RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 MYOM3Q5VTT5 1437 aa8.56□□□□□ -1.04
GAPVD1-202ENST00000297933 MIA2Q96PC5 1412 aa8.56□□□□□ -1.04
GAPVD1-202ENST00000297933 ERICH6BQ5W0A0 696 aa8.56□□□□□ -1.04
GAPVD1-202ENST00000297933 APPP05067 770 aa8.56□□□□□ -1.04
GAPVD1-202ENST00000297933 NLRP6P59044 892 aa8.56□□□□□ -1.04
GAPVD1-202ENST00000297933 SYAP1Q96A49 352 aaPredicted RBP8.56□□□□□ -1.04
GAPVD1-202ENST00000297933 CHMP4CQ96CF2 233 aa8.55□□□□□ -1.04
GAPVD1-202ENST00000297933 SF3A1Q15459 793 aaKnown RBP8.55□□□□□ -1.04
GAPVD1-202ENST00000297933 GRIN2BQ13224 1484 aa8.55□□□□□ -1.04
GAPVD1-202ENST00000297933 PRG4Q92954 1404 aaPredicted RBP8.55□□□□□ -1.04
GAPVD1-202ENST00000297933 ABTB2Q8N961 1025 aa8.55□□□□□ -1.04
GAPVD1-202ENST00000297933 CNKSR2Q8WXI2 1034 aa8.55□□□□□ -1.04
GAPVD1-202ENST00000297933 PDE3BQ13370 1112 aa8.54□□□□□ -1.04
GAPVD1-202ENST00000297933 SAMD1Q6SPF0 538 aaPredicted RBP8.54□□□□□ -1.04
GAPVD1-202ENST00000297933 POGZQ7Z3K3 1410 aa8.54□□□□□ -1.04
GAPVD1-202ENST00000297933 H3BQV1 296 aa8.54□□□□□ -1.04
GAPVD1-202ENST00000297933 IFFO2Q5TF58 517 aa8.54□□□□□ -1.04
GAPVD1-202ENST00000297933 RIC3Q7Z5B4 369 aa8.54□□□□□ -1.04
GAPVD1-202ENST00000297933 MRC2Q9UBG0 1479 aa8.54□□□□□ -1.04
GAPVD1-202ENST00000297933 MSNP26038 577 aaKnown RBP8.54□□□□□ -1.04
GAPVD1-202ENST00000297933 TSPYL4Q9UJ04 414 aa8.54□□□□□ -1.04
GAPVD1-202ENST00000297933 IFIT2P09913 472 aaKnown RBP8.54□□□□□ -1.04
GAPVD1-202ENST00000297933 G3BP1Q13283 466 aaKnown RBP eCLIP8.53□□□□□ -1.04
GAPVD1-202ENST00000297933 FAM184AQ8NB25 1140 aa8.53□□□□□ -1.04
GAPVD1-202ENST00000297933 TCERG1O14776 1098 aaKnown RBP8.53□□□□□ -1.04
GAPVD1-202ENST00000297933 NAP1L5Q96NT1 182 aaPredicted RBP8.53□□□□□ -1.04
GAPVD1-202ENST00000297933 RBM42Q9BTD8 480 aaKnown RBP8.53□□□□□ -1.04
GAPVD1-202ENST00000297933 DIAPH3Q9NSV4 1193 aa8.53□□□□□ -1.04
GAPVD1-202ENST00000297933 SYNJ2O15056 1496 aa8.53□□□□□ -1.04
GAPVD1-202ENST00000297933 RIPK4P57078 832 aa8.53□□□□□ -1.04
GAPVD1-202ENST00000297933 ST18O60284 1047 aa8.53□□□□□ -1.04
GAPVD1-202ENST00000297933 ANKLE2Q86XL3 938 aa8.53□□□□□ -1.04
GAPVD1-202ENST00000297933 AIMP1Q12904 312 aaKnown RBP8.52□□□□□ -1.04
GAPVD1-202ENST00000297933 FKBP5Q13451 457 aaPredicted RBP8.52□□□□□ -1.04
GAPVD1-202ENST00000297933 ZKSCAN2Q63HK3 967 aa8.52□□□□□ -1.04
GAPVD1-202ENST00000297933 ANKRD45Q5TZF3 282 aa8.52□□□□□ -1.05
GAPVD1-202ENST00000297933 CABP2Q9NPB3 220 aa8.52□□□□□ -1.05
GAPVD1-202ENST00000297933 TPD52L1Q16890 204 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-202ENST00000297933 KIF6Q6ZMV9 814 aa8.52□□□□□ -1.05
GAPVD1-202ENST00000297933 BCL2L13Q9BXK5 485 aa8.52□□□□□ -1.05
GAPVD1-202ENST00000297933 SMG6Q86US8 1419 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-202ENST00000297933 E9PSI1 815 aa8.52□□□□□ -1.05
GAPVD1-202ENST00000297933 CPLX2Q6PUV4 134 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-202ENST00000297933 RUFY2Q8WXA3 655 aa8.52□□□□□ -1.05
GAPVD1-202ENST00000297933 STAC3Q96MF2 364 aa8.52□□□□□ -1.05
GAPVD1-202ENST00000297933 USP47Q96K76 1375 aa8.51□□□□□ -1.05
GAPVD1-202ENST00000297933 TRIM29Q14134 588 aa8.51□□□□□ -1.05
GAPVD1-202ENST00000297933 CUX1P39880 1505 aa8.51□□□□□ -1.05
GAPVD1-202ENST00000297933 ERICH2A1L162 156 aa8.51□□□□□ -1.05
GAPVD1-202ENST00000297933 PES1O00541 588 aaKnown RBP8.51□□□□□ -1.05
GAPVD1-202ENST00000297933 CCDC27Q2M243 656 aa8.51□□□□□ -1.05
GAPVD1-202ENST00000297933 AFAP1Q8N556 730 aa8.51□□□□□ -1.05
GAPVD1-202ENST00000297933 FAM177BA6PVY3 158 aa8.51□□□□□ -1.05
GAPVD1-202ENST00000297933 CCDC43Q96MW1 224 aaKnown RBP8.51□□□□□ -1.05
GAPVD1-202ENST00000297933 IGF1RP08069 1367 aa8.51□□□□□ -1.05
GAPVD1-202ENST00000297933 HMOX1P09601 288 aa8.51□□□□□ -1.05
GAPVD1-202ENST00000297933 TRDNQ13061 729 aa8.51□□□□□ -1.05
GAPVD1-202ENST00000297933 TMEM132EQ6IEE7 984 aa8.5□□□□□ -1.05
GAPVD1-202ENST00000297933 ANO8Q9HCE9 1232 aaPredicted RBP8.5□□□□□ -1.05
GAPVD1-202ENST00000297933 CCAR1Q8IX12 1150 aaKnown RBP8.5□□□□□ -1.05
GAPVD1-202ENST00000297933 IFT140Q96RY7 1462 aa8.5□□□□□ -1.05
GAPVD1-202ENST00000297933 FYB1O15117 783 aa8.5□□□□□ -1.05
GAPVD1-202ENST00000297933 PLEKHO1Q53GL0 409 aaPredicted RBP8.5□□□□□ -1.05
GAPVD1-202ENST00000297933 TOM1L2Q6ZVM7 507 aa8.5□□□□□ -1.05
GAPVD1-202ENST00000297933 FOXD4L1Q9NU39 408 aa8.5□□□□□ -1.05
GAPVD1-202ENST00000297933 ROCK1Q13464 1354 aa8.5□□□□□ -1.05
GAPVD1-202ENST00000297933 TPM2P07951 284 aa8.5□□□□□ -1.05
GAPVD1-202ENST00000297933 TATP17735 454 aaPredicted RBP8.5□□□□□ -1.05
GAPVD1-202ENST00000297933 API5Q9BZZ5 524 aaKnown RBP8.5□□□□□ -1.05
GAPVD1-202ENST00000297933 ZNF644Q9H582 1327 aaPredicted RBP8.5□□□□□ -1.05
GAPVD1-202ENST00000297933 PLIN1O60240 522 aa8.49□□□□□ -1.05
GAPVD1-202ENST00000297933 NFXL1Q6ZNB6 911 aa8.49□□□□□ -1.05
GAPVD1-202ENST00000297933 WWC1Q8IX03 1113 aa8.49□□□□□ -1.05
GAPVD1-202ENST00000297933 SLKQ9H2G2 1235 aaPredicted RBP8.49□□□□□ -1.05
GAPVD1-202ENST00000297933 GGNBP2Q9H3C7 697 aa8.49□□□□□ -1.05
GAPVD1-202ENST00000297933 NCAPD3P42695 1498 aa8.49□□□□□ -1.05
GAPVD1-202ENST00000297933 NEUROD6Q96NK8 337 aa8.49□□□□□ -1.05
GAPVD1-202ENST00000297933 A0A0U1RQG5 324 aaPredicted RBP8.49□□□□□ -1.05
GAPVD1-202ENST00000297933 GNAI1P63096 354 aa8.48□□□□□ -1.05
GAPVD1-202ENST00000297933 RUSC2Q8N2Y8 1516 aa8.48□□□□□ -1.05
GAPVD1-202ENST00000297933 MCTP1Q6DN14 999 aa8.48□□□□□ -1.05
GAPVD1-202ENST00000297933 CCDC47Q96A33 483 aaKnown RBP8.48□□□□□ -1.05
GAPVD1-202ENST00000297933 FYCO1Q9BQS8 1478 aa8.48□□□□□ -1.05
GAPVD1-202ENST00000297933 RRBP1Q9P2E9 1410 aaKnown RBP8.48□□□□□ -1.05
GAPVD1-202ENST00000297933 CPLX1O14810 134 aa8.48□□□□□ -1.05
GAPVD1-202ENST00000297933 TPM3P06753 285 aa8.48□□□□□ -1.05
GAPVD1-202ENST00000297933 HSP90AB4PQ58FF6 505 aa8.48□□□□□ -1.05
GAPVD1-202ENST00000297933 APAF1O14727 1248 aa8.47□□□□□ -1.05
GAPVD1-202ENST00000297933 ZKSCAN1P17029 563 aaPredicted RBP8.47□□□□□ -1.05
GAPVD1-202ENST00000297933 FOXD4L5Q5VV16 416 aaPredicted RBP8.47□□□□□ -1.05
GAPVD1-202ENST00000297933 FOXD4L4Q8WXT5 416 aaPredicted RBP8.47□□□□□ -1.05
GAPVD1-202ENST00000297933 ANO2Q9NQ90 1003 aa8.47□□□□□ -1.05
GAPVD1-202ENST00000297933 DDX54Q8TDD1 881 aaKnown RBP8.47□□□□□ -1.05
GAPVD1-202ENST00000297933 RUNDC1Q96C34 613 aa8.47□□□□□ -1.05
GAPVD1-202ENST00000297933 IKQ13123 557 aaPredicted RBP8.47□□□□□ -1.05
GAPVD1-202ENST00000297933 TSR1Q2NL82 804 aaKnown RBP8.47□□□□□ -1.05
GAPVD1-202ENST00000297933 ANKRD50Q9ULJ7 1429 aa8.47□□□□□ -1.05
GAPVD1-202ENST00000297933 CABP4P57796 275 aa8.46□□□□□ -1.05
GAPVD1-202ENST00000297933 GAS2L2Q8NHY3 880 aa8.46□□□□□ -1.05
GAPVD1-202ENST00000297933 WASHC4Q2M389 1173 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms