RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 CCAR2Q8N163 923 aaKnown RBP13.31□□□□□ -0.28
PKNOX1-201ENST00000291547 SMC4Q9NTJ3 1288 aa13.3□□□□□ -0.28
PKNOX1-201ENST00000291547 ST18O60284 1047 aa13.3□□□□□ -0.28
PKNOX1-201ENST00000291547 ZMYND15Q9H091 742 aa13.3□□□□□ -0.28
PKNOX1-201ENST00000291547 CEP89Q96ST8 783 aa13.3□□□□□ -0.28
PKNOX1-201ENST00000291547 KIF15Q9NS87 1388 aa13.29□□□□□ -0.28
PKNOX1-201ENST00000291547 SLC4A3P48751 1232 aa13.29□□□□□ -0.28
PKNOX1-201ENST00000291547 RALBP1Q15311 655 aa13.29□□□□□ -0.28
PKNOX1-201ENST00000291547 SF3A1Q15459 793 aaKnown RBP13.29□□□□□ -0.28
PKNOX1-201ENST00000291547 RAPGEF6Q8TEU7 1601 aa13.29□□□□□ -0.28
PKNOX1-201ENST00000291547 HMMRO75330 724 aa13.29□□□□□ -0.28
PKNOX1-201ENST00000291547 GORABQ5T7V8 394 aa13.29□□□□□ -0.28
PKNOX1-201ENST00000291547 TPM2P07951 284 aa13.28□□□□□ -0.28
PKNOX1-201ENST00000291547 KIF16BQ96L93 1317 aa13.27□□□□□ -0.28
PKNOX1-201ENST00000291547 PLEKHH2Q8IVE3 1493 aa13.27□□□□□ -0.28
PKNOX1-201ENST00000291547 GPATCH3Q96I76 525 aa13.27□□□□□ -0.29
PKNOX1-201ENST00000291547 STK31Q9BXU1 1019 aa13.27□□□□□ -0.29
PKNOX1-201ENST00000291547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.27□□□□□ -0.291e-6■■■□□ 18.4
PKNOX1-201ENST00000291547 GPS2Q13227 327 aa13.27□□□□□ -0.29
PKNOX1-201ENST00000291547 ZNF330Q9Y3S2 320 aaPredicted RBP13.27□□□□□ -0.29
PKNOX1-201ENST00000291547 WASHC2CQ9Y4E1 1318 aa13.27□□□□□ -0.29
PKNOX1-201ENST00000291547 FAM13BQ9NYF5 915 aa13.26□□□□□ -0.29
PKNOX1-201ENST00000291547 ARHGEF11O15085 1522 aa13.26□□□□□ -0.29
PKNOX1-201ENST00000291547 KIF14Q15058 1648 aa13.26□□□□□ -0.29
PKNOX1-201ENST00000291547 GOLGA6L19H0YKK7 550 aa13.25□□□□□ -0.29
PKNOX1-201ENST00000291547 PES1O00541 588 aaKnown RBP13.25□□□□□ -0.29
PKNOX1-201ENST00000291547 AFAP1Q8N556 730 aa13.25□□□□□ -0.29
PKNOX1-201ENST00000291547 KIF3AQ9Y496 699 aa13.25□□□□□ -0.29
PKNOX1-201ENST00000291547 BECN2A8MW95 431 aa13.25□□□□□ -0.29
PKNOX1-201ENST00000291547 HDGFL2Q7Z4V5 671 aaPredicted RBP13.25□□□□□ -0.29
PKNOX1-201ENST00000291547 MTERF4Q7Z6M4 381 aaKnown RBP13.25□□□□□ -0.29
PKNOX1-201ENST00000291547 ANKRD50Q9ULJ7 1429 aa13.25□□□□□ -0.29
PKNOX1-201ENST00000291547 PATL2C9JE40 543 aaKnown RBP13.25□□□□□ -0.29
PKNOX1-201ENST00000291547 C11orf95C9JLR9 678 aaPredicted RBP13.25□□□□□ -0.29
PKNOX1-201ENST00000291547 PDE4AP27815 886 aa13.25□□□□□ -0.29
PKNOX1-201ENST00000291547 SKOR2Q2VWA4 1001 aaPredicted RBP13.25□□□□□ -0.29
PKNOX1-201ENST00000291547 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
PKNOX1-201ENST00000291547 NUP153P49790 1475 aaKnown RBP13.24□□□□□ -0.29
PKNOX1-201ENST00000291547 ZNF592Q92610 1267 aa13.24□□□□□ -0.29
PKNOX1-201ENST00000291547 DISP1Q96F81 1524 aa13.24□□□□□ -0.29
PKNOX1-201ENST00000291547 CENPJQ9HC77 1338 aaPredicted RBP13.24□□□□□ -0.29
PKNOX1-201ENST00000291547 FOXD4L6Q3SYB3 417 aaPredicted RBP13.23□□□□□ -0.29
PKNOX1-201ENST00000291547 FOXD4L3Q6VB84 417 aaPredicted RBP13.23□□□□□ -0.29
PKNOX1-201ENST00000291547 SLC4A10Q6U841 1118 aa13.23□□□□□ -0.29
PKNOX1-201ENST00000291547 TSR1Q2NL82 804 aaKnown RBP13.23□□□□□ -0.29
PKNOX1-201ENST00000291547 BRPF3Q9ULD4 1205 aa13.23□□□□□ -0.29
PKNOX1-201ENST00000291547 CHMP3Q9Y3E7 222 aa13.23□□□□□ -0.29
PKNOX1-201ENST00000291547 C9orf84Q5VXU9 1444 aa13.23□□□□□ -0.29
PKNOX1-201ENST00000291547 CALRP27797 417 aaKnown RBP13.22□□□□□ -0.29
PKNOX1-201ENST00000291547 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
PKNOX1-201ENST00000291547 CHMP4AQ9BY43 222 aa13.22□□□□□ -0.29
PKNOX1-201ENST00000291547 HDAC5Q9UQL6 1122 aa13.22□□□□□ -0.29
PKNOX1-201ENST00000291547 DAPK1P53355 1430 aa13.22□□□□□ -0.29
PKNOX1-201ENST00000291547 STK26Q9P289 416 aa13.22□□□□□ -0.29
PKNOX1-201ENST00000291547 ATP10BO94823 1461 aa13.22□□□□□ -0.29
PKNOX1-201ENST00000291547 FAM161AQ3B820 660 aa13.22□□□□□ -0.29
PKNOX1-201ENST00000291547 TPD52L1Q16890 204 aaPredicted RBP13.21□□□□□ -0.29
PKNOX1-201ENST00000291547 TOMM22Q9NS69 142 aa13.21□□□□□ -0.29
PKNOX1-201ENST00000291547 ATP6V1DQ9Y5K8 247 aa13.21□□□□□ -0.29
PKNOX1-201ENST00000291547 L3MBTL2Q969R5 705 aa13.2□□□□□ -0.3
PKNOX1-201ENST00000291547 PTPN23Q9H3S7 1636 aa13.2□□□□□ -0.3
PKNOX1-201ENST00000291547 SAMD9Q5K651 1589 aa13.2□□□□□ -0.3
PKNOX1-201ENST00000291547 H3BQV1 296 aa13.2□□□□□ -0.3
PKNOX1-201ENST00000291547 TAF7LQ5H9L4 462 aa13.2□□□□□ -0.3
PKNOX1-201ENST00000291547 IFFO2Q5TF58 517 aa13.2□□□□□ -0.3
PKNOX1-201ENST00000291547 CCDC70Q6NSX1 233 aa13.2□□□□□ -0.3
PKNOX1-201ENST00000291547 CCDC146Q8IYE0 955 aa13.2□□□□□ -0.3
PKNOX1-201ENST00000291547 HFM1A2PYH4 1435 aa13.19□□□□□ -0.3
PKNOX1-201ENST00000291547 TPM1P09493 284 aa13.19□□□□□ -0.3
PKNOX1-201ENST00000291547 TEX35Q5T0J7 233 aa13.19□□□□□ -0.3
PKNOX1-201ENST00000291547 NLRP13Q86W25 1043 aa13.19□□□□□ -0.3
PKNOX1-201ENST00000291547 CAMSAP2Q08AD1 1489 aa13.19□□□□□ -0.3
PKNOX1-201ENST00000291547 CCDC144AA2RUR9 1427 aa13.19□□□□□ -0.3
PKNOX1-201ENST00000291547 HDGFP51858 240 aaKnown RBP13.18□□□□□ -0.3
PKNOX1-201ENST00000291547 CENPQQ7L2Z9 268 aaPredicted RBP13.18□□□□□ -0.3
PKNOX1-201ENST00000291547 MARCH6O60337 910 aa13.18□□□□□ -0.3
PKNOX1-201ENST00000291547 FAM184AQ8NB25 1140 aa13.18□□□□□ -0.3
PKNOX1-201ENST00000291547 SCAPERQ9BY12 1400 aa13.17□□□□□ -0.3
PKNOX1-201ENST00000291547 CD109Q6YHK3 1445 aa13.17□□□□□ -0.3
PKNOX1-201ENST00000291547 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
PKNOX1-201ENST00000291547 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.16□□□□□ -0.3
PKNOX1-201ENST00000291547 CFAP43Q8NDM7 1665 aa13.15□□□□□ -0.3
PKNOX1-201ENST00000291547 ROCK2O75116 1388 aaKnown RBP13.15□□□□□ -0.3
PKNOX1-201ENST00000291547 HOMER1Q86YM7 354 aa13.15□□□□□ -0.3
PKNOX1-201ENST00000291547 RILPL2Q969X0 211 aa13.15□□□□□ -0.3
PKNOX1-201ENST00000291547 CCDC141Q6ZP82 1450 aa13.15□□□□□ -0.3
PKNOX1-201ENST00000291547 IPO7O95373 1038 aaKnown RBP13.15□□□□□ -0.3
PKNOX1-201ENST00000291547 CSB-PGBD3P0DP91 1061 aa13.15□□□□□ -0.3
PKNOX1-201ENST00000291547 ROCK1Q13464 1354 aa13.15□□□□□ -0.3
PKNOX1-201ENST00000291547 ANKRD45Q5TZF3 282 aa13.14□□□□□ -0.31
PKNOX1-201ENST00000291547 GPATCH8Q9UKJ3 1502 aaKnown RBP13.13□□□□□ -0.31
PKNOX1-201ENST00000291547 ABCC5O15440 1437 aa13.13□□□□□ -0.31
PKNOX1-201ENST00000291547 EXOC6Q8TAG9 804 aa13.13□□□□□ -0.31
PKNOX1-201ENST00000291547 NFKBIBQ15653 356 aa13.13□□□□□ -0.31
PKNOX1-201ENST00000291547 MCTP1Q6DN14 999 aa13.13□□□□□ -0.31
PKNOX1-201ENST00000291547 WWC1Q8IX03 1113 aa13.13□□□□□ -0.31
PKNOX1-201ENST00000291547 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
PKNOX1-201ENST00000291547 PLIN1O60240 522 aa13.13□□□□□ -0.31
PKNOX1-201ENST00000291547 NAIPQ13075 1403 aa13.12□□□□□ -0.31
PKNOX1-201ENST00000291547 ABCC2Q92887 1545 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms