RNA–Protein interactions for RNA: ENST00000291892.10

RDH13-201, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 3,022 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-201ENST00000291892 ZSCAN30Q86W11 494 aa17.15■□□□□ 0.34
RDH13-201ENST00000291892 TNPO1Q92973 898 aaKnown RBP17.15■□□□□ 0.34
RDH13-201ENST00000291892 TCOF1Q13428 1488 aaKnown RBP17.14■□□□□ 0.33
RDH13-201ENST00000291892 PZPP20742 1482 aa17.14■□□□□ 0.33
RDH13-201ENST00000291892 EIF3AQ14152 1382 aaKnown RBP17.14■□□□□ 0.33
RDH13-201ENST00000291892 OFD1O75665 1012 aa17.14■□□□□ 0.33
RDH13-201ENST00000291892 NCLP19338 710 aaKnown RBP17.14■□□□□ 0.33
RDH13-201ENST00000291892 KIF14Q15058 1648 aa17.14■□□□□ 0.33
RDH13-201ENST00000291892 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.13■□□□□ 0.33
RDH13-201ENST00000291892 PCDHB15Q9Y5E8 787 aa17.13■□□□□ 0.33
RDH13-201ENST00000291892 KIAA1107Q9UPP5 1409 aa17.13■□□□□ 0.33
RDH13-201ENST00000291892 ABCC5O15440 1437 aa17.12■□□□□ 0.33
RDH13-201ENST00000291892 PDE4CQ08493 712 aa17.11■□□□□ 0.33
RDH13-201ENST00000291892 RALGAPBQ86X10 1494 aa17.11■□□□□ 0.33
RDH13-201ENST00000291892 HSP90AB1P08238 724 aaKnown RBP17.11■□□□□ 0.33
RDH13-201ENST00000291892 CGNL1Q0VF96 1302 aa17.11■□□□□ 0.33
RDH13-201ENST00000291892 AMER1Q5JTC6 1135 aaPredicted RBP17.1■□□□□ 0.33
RDH13-201ENST00000291892 DISP3Q9P2K9 1392 aa17.1■□□□□ 0.33
RDH13-201ENST00000291892 SAMD9Q5K651 1589 aa17.1■□□□□ 0.33
RDH13-201ENST00000291892 PPP2R1AP30153 589 aa17.1■□□□□ 0.33
RDH13-201ENST00000291892 CCDC173Q0VFZ6 552 aa17.1■□□□□ 0.33
RDH13-201ENST00000291892 EPRSP07814 1512 aaKnown RBP17.09■□□□□ 0.33
RDH13-201ENST00000291892 JARID2Q92833 1246 aaPredicted RBP17.09■□□□□ 0.33
RDH13-201ENST00000291892 KNSTRNQ9Y448 316 aa17.08■□□□□ 0.32
RDH13-201ENST00000291892 PBRM1Q86U86 1689 aa17.08■□□□□ 0.32
RDH13-201ENST00000291892 BBXQ8WY36 941 aaPredicted RBP17.07■□□□□ 0.32
RDH13-201ENST00000291892 ARHGEF11O15085 1522 aa17.07■□□□□ 0.32
RDH13-201ENST00000291892 PLEKHH2Q8IVE3 1493 aa17.07■□□□□ 0.32
RDH13-201ENST00000291892 NUP155O75694 1391 aa17.07■□□□□ 0.32
RDH13-201ENST00000291892 RLBP1P12271 317 aa17.07■□□□□ 0.32
RDH13-201ENST00000291892 GBP4Q96PP9 640 aa17.07■□□□□ 0.32
RDH13-201ENST00000291892 ZNF521Q96K83 1311 aa17.07■□□□□ 0.32
RDH13-201ENST00000291892 DDX49Q9Y6V7 483 aaKnown RBP17.07■□□□□ 0.32
RDH13-201ENST00000291892 RRP7AQ9Y3A4 280 aaKnown RBP17.06■□□□□ 0.32
RDH13-201ENST00000291892 TSC1Q92574 1164 aa17.06■□□□□ 0.32
RDH13-201ENST00000291892 ZNF692Q9BU19 519 aaPredicted RBP17.05■□□□□ 0.32
RDH13-201ENST00000291892 CFDP1Q9UEE9 299 aaPredicted RBP17.05■□□□□ 0.32
RDH13-201ENST00000291892 VIRMAQ69YN4 1812 aaKnown RBP17.05■□□□□ 0.32
RDH13-201ENST00000291892 MPNDQ8N594 471 aa17.05■□□□□ 0.32
RDH13-201ENST00000291892 PMFBP1Q8TBY8 1022 aa17.04■□□□□ 0.32
RDH13-201ENST00000291892 ISY1Q9ULR0 285 aaKnown RBP17.04■□□□□ 0.32
RDH13-201ENST00000291892 NKTRP30414 1462 aaKnown RBP17.04■□□□□ 0.32
RDH13-201ENST00000291892 ADAMTS12P58397 1594 aa17.04■□□□□ 0.32
RDH13-201ENST00000291892 CAMSAP2Q08AD1 1489 aa17.03■□□□□ 0.32
RDH13-201ENST00000291892 IFT140Q96RY7 1462 aa17.03■□□□□ 0.32
RDH13-201ENST00000291892 ROCK1Q13464 1354 aa17.03■□□□□ 0.32
RDH13-201ENST00000291892 SMAP1Q8IYB5 467 aaPredicted RBP17.03■□□□□ 0.32
RDH13-201ENST00000291892 MAP7D2Q96T17 732 aa17.03■□□□□ 0.32
RDH13-201ENST00000291892 SSFA2P28290 1259 aa17.03■□□□□ 0.32
RDH13-201ENST00000291892 IQGAP2Q13576 1575 aa17.03■□□□□ 0.32
RDH13-201ENST00000291892 PDE3AQ14432 1141 aa17.02■□□□□ 0.32
RDH13-201ENST00000291892 BCL11BQ9C0K0 894 aaPredicted RBP17.02■□□□□ 0.32
RDH13-201ENST00000291892 KIAA0586Q9BVV6 1533 aa17.02■□□□□ 0.31
RDH13-201ENST00000291892 FAM177BA6PVY3 158 aa17.02■□□□□ 0.31
RDH13-201ENST00000291892 CBX1P83916 185 aa17.02■□□□□ 0.31
RDH13-201ENST00000291892 E9PSI1 815 aa17.01■□□□□ 0.31
RDH13-201ENST00000291892 CAVIN1Q6NZI2 390 aaKnown RBP17.01■□□□□ 0.31
RDH13-201ENST00000291892 EIF4G3O43432 1585 aaKnown RBP17.01■□□□□ 0.31
RDH13-201ENST00000291892 E9PCH4 1651 aa17■□□□□ 0.31
RDH13-201ENST00000291892 SLC24A1O60721 1099 aa17■□□□□ 0.31
RDH13-201ENST00000291892 IGSF3O75054 1194 aa17■□□□□ 0.31
RDH13-201ENST00000291892 TMF1P82094 1093 aa17■□□□□ 0.31
RDH13-201ENST00000291892 DNTTIP2Q5QJE6 756 aaKnown RBP17■□□□□ 0.31
RDH13-201ENST00000291892 PPP1R9BQ96SB3 815 aa17■□□□□ 0.31
RDH13-201ENST00000291892 RWDD1Q9H446 243 aaPredicted RBP16.99■□□□□ 0.31
RDH13-201ENST00000291892 WDR62O43379 1518 aa16.99■□□□□ 0.31
RDH13-201ENST00000291892 UHRF1BP1Q6BDS2 1440 aa16.99■□□□□ 0.31
RDH13-201ENST00000291892 TESK2Q96S53 571 aa16.98■□□□□ 0.31
RDH13-201ENST00000291892 CD2BP2O95400 341 aaKnown RBP16.98■□□□□ 0.31
RDH13-201ENST00000291892 SKOR2Q2VWA4 1001 aaPredicted RBP16.98■□□□□ 0.31
RDH13-201ENST00000291892 RBM42Q9BTD8 480 aaKnown RBP16.98■□□□□ 0.31
RDH13-201ENST00000291892 JPH4Q96JJ6 628 aa16.97■□□□□ 0.31
RDH13-201ENST00000291892 GOLGA6L22H0YM25 854 aa16.96■□□□□ 0.31
RDH13-201ENST00000291892 TRMT2AQ8IZ69 625 aaKnown RBP16.96■□□□□ 0.31
RDH13-201ENST00000291892 CHMP4BQ9H444 224 aaKnown RBP16.96■□□□□ 0.31
RDH13-201ENST00000291892 MCTP1Q6DN14 999 aa16.96■□□□□ 0.31
RDH13-201ENST00000291892 GRIN2AQ12879 1464 aa16.96■□□□□ 0.31
RDH13-201ENST00000291892 TNNT2P45379 298 aaPredicted RBP16.96■□□□□ 0.3
RDH13-201ENST00000291892 RAB3GAP1Q15042 981 aa16.96■□□□□ 0.3
RDH13-201ENST00000291892 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
RDH13-201ENST00000291892 RNF214Q8ND24 703 aa16.95■□□□□ 0.3
RDH13-201ENST00000291892 PLB1Q6P1J6 1458 aa16.95■□□□□ 0.3
RDH13-201ENST00000291892 RBSNQ9H1K0 784 aa16.95■□□□□ 0.3
RDH13-201ENST00000291892 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.95■□□□□ 0.3
RDH13-201ENST00000291892 VGLL3A8MV65 326 aa16.94■□□□□ 0.3
RDH13-201ENST00000291892 RTEL1-TNFRSF6BF6WH68 1400 aa16.94■□□□□ 0.3
RDH13-201ENST00000291892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.3
RDH13-201ENST00000291892 RBM27Q9P2N5 1060 aaKnown RBP16.94■□□□□ 0.3
RDH13-201ENST00000291892 DMTNQ08495 405 aa16.93■□□□□ 0.3
RDH13-201ENST00000291892 FTSJ3Q8IY81 847 aaKnown RBP16.93■□□□□ 0.3
RDH13-201ENST00000291892 PRG4Q92954 1404 aaPredicted RBP16.93■□□□□ 0.3
RDH13-201ENST00000291892 PTMAP06454 111 aaKnown RBP16.93■□□□□ 0.3
RDH13-201ENST00000291892 ZSCAN20P17040 1043 aaPredicted RBP16.93■□□□□ 0.3
RDH13-201ENST00000291892 DISP1Q96F81 1524 aa16.93■□□□□ 0.3
RDH13-201ENST00000291892 DYNC1I1O14576 645 aa16.92■□□□□ 0.3
RDH13-201ENST00000291892 GTF2E1P29083 439 aaPredicted RBP16.92■□□□□ 0.3
RDH13-201ENST00000291892 RARSP54136 660 aaKnown RBP16.92■□□□□ 0.3
RDH13-201ENST00000291892 NOL7Q9UMY1 257 aaKnown RBP16.92■□□□□ 0.3
RDH13-201ENST00000291892 CHAMP1Q96JM3 812 aa16.92■□□□□ 0.3
RDH13-201ENST00000291892 ERBINQ96RT1 1412 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms