RNA–Protein interactions for RNA: ENST00000297596.2

GEM-201, Transcript of GTP binding protein overexpressed in skeletal muscle, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GEM, Length 2,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEM-201ENST00000297596 PPM1GO15355 546 aaPredicted RBP18.06■□□□□ 0.48
GEM-201ENST00000297596 GOLGA2Q08379 1002 aa18.05■□□□□ 0.48
GEM-201ENST00000297596 EFCAB2Q5VUJ9 269 aa18.05■□□□□ 0.48
GEM-201ENST00000297596 CENPQQ7L2Z9 268 aaPredicted RBP18.05■□□□□ 0.48
GEM-201ENST00000297596 SPHKAPQ2M3C7 1700 aa18.05■□□□□ 0.48
GEM-201ENST00000297596 SCAF11Q99590 1463 aaKnown RBP18.05■□□□□ 0.48
GEM-201ENST00000297596 CLASP1Q7Z460 1538 aa18.04■□□□□ 0.48
GEM-201ENST00000297596 ASXL1Q8IXJ9 1541 aa18.04■□□□□ 0.48
GEM-201ENST00000297596 SCAPERQ9BY12 1400 aa18.04■□□□□ 0.48
GEM-201ENST00000297596 STAC3Q96MF2 364 aa18.04■□□□□ 0.48
GEM-201ENST00000297596 PIK3C2GO75747 1445 aa18.04■□□□□ 0.48
GEM-201ENST00000297596 TRPM2O94759 1503 aa18.03■□□□□ 0.48
GEM-201ENST00000297596 CEP152O94986 1710 aa18.03■□□□□ 0.48
GEM-201ENST00000297596 ABCC1P33527 1531 aa18.03■□□□□ 0.48
GEM-201ENST00000297596 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.02■□□□□ 0.48
GEM-201ENST00000297596 TRAPPC8Q9Y2L5 1435 aa18.02■□□□□ 0.48
GEM-201ENST00000297596 NPC1L1Q9UHC9 1359 aa18.02■□□□□ 0.48
GEM-201ENST00000297596 SLFN5Q08AF3 891 aa18.02■□□□□ 0.47
GEM-201ENST00000297596 ERCC6L2Q5T890 1561 aa18.01■□□□□ 0.47
GEM-201ENST00000297596 PTPRTO14522 1441 aa18.01■□□□□ 0.47
GEM-201ENST00000297596 MYOM1P52179 1685 aa18■□□□□ 0.47
GEM-201ENST00000297596 TRMT2AQ8IZ69 625 aaKnown RBP18■□□□□ 0.47
GEM-201ENST00000297596 CLTCL1P53675 1640 aa17.99■□□□□ 0.47
GEM-201ENST00000297596 SPAG9O60271 1321 aaKnown RBP17.97■□□□□ 0.47
GEM-201ENST00000297596 FAM161AQ3B820 660 aa17.97■□□□□ 0.47
GEM-201ENST00000297596 ZCCHC11Q5TAX3 1644 aaKnown RBP17.97■□□□□ 0.47
GEM-201ENST00000297596 RTEL1-TNFRSF6BF6WH68 1400 aa17.97■□□□□ 0.47
GEM-201ENST00000297596 EIF3AQ14152 1382 aaKnown RBP17.97■□□□□ 0.47
GEM-201ENST00000297596 KIAA1210Q9ULL0 1709 aa17.95■□□□□ 0.46
GEM-201ENST00000297596 KDM5AP29375 1690 aaKnown RBP17.95■□□□□ 0.46
GEM-201ENST00000297596 CCDC146Q8IYE0 955 aa17.95■□□□□ 0.46
GEM-201ENST00000297596 C8orf34Q49A92 452 aa17.95■□□□□ 0.46
GEM-201ENST00000297596 DEPDC5O75140 1603 aa17.94■□□□□ 0.46
GEM-201ENST00000297596 TET3O43151 1660 aa17.94■□□□□ 0.46
GEM-201ENST00000297596 ZFYVE16Q7Z3T8 1539 aa17.93■□□□□ 0.46
GEM-201ENST00000297596 NKTRP30414 1462 aaKnown RBP17.93■□□□□ 0.46
GEM-201ENST00000297596 APAF1O14727 1248 aa17.93■□□□□ 0.46
GEM-201ENST00000297596 AFAP1Q8N556 730 aa17.93■□□□□ 0.46
GEM-201ENST00000297596 SPINK5Q9NQ38 1064 aaPredicted RBP17.93■□□□□ 0.46
GEM-201ENST00000297596 UHRF1BP1LA0JNW5 1464 aa17.91■□□□□ 0.46
GEM-201ENST00000297596 E9PSI1 815 aa17.9■□□□□ 0.46
GEM-201ENST00000297596 SLC24A1O60721 1099 aa17.9■□□□□ 0.46
GEM-201ENST00000297596 SLC4A3P48751 1232 aa17.9■□□□□ 0.46
GEM-201ENST00000297596 NEURL4Q96JN8 1562 aa17.9■□□□□ 0.46
GEM-201ENST00000297596 DAXXQ9UER7 740 aaPredicted RBP17.9■□□□□ 0.46
GEM-201ENST00000297596 BCAR3O75815 825 aa17.89■□□□□ 0.45
GEM-201ENST00000297596 ARAP3Q8WWN8 1544 aa17.89■□□□□ 0.45
GEM-201ENST00000297596 VWDEQ8N2E2 1590 aa17.89■□□□□ 0.45
GEM-201ENST00000297596 ERVK-7P63135 1459 aa17.89■□□□□ 0.45
GEM-201ENST00000297596 KANK1Q14678 1352 aa17.89■□□□□ 0.45
GEM-201ENST00000297596 NFKBIBQ15653 356 aa17.88■□□□□ 0.45
GEM-201ENST00000297596 NGEFQ8N5V2 710 aa17.88■□□□□ 0.45
GEM-201ENST00000297596 RGS3P49796 1198 aa17.88■□□□□ 0.45
GEM-201ENST00000297596 CFAP70Q5T0N1 1121 aa17.87■□□□□ 0.45
GEM-201ENST00000297596 CARD14Q9BXL6 1004 aa17.87■□□□□ 0.45
GEM-201ENST00000297596 MAP3K4Q9Y6R4 1608 aa17.87■□□□□ 0.45
GEM-201ENST00000297596 IL27Q8NEV9 243 aa17.86■□□□□ 0.45
GEM-201ENST00000297596 MYOM2P54296 1465 aa17.85■□□□□ 0.45
GEM-201ENST00000297596 DMRT2Q9Y5R5 561 aa17.85■□□□□ 0.45
GEM-201ENST00000297596 ABCA6Q8N139 1617 aa17.85■□□□□ 0.45
GEM-201ENST00000297596 ADGRF5Q8IZF2 1346 aa17.84■□□□□ 0.45
GEM-201ENST00000297596 ATP7AQ04656 1500 aa17.84■□□□□ 0.45
GEM-201ENST00000297596 GSE1Q14687 1217 aa17.83■□□□□ 0.45
GEM-201ENST00000297596 KIF3BO15066 747 aa17.83■□□□□ 0.44
GEM-201ENST00000297596 PDE3AQ14432 1141 aa17.83■□□□□ 0.44
GEM-201ENST00000297596 INO80Q9ULG1 1556 aaPredicted RBP17.83■□□□□ 0.44
GEM-201ENST00000297596 CGNL1Q0VF96 1302 aa17.82■□□□□ 0.44
GEM-201ENST00000297596 IGHDP01880 384 aa17.82■□□□□ 0.44
GEM-201ENST00000297596 POLR3AO14802 1390 aaPredicted RBP17.82■□□□□ 0.44
GEM-201ENST00000297596 KIF1BO60333 1816 aa17.82■□□□□ 0.44
GEM-201ENST00000297596 UGGT1Q9NYU2 1555 aa17.81■□□□□ 0.44
GEM-201ENST00000297596 NINLQ9Y2I6 1382 aa17.81■□□□□ 0.44
GEM-201ENST00000297596 VIRMAQ69YN4 1812 aaKnown RBP17.8■□□□□ 0.44
GEM-201ENST00000297596 IFT172Q9UG01 1749 aa17.8■□□□□ 0.44
GEM-201ENST00000297596 CENPJQ9HC77 1338 aaPredicted RBP17.8■□□□□ 0.44
GEM-201ENST00000297596 WWC1Q8IX03 1113 aa17.8■□□□□ 0.44
GEM-201ENST00000297596 MYO3AQ8NEV4 1616 aa17.8■□□□□ 0.44
GEM-201ENST00000297596 MROH1Q8NDA8 1641 aa17.79■□□□□ 0.44
GEM-201ENST00000297596 SBNO2Q9Y2G9 1366 aa17.79■□□□□ 0.44
GEM-201ENST00000297596 CLUAP1Q96AJ1 413 aa17.78■□□□□ 0.44
GEM-201ENST00000297596 ABCA9Q8IUA7 1624 aa17.77■□□□□ 0.44
GEM-201ENST00000297596 FANCAO15360 1455 aa17.77■□□□□ 0.44
GEM-201ENST00000297596 NRXN1Q9ULB1 1477 aa17.77■□□□□ 0.44
GEM-201ENST00000297596 PANK1Q8TE04 598 aa17.76■□□□□ 0.43
GEM-201ENST00000297596 MROH2AA6NES4 1674 aa17.75■□□□□ 0.43
GEM-201ENST00000297596 SHPRHQ149N8 1683 aa17.75■□□□□ 0.43
GEM-201ENST00000297596 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
GEM-201ENST00000297596 COG6Q9Y2V7 657 aa17.75■□□□□ 0.43
GEM-201ENST00000297596 EFCAB6Q5THR3 1501 aa17.75■□□□□ 0.43
GEM-201ENST00000297596 USP19O94966 1318 aa17.75■□□□□ 0.43
GEM-201ENST00000297596 MAPK8IP3Q9UPT6 1336 aa17.75■□□□□ 0.43
GEM-201ENST00000297596 FRAT1Q92837 279 aaPredicted RBP17.75■□□□□ 0.43
GEM-201ENST00000297596 MORC1Q86VD1 984 aa17.74■□□□□ 0.43
GEM-201ENST00000297596 FRAT2O75474 233 aaPredicted RBP17.73■□□□□ 0.43
GEM-201ENST00000297596 RUNDC1Q96C34 613 aa17.73■□□□□ 0.43
GEM-201ENST00000297596 NSD3Q9BZ95 1437 aa17.73■□□□□ 0.43
GEM-201ENST00000297596 RTN4Q9NQC3 1192 aaKnown RBP17.73■□□□□ 0.43
GEM-201ENST00000297596 SETBP1Q9Y6X0 1596 aa17.73■□□□□ 0.43
GEM-201ENST00000297596 ADGRL1O94910 1474 aa17.72■□□□□ 0.43
GEM-201ENST00000297596 PPRC1Q5VV67 1664 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms