392 aa19.13■□□□□ 0.65
CCDC178-201ENST00000300227 IFT172Q9UG01 1749 aa19.13■□□□□ 0.65
CCDC178-201ENST00000300227 TMEM131LA2VDJ0 1609 aa19.12■□□□□ 0.65
CCDC178-201ENST00000300227 LAMC1P11047 1609 aa19.12■□□□□ 0.65
CCDC178-201ENST00000300227 PPLO60437 1756 aa19.12■□□□□ 0.65
CCDC178-201ENST00000300227 EIF3AQ14152 1382 aaKnown RBP19.1■□□□□ 0.65
CCDC178-201ENST00000300227 A2ML1A8K2U0 1454 aa19.1■□□□□ 0.65
CCDC178-201ENST00000300227 STK26Q9P289 416 aa19.09■□□□□ 0.65
CCDC178-201ENST00000300227 MYO5BQ9ULV0 1848 aa19.08■□□□□ 0.64
CCDC178-201ENST00000300227 RIMS2Q9UQ26 1411 aa19.07■□□□□ 0.64
CCDC178-201ENST00000300227 BCANQ96GW7 911 aa19.06■□□□□ 0.64
CCDC178-201ENST00000300227 KIAA1210Q9ULL0 1709 aa19.06■□□□□ 0.64
CCDC178-201ENST00000300227 ZFYVE9O95405 1425 aa19.05■□□□□ 0.64
CCDC178-201ENST00000300227 IQGAP1P46940 1657 aa19.05■□□□□ 0.64
CCDC178-201ENST00000300227 SAFB2Q14151 953 aaKnown RBP eCLIP19.04■□□□□ 0.64
CCDC178-201ENST00000300227 CENPJQ9HC77 1338 aaPredicted RBP19.04■□□□□ 0.64
CCDC178-201ENST00000300227 PRKRIP1Q9H875 184 aaPredicted RBP19.04■□□□□ 0.64
CCDC178-201ENST00000300227 POLR1AO95602 1720 aaPredicted RBP19.03■□□□□ 0.64
CCDC178-201ENST00000300227 CCER2I3L3R5 266 aa19.02■□□□□ 0.64
CCDC178-201ENST00000300227 ADGRB1O14514 1584 aa19.02■□□□□ 0.64
CCDC178-201ENST00000300227 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.01■□□□□ 0.63
CCDC178-201ENST00000300227 CDCA8Q53HL2 280 aa19.01■□□□□ 0.63
CCDC178-201ENST00000300227 SETBP1Q9Y6X0 1596 aa19■□□□□ 0.63
CCDC178-201ENST00000300227 HDGFP51858 240 aaKnown RBP19■□□□□ 0.63
CCDC178-201ENST00000300227 PANK3Q9H999 370 aa19■□□□□ 0.63
CCDC178-201ENST00000300227 FER1L4A9Z1Z3 1794 aa19■□□□□ 0.63
CCDC178-201ENST00000300227 CENPBP07199 599 aaPredicted RBP18.99■□□□□ 0.63
CCDC178-201ENST00000300227 TMEM2Q9UHN6 1383 aa18.98■□□□□ 0.63
CCDC178-201ENST00000300227 C3P01024 1663 aa18.97■□□□□ 0.63
CCDC178-201ENST00000300227 TXNDC2Q86VQ3 553 aa18.97■□□□□ 0.63
CCDC178-201ENST00000300227 CCDC184Q52MB2 194 aa18.96■□□□□ 0.63
CCDC178-201ENST00000300227 LTKP29376 864 aa18.96■□□□□ 0.63
CCDC178-201ENST00000300227 POGKQ9P215 609 aa18.96■□□□□ 0.63
CCDC178-201ENST00000300227 NLRP1Q9C000 1473 aa18.96■□□□□ 0.63
CCDC178-201ENST00000300227 SLC24A1O60721 1099 aa18.95■□□□□ 0.62
CCDC178-201ENST00000300227 PRAM1Q96QH2 718 aa18.94■□□□□ 0.62
CCDC178-201ENST00000300227 ASXL1Q8IXJ9 1541 aa18.94■□□□□ 0.62
CCDC178-201ENST00000300227 ALKQ9UM73 1620 aa18.94■□□□□ 0.62
CCDC178-201ENST00000300227 YTHDC2Q9H6S0 1430 aaKnown RBP18.94■□□□□ 0.62
CCDC178-201ENST00000300227 EID1Q9Y6B2 187 aa18.93■□□□□ 0.62
CCDC178-201ENST00000300227 CC2D1BQ5T0F9 858 aaKnown RBP18.92■□□□□ 0.62
CCDC178-201ENST00000300227 MRS2Q9HD23 443 aa18.92■□□□□ 0.62
CCDC178-201ENST00000300227 PER1O15534 1290 aaPredicted RBP18.92■□□□□ 0.62
CCDC178-201ENST00000300227 THEMISQ8N1K5 641 aaPredicted RBP18.92■□□□□ 0.62
CCDC178-201ENST00000300227 TMC1Q8TDI8 760 aa18.92■□□□□ 0.62
CCDC178-201ENST00000300227 MINK1Q8N4C8 1332 aaPredicted RBP18.92■□□□□ 0.62
CCDC178-201ENST00000300227 RIMS1Q86UR5 1692 aaKnown RBP18.91■□□□□ 0.62
CCDC178-201ENST00000300227 SBNO2Q9Y2G9 1366 aa18.9■□□□□ 0.62
CCDC178-201ENST00000300227 SLC26A8Q96RN1 970 aa18.9■□□□□ 0.62
CCDC178-201ENST00000300227 METP08581 1390 aa18.9■□□□□ 0.62
CCDC178-201ENST00000300227 PTPRMP28827 1452 aa18.9■□□□□ 0.62
CCDC178-201ENST00000300227 WAPLQ7Z5K2 1190 aa18.89■□□□□ 0.62
CCDC178-201ENST00000300227 UBR1Q8IWV7 1749 aa18.89■□□□□ 0.62
CCDC178-201ENST00000300227 CABP2Q9NPB3 220 aa18.88■□□□□ 0.61
CCDC178-201ENST00000300227 KNSTRNQ9Y448 316 aa18.88■□□□□ 0.61
CCDC178-201ENST00000300227 EVC2Q86UK5 1308 aa18.88■□□□□ 0.61
CCDC178-201ENST00000300227 SRPK2P78362 688 aaKnown RBP18.87■□□□□ 0.61
CCDC178-201ENST00000300227 FAM9BQ8IZU0 186 aa18.87■□□□□ 0.61
CCDC178-201ENST00000300227 SLC12A5Q9H2X9 1139 aa18.86■□□□□ 0.61
CCDC178-201ENST00000300227 KTN1Q86UP2 1357 aaKnown RBP18.86■□□□□ 0.61
CCDC178-201ENST00000300227 LRPPRCP42704 1394 aaKnown RBP18.85■□□□□ 0.61
CCDC178-201ENST00000300227 MYO3AQ8NEV4 1616 aa18.85■□□□□ 0.61
CCDC178-201ENST00000300227 QRICH2Q9H0J4 1663 aa18.85■□□□□ 0.61
CCDC178-201ENST00000300227 PLEKHH1Q9ULM0 1364 aa18.84■□□□□ 0.61
CCDC178-201ENST00000300227 RALBP1Q15311 655 aa18.84■□□□□ 0.61
CCDC178-201ENST00000300227 ARHGEF28Q8N1W1 1705 aaKnown RBP18.83■□□□□ 0.61
CCDC178-201ENST00000300227 PLEKHG1Q9ULL1 1385 aa18.83■□□□□ 0.6
CCDC178-201ENST00000300227 ADAMTSL3P82987 1691 aa18.83■□□□□ 0.6
CCDC178-201ENST00000300227 KDM5AP29375 1690 aaKnown RBP18.82■□□□□ 0.6
CCDC178-201ENST00000300227 ABCC11Q96J66 1382 aa18.82■□□□□ 0.6
CCDC178-201ENST00000300227 NRXN3Q9Y4C0 1643 aa18.81■□□□□ 0.6
CCDC178-201ENST00000300227 ADAMTS13Q76LX8 1427 aa18.81■□□□□ 0.6
CCDC178-201ENST00000300227 CARD14Q9BXL6 1004 aa18.8■□□□□ 0.6
CCDC178-201ENST00000300227 MYBBP1AQ9BQG0 1328 aaKnown RBP18.8■□□□□ 0.6
CCDC178-201ENST00000300227 TULP4Q9NRJ4 1543 aa18.8■□□□□ 0.6
CCDC178-201ENST00000300227 CDK19Q9BWU1 502 aa18.79■□□□□ 0.6
CCDC178-201ENST00000300227 ARHGAP23Q9P227 1491 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms