RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 SETBP1Q9Y6X0 1596 aa14.09□□□□□ -0.15
C9orf43-201ENST00000288462 PRKRIP1Q9H875 184 aaPredicted RBP14.09□□□□□ -0.15
C9orf43-201ENST00000288462 TESK2Q96S53 571 aa14.08□□□□□ -0.16
C9orf43-201ENST00000288462 MYO3AQ8NEV4 1616 aa14.08□□□□□ -0.16
C9orf43-201ENST00000288462 CLTCQ00610 1675 aaKnown RBP14.07□□□□□ -0.16
C9orf43-201ENST00000288462 NEXMIFQ5QGS0 1516 aa14.07□□□□□ -0.16
C9orf43-201ENST00000288462 DISP3Q9P2K9 1392 aa14.06□□□□□ -0.16
C9orf43-201ENST00000288462 PIK3C2GO75747 1445 aa14.06□□□□□ -0.16
C9orf43-201ENST00000288462 MYO5BQ9ULV0 1848 aa14.06□□□□□ -0.16
C9orf43-201ENST00000288462 TMEM131LA2VDJ0 1609 aa14.05□□□□□ -0.16
C9orf43-201ENST00000288462 ADGRF5Q8IZF2 1346 aa14.05□□□□□ -0.16
C9orf43-201ENST00000288462 ERVK-7P63135 1459 aa14.04□□□□□ -0.16
C9orf43-201ENST00000288462 RPGRIP1LQ68CZ1 1315 aa14.04□□□□□ -0.16
C9orf43-201ENST00000288462 POLR3GLQ9BT43 218 aa14.03□□□□□ -0.16
C9orf43-201ENST00000288462 PPP6R1Q9UPN7 881 aa14.03□□□□□ -0.16
C9orf43-201ENST00000288462 GTF3C3Q9Y5Q9 886 aa14.03□□□□□ -0.16
C9orf43-201ENST00000288462 EIF3AQ14152 1382 aaKnown RBP14.03□□□□□ -0.16
C9orf43-201ENST00000288462 ADGRB1O14514 1584 aa14.03□□□□□ -0.16
C9orf43-201ENST00000288462 SPATA31D1Q6ZQQ2 1576 aa14.02□□□□□ -0.16
C9orf43-201ENST00000288462 MYOM1P52179 1685 aa14.02□□□□□ -0.16
C9orf43-201ENST00000288462 KDM5AP29375 1690 aaKnown RBP14.01□□□□□ -0.17
C9orf43-201ENST00000288462 TMF1P82094 1093 aa14□□□□□ -0.17
C9orf43-201ENST00000288462 ZFYVE9O95405 1425 aa14□□□□□ -0.17
C9orf43-201ENST00000288462 KTN1Q86UP2 1357 aaKnown RBP14□□□□□ -0.17
C9orf43-201ENST00000288462 SLC52A1Q9NWF4 448 aa14□□□□□ -0.17
C9orf43-201ENST00000288462 CFAP70Q5T0N1 1121 aa13.99□□□□□ -0.17
C9orf43-201ENST00000288462 CHGAP10645 457 aaKnown RBP13.99□□□□□ -0.17
C9orf43-201ENST00000288462 CCDC184Q52MB2 194 aa13.98□□□□□ -0.17
C9orf43-201ENST00000288462 SBNO2Q9Y2G9 1366 aa13.98□□□□□ -0.17
C9orf43-201ENST00000288462 QRICH2Q9H0J4 1663 aa13.98□□□□□ -0.17
C9orf43-201ENST00000288462 IDI1Q13907 227 aa13.97□□□□□ -0.17
C9orf43-201ENST00000288462 ARHGEF28Q8N1W1 1705 aaKnown RBP13.97□□□□□ -0.17
C9orf43-201ENST00000288462 C14orf93Q9H972 538 aaKnown RBP13.96□□□□□ -0.17
C9orf43-201ENST00000288462 MRS2Q9HD23 443 aa13.95□□□□□ -0.18
C9orf43-201ENST00000288462 PARD3Q8TEW0 1356 aa13.94□□□□□ -0.18
C9orf43-201ENST00000288462 ASXL1Q8IXJ9 1541 aa13.94□□□□□ -0.18
C9orf43-201ENST00000288462 PER1O15534 1290 aaPredicted RBP13.93□□□□□ -0.18
C9orf43-201ENST00000288462 CDCA8Q53HL2 280 aa13.93□□□□□ -0.18
C9orf43-201ENST00000288462 VGFO15240 615 aaPredicted RBP13.93□□□□□ -0.18
C9orf43-201ENST00000288462 FBXO31Q5XUX0 539 aaPredicted RBP13.93□□□□□ -0.18
C9orf43-201ENST00000288462 SLC24A1O60721 1099 aa13.92□□□□□ -0.18
C9orf43-201ENST00000288462 RALBP1Q15311 655 aa13.92□□□□□ -0.18
C9orf43-201ENST00000288462 A2ML1A8K2U0 1454 aa13.91□□□□□ -0.18
C9orf43-201ENST00000288462 BRD4O60885 1362 aaPredicted RBP13.9□□□□□ -0.18
C9orf43-201ENST00000288462 MYBBP1AQ9BQG0 1328 aaKnown RBP13.9□□□□□ -0.18
C9orf43-201ENST00000288462 SETD1AO15047 1707 aaKnown RBP13.89□□□□□ -0.19
C9orf43-201ENST00000288462 PANK3Q9H999 370 aa13.89□□□□□ -0.19
C9orf43-201ENST00000288462 CENPJQ9HC77 1338 aaPredicted RBP13.89□□□□□ -0.19
C9orf43-201ENST00000288462 HNRNPUQ00839 825 aaKnown RBP eCLIP13.88□□□□□ -0.19
C9orf43-201ENST00000288462 ALKQ9UM73 1620 aa13.87□□□□□ -0.19
C9orf43-201ENST00000288462 MLECQ14165 292 aa13.87□□□□□ -0.19
C9orf43-201ENST00000288462 ZMYM3Q14202 1370 aa13.87□□□□□ -0.19
C9orf43-201ENST00000288462 TULP4Q9NRJ4 1543 aa13.86□□□□□ -0.19
C9orf43-201ENST00000288462 UBR1Q8IWV7 1749 aa13.85□□□□□ -0.19
C9orf43-201ENST00000288462 FAM9BQ8IZU0 186 aa13.85□□□□□ -0.19
C9orf43-201ENST00000288462 LRPPRCP42704 1394 aaKnown RBP13.85□□□□□ -0.19
C9orf43-201ENST00000288462 NUTM2DQ5VT03 806 aaPredicted RBP13.85□□□□□ -0.19
C9orf43-201ENST00000288462 TMEM132EQ6IEE7 984 aa13.85□□□□□ -0.19
C9orf43-201ENST00000288462 NPC1L1Q9UHC9 1359 aa13.85□□□□□ -0.19
C9orf43-201ENST00000288462 NRXN3Q9Y4C0 1643 aa13.85□□□□□ -0.19
C9orf43-201ENST00000288462 PTPRMP28827 1452 aa13.84□□□□□ -0.19
C9orf43-201ENST00000288462 CNGB1Q14028 1251 aaPredicted RBP13.84□□□□□ -0.19
C9orf43-201ENST00000288462 TRAK1Q9UPV9 953 aa13.84□□□□□ -0.19
C9orf43-201ENST00000288462 RIMS2Q9UQ26 1411 aa13.84□□□□□ -0.19
C9orf43-201ENST00000288462 NLRP13Q86W25 1043 aa13.84□□□□□ -0.19
C9orf43-201ENST00000288462 PNISRQ8TF01 805 aaKnown RBP13.84□□□□□ -0.19
C9orf43-201ENST00000288462 FER1L4A9Z1Z3 1794 aa13.83□□□□□ -0.19
C9orf43-201ENST00000288462 ZBED9Q6R2W3 1325 aa13.83□□□□□ -0.19
C9orf43-201ENST00000288462 USP32Q8NFA0 1604 aa13.83□□□□□ -0.2
C9orf43-201ENST00000288462 TNRQ92752 1358 aa13.83□□□□□ -0.2
C9orf43-201ENST00000288462 C3P01024 1663 aa13.82□□□□□ -0.2
C9orf43-201ENST00000288462 TMC1Q8TDI8 760 aa13.82□□□□□ -0.2
C9orf43-201ENST00000288462 ESF1Q9H501 851 aaKnown RBP13.82□□□□□ -0.2
C9orf43-201ENST00000288462 YTHDC2Q9H6S0 1430 aaKnown RBP13.81□□□□□ -0.2
C9orf43-201ENST00000288462 AMER1Q5JTC6 1135 aaPredicted RBP13.81□□□□□ -0.2
C9orf43-201ENST00000288462 DLC1Q96QB1 1528 aa13.81□□□□□ -0.2
C9orf43-201ENST00000288462 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
C9orf43-201ENST00000288462 CC2D1BQ5T0F9 858 aaKnown RBP13.8□□□□□ -0.2
C9orf43-201ENST00000288462 PUS7Q96PZ0 661 aaKnown RBP13.79□□□□□ -0.2
C9orf43-201ENST00000288462 KNSTRNQ9Y448 316 aa13.79□□□□□ -0.2
C9orf43-201ENST00000288462 KNDC1Q76NI1 1749 aa13.79□□□□□ -0.2
C9orf43-201ENST00000288462 NLRP1Q9C000 1473 aa13.79□□□□□ -0.2
C9orf43-201ENST00000288462 INSRP06213 1382 aa13.79□□□□□ -0.2
C9orf43-201ENST00000288462 EVC2Q86UK5 1308 aa13.76□□□□□ -0.21
C9orf43-201ENST00000288462 SUPT16HQ9Y5B9 1047 aaKnown RBP13.76□□□□□ -0.21
C9orf43-201ENST00000288462 BLMP54132 1417 aaPredicted RBP13.75□□□□□ -0.21
C9orf43-201ENST00000288462 TRHP20396 242 aaPredicted RBP13.75□□□□□ -0.21
C9orf43-201ENST00000288462 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.75□□□□□ -0.21
C9orf43-201ENST00000288462 CARD14Q9BXL6 1004 aa13.75□□□□□ -0.21
C9orf43-201ENST00000288462 TMEM2Q9UHN6 1383 aa13.74□□□□□ -0.21
C9orf43-201ENST00000288462 NINLQ9Y2I6 1382 aa13.74□□□□□ -0.21
C9orf43-201ENST00000288462 PPP2R1AP30153 589 aa13.73□□□□□ -0.21
C9orf43-201ENST00000288462 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
C9orf43-201ENST00000288462 CPS1P31327 1500 aa13.73□□□□□ -0.21
C9orf43-201ENST00000288462 STK26Q9P289 416 aa13.72□□□□□ -0.21
C9orf43-201ENST00000288462 ANKRD36BQ8N2N9 1353 aa13.72□□□□□ -0.21
C9orf43-201ENST00000288462 TECPR2O15040 1411 aa13.72□□□□□ -0.21
C9orf43-201ENST00000288462 SLIT1O75093 1534 aa13.71□□□□□ -0.21
C9orf43-201ENST00000288462 ABCC11Q96J66 1382 aa13.71□□□□□ -0.21
C9orf43-201ENST00000288462 SMG6Q86US8 1419 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms