RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 IQGAP1P46940 1657 aa25.78■■□□□ 1.72
NKX6-1-201ENST00000295886 PTPRTO14522 1441 aa25.75■■□□□ 1.71
NKX6-1-201ENST00000295886 INSRP06213 1382 aa25.75■■□□□ 1.71
NKX6-1-201ENST00000295886 SPHKAPQ2M3C7 1700 aa25.75■■□□□ 1.71
NKX6-1-201ENST00000295886 DUSP27Q5VZP5 1158 aa25.75■■□□□ 1.71
NKX6-1-201ENST00000295886 UGGT1Q9NYU2 1555 aa25.75■■□□□ 1.71
NKX6-1-201ENST00000295886 UHRF1BP1LA0JNW5 1464 aa25.75■■□□□ 1.71
NKX6-1-201ENST00000295886 CDCA8Q53HL2 280 aa25.74■■□□□ 1.71
NKX6-1-201ENST00000295886 BACH2Q9BYV9 841 aa25.74■■□□□ 1.71
NKX6-1-201ENST00000295886 SCAPERQ9BY12 1400 aa25.74■■□□□ 1.71
NKX6-1-201ENST00000295886 RTEL1-TNFRSF6BF6WH68 1400 aa25.73■■□□□ 1.71
NKX6-1-201ENST00000295886 ADGRF5Q8IZF2 1346 aa25.72■■□□□ 1.71
NKX6-1-201ENST00000295886 CLASP1Q7Z460 1538 aa25.72■■□□□ 1.71
NKX6-1-201ENST00000295886 CEP152O94986 1710 aa25.72■■□□□ 1.71
NKX6-1-201ENST00000295886 KANK1Q14678 1352 aa25.71■■□□□ 1.71
NKX6-1-201ENST00000295886 ASXL1Q8IXJ9 1541 aa25.7■■□□□ 1.7
NKX6-1-201ENST00000295886 FANCAO15360 1455 aa25.7■■□□□ 1.7
NKX6-1-201ENST00000295886 GOLGA2Q08379 1002 aa25.69■■□□□ 1.7
NKX6-1-201ENST00000295886 SYNMO15061 1565 aa25.69■■□□□ 1.7
NKX6-1-201ENST00000295886 SPINK5Q9NQ38 1064 aaPredicted RBP25.68■■□□□ 1.7
NKX6-1-201ENST00000295886 ATP7AQ04656 1500 aa25.68■■□□□ 1.7
NKX6-1-201ENST00000295886 ZNF521Q96K83 1311 aa25.67■■□□□ 1.7
NKX6-1-201ENST00000295886 APAF1O14727 1248 aa25.67■■□□□ 1.7
NKX6-1-201ENST00000295886 MS4A1P11836 297 aa25.66■■□□□ 1.7
NKX6-1-201ENST00000295886 EIF3AQ14152 1382 aaKnown RBP25.66■■□□□ 1.7
NKX6-1-201ENST00000295886 MYOM1P52179 1685 aa25.66■■□□□ 1.7
NKX6-1-201ENST00000295886 TET3O43151 1660 aa25.65■■□□□ 1.7
NKX6-1-201ENST00000295886 CARD14Q9BXL6 1004 aa25.65■■□□□ 1.7
NKX6-1-201ENST00000295886 DEPDC5O75140 1603 aa25.65■■□□□ 1.7
NKX6-1-201ENST00000295886 CHGAP10645 457 aaKnown RBP25.65■■□□□ 1.7
NKX6-1-201ENST00000295886 LAS1LQ9Y4W2 734 aaKnown RBP25.64■■□□□ 1.7
NKX6-1-201ENST00000295886 ADGRL1O94910 1474 aa25.63■■□□□ 1.69
NKX6-1-201ENST00000295886 STAC3Q96MF2 364 aa25.62■■□□□ 1.69
NKX6-1-201ENST00000295886 SLFN5Q08AF3 891 aa25.62■■□□□ 1.69
NKX6-1-201ENST00000295886 PIK3C2GO75747 1445 aa25.61■■□□□ 1.69
NKX6-1-201ENST00000295886 DMRT2Q9Y5R5 561 aa25.61■■□□□ 1.69
NKX6-1-201ENST00000295886 ERVK-7P63135 1459 aa25.6■■□□□ 1.69
NKX6-1-201ENST00000295886 INO80Q9ULG1 1556 aaPredicted RBP25.6■■□□□ 1.69
NKX6-1-201ENST00000295886 RTL5Q5HYW3 569 aaPredicted RBP25.59■■□□□ 1.69
NKX6-1-201ENST00000295886 KDM2BQ8NHM5 1336 aa25.58■■□□□ 1.69
NKX6-1-201ENST00000295886 ARAP3Q8WWN8 1544 aa25.58■■□□□ 1.69
NKX6-1-201ENST00000295886 TNNT2P45379 298 aaPredicted RBP25.58■■□□□ 1.69
NKX6-1-201ENST00000295886 VWDEQ8N2E2 1590 aa25.57■■□□□ 1.68
NKX6-1-201ENST00000295886 BCAR3O75815 825 aa25.57■■□□□ 1.68
NKX6-1-201ENST00000295886 KDM5AP29375 1690 aaKnown RBP25.57■■□□□ 1.68
NKX6-1-201ENST00000295886 ABCA6Q8N139 1617 aa25.57■■□□□ 1.68
NKX6-1-201ENST00000295886 TRAK1Q9UPV9 953 aa25.55■■□□□ 1.68
NKX6-1-201ENST00000295886 ABCA9Q8IUA7 1624 aa25.55■■□□□ 1.68
NKX6-1-201ENST00000295886 MROH1Q8NDA8 1641 aa25.55■■□□□ 1.68
NKX6-1-201ENST00000295886 MAP3K4Q9Y6R4 1608 aa25.55■■□□□ 1.68
NKX6-1-201ENST00000295886 NPC1L1Q9UHC9 1359 aa25.54■■□□□ 1.68
NKX6-1-201ENST00000295886 CENPQQ7L2Z9 268 aaPredicted RBP25.51■■□□□ 1.68
NKX6-1-201ENST00000295886 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.51■■□□□ 1.68
NKX6-1-201ENST00000295886 NOS1P29475 1434 aa25.51■■□□□ 1.67
NKX6-1-201ENST00000295886 RGS3P49796 1198 aa25.51■■□□□ 1.67
NKX6-1-201ENST00000295886 TMEM132EQ6IEE7 984 aa25.51■■□□□ 1.67
NKX6-1-201ENST00000295886 TRMT2AQ8IZ69 625 aaKnown RBP25.51■■□□□ 1.67
NKX6-1-201ENST00000295886 NEUROD2Q15784 382 aa25.5■■□□□ 1.67
NKX6-1-201ENST00000295886 GGT6Q6P531 493 aa25.5■■□□□ 1.67
NKX6-1-201ENST00000295886 ASXL2Q76L83 1435 aa25.49■■□□□ 1.67
NKX6-1-201ENST00000295886 MROH2AA6NES4 1674 aa25.49■■□□□ 1.67
NKX6-1-201ENST00000295886 SLC4A3P48751 1232 aa25.49■■□□□ 1.67
NKX6-1-201ENST00000295886 SLC12A5Q9H2X9 1139 aa25.49■■□□□ 1.67
NKX6-1-201ENST00000295886 SENP3Q9H4L4 574 aaPredicted RBP25.49■■□□□ 1.67
NKX6-1-201ENST00000295886 MYOM2P54296 1465 aa25.49■■□□□ 1.67
NKX6-1-201ENST00000295886 KIAA1210Q9ULL0 1709 aa25.48■■□□□ 1.67
NKX6-1-201ENST00000295886 NUTM2DQ5VT03 806 aaPredicted RBP25.48■■□□□ 1.67
NKX6-1-201ENST00000295886 CFAP65Q6ZU64 1925 aaKnown RBP25.48■■□□□ 1.67
NKX6-1-201ENST00000295886 CENPJQ9HC77 1338 aaPredicted RBP25.47■■□□□ 1.67
NKX6-1-201ENST00000295886 RRP7AQ9Y3A4 280 aaKnown RBP25.47■■□□□ 1.67
NKX6-1-201ENST00000295886 EFCAB6Q5THR3 1501 aa25.47■■□□□ 1.67
NKX6-1-201ENST00000295886 PPRC1Q5VV67 1664 aaKnown RBP25.47■■□□□ 1.67
NKX6-1-201ENST00000295886 NKTRP30414 1462 aaKnown RBP25.46■■□□□ 1.67
NKX6-1-201ENST00000295886 NEFMP07197 916 aa25.46■■□□□ 1.67
NKX6-1-201ENST00000295886 KIF1BO60333 1816 aa25.46■■□□□ 1.67
NKX6-1-201ENST00000295886 E9PSI1 815 aa25.44■■□□□ 1.66
NKX6-1-201ENST00000295886 MORC1Q86VD1 984 aa25.43■■□□□ 1.66
NKX6-1-201ENST00000295886 NSD3Q9BZ95 1437 aa25.43■■□□□ 1.66
NKX6-1-201ENST00000295886 KIDINS220Q9ULH0 1771 aa25.43■■□□□ 1.66
NKX6-1-201ENST00000295886 C8orf34Q49A92 452 aa25.41■■□□□ 1.66
NKX6-1-201ENST00000295886 WWC1Q8IX03 1113 aa25.41■■□□□ 1.66
NKX6-1-201ENST00000295886 SLC24A1O60721 1099 aa25.39■■□□□ 1.66
NKX6-1-201ENST00000295886 PANK1Q8TE04 598 aa25.39■■□□□ 1.65
NKX6-1-201ENST00000295886 IFT172Q9UG01 1749 aa25.39■■□□□ 1.65
NKX6-1-201ENST00000295886 IGHDP01880 384 aa25.38■■□□□ 1.65
NKX6-1-201ENST00000295886 FAM161AQ3B820 660 aa25.38■■□□□ 1.65
NKX6-1-201ENST00000295886 NEURL4Q96JN8 1562 aa25.38■■□□□ 1.65
NKX6-1-201ENST00000295886 NPATQ14207 1427 aa25.38■■□□□ 1.65
NKX6-1-201ENST00000295886 NRXN1Q9ULB1 1477 aa25.37■■□□□ 1.65
NKX6-1-201ENST00000295886 CANXP27824 592 aaKnown RBP25.37■■□□□ 1.65
NKX6-1-201ENST00000295886 FRAT1Q92837 279 aaPredicted RBP25.36■■□□□ 1.65
NKX6-1-201ENST00000295886 COG6Q9Y2V7 657 aa25.36■■□□□ 1.65
NKX6-1-201ENST00000295886 DDRGK1Q96HY6 314 aa25.35■■□□□ 1.65
NKX6-1-201ENST00000295886 C14orf93Q9H972 538 aaKnown RBP25.35■■□□□ 1.65
NKX6-1-201ENST00000295886 POLR3AO14802 1390 aaPredicted RBP25.35■■□□□ 1.65
NKX6-1-201ENST00000295886 ZNF518AQ6AHZ1 1483 aa25.35■■□□□ 1.65
NKX6-1-201ENST00000295886 SAFB2Q14151 953 aaKnown RBP eCLIP25.34■■□□□ 1.65
NKX6-1-201ENST00000295886 ADGRB3O60242 1522 aa25.34■■□□□ 1.65
NKX6-1-201ENST00000295886 SBNO2Q9Y2G9 1366 aa25.33■■□□□ 1.65
NKX6-1-201ENST00000295886 MTHFSP49914 203 aa25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms