RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 POLR1AO95602 1720 aaPredicted RBP10.39□□□□□ -0.75
TRIM42-201ENST00000286349 BCL11BQ9C0K0 894 aaPredicted RBP10.39□□□□□ -0.75
TRIM42-201ENST00000286349 PTPRMP28827 1452 aa10.38□□□□□ -0.75
TRIM42-201ENST00000286349 RALGAPBQ86X10 1494 aa10.38□□□□□ -0.75
TRIM42-201ENST00000286349 CCDC144AA2RUR9 1427 aa10.38□□□□□ -0.75
TRIM42-201ENST00000286349 NOS1P29475 1434 aa10.38□□□□□ -0.75
TRIM42-201ENST00000286349 TAOK2Q9UL54 1235 aa10.38□□□□□ -0.75
TRIM42-201ENST00000286349 WASHC2AQ641Q2 1341 aa10.38□□□□□ -0.75
TRIM42-201ENST00000286349 AEBP2Q6ZN18 517 aaPredicted RBP10.38□□□□□ -0.75
TRIM42-201ENST00000286349 ZC3H13Q5T200 1668 aaKnown RBP10.37□□□□□ -0.75
TRIM42-201ENST00000286349 RIMS1Q86UR5 1692 aaKnown RBP10.37□□□□□ -0.75
TRIM42-201ENST00000286349 FER1L4A9Z1Z3 1794 aa10.37□□□□□ -0.75
TRIM42-201ENST00000286349 CCDC136Q96JN2 1154 aa10.37□□□□□ -0.75
TRIM42-201ENST00000286349 CCDC7Q96M83 1385 aa10.37□□□□□ -0.75
TRIM42-201ENST00000286349 ERVK-7P63135 1459 aa10.36□□□□□ -0.75
TRIM42-201ENST00000286349 IDI1Q13907 227 aa10.36□□□□□ -0.75
TRIM42-201ENST00000286349 MROH2AA6NES4 1674 aa10.35□□□□□ -0.75
TRIM42-201ENST00000286349 C3P01024 1663 aa10.35□□□□□ -0.75
TRIM42-201ENST00000286349 USP47Q96K76 1375 aa10.34□□□□□ -0.75
TRIM42-201ENST00000286349 SYNMO15061 1565 aa10.34□□□□□ -0.75
TRIM42-201ENST00000286349 SPATA31D1Q6ZQQ2 1576 aa10.34□□□□□ -0.75
TRIM42-201ENST00000286349 UGGT1Q9NYU2 1555 aa10.34□□□□□ -0.75
TRIM42-201ENST00000286349 BRD2P25440 801 aaKnown RBP10.34□□□□□ -0.75
TRIM42-201ENST00000286349 TNRQ92752 1358 aa10.33□□□□□ -0.76
TRIM42-201ENST00000286349 ROCK2O75116 1388 aaKnown RBP10.32□□□□□ -0.76
TRIM42-201ENST00000286349 PREX1Q8TCU6 1659 aa10.32□□□□□ -0.76
TRIM42-201ENST00000286349 AAMPQ13685 434 aa10.32□□□□□ -0.76
TRIM42-201ENST00000286349 CFAP65Q6ZU64 1925 aaKnown RBP10.32□□□□□ -0.76
TRIM42-201ENST00000286349 STAC3Q96MF2 364 aa10.32□□□□□ -0.76
TRIM42-201ENST00000286349 SLC52A1Q9NWF4 448 aa10.32□□□□□ -0.76
TRIM42-201ENST00000286349 TRPM2O94759 1503 aa10.31□□□□□ -0.76
TRIM42-201ENST00000286349 GLIPR1L2Q4G1C9 344 aa10.31□□□□□ -0.76
TRIM42-201ENST00000286349 DCAF11Q8TEB1 546 aa10.31□□□□□ -0.76
TRIM42-201ENST00000286349 CHMP4AQ9BY43 222 aa10.31□□□□□ -0.76
TRIM42-201ENST00000286349 CARD11Q9BXL7 1154 aa10.31□□□□□ -0.76
TRIM42-201ENST00000286349 FBXO3Q9UK99 471 aa10.31□□□□□ -0.76
TRIM42-201ENST00000286349 KIF7Q2M1P5 1343 aa10.31□□□□□ -0.76
TRIM42-201ENST00000286349 LAMC1P11047 1609 aa10.3□□□□□ -0.76
TRIM42-201ENST00000286349 ZNF326Q5BKZ1 582 aaKnown RBP10.3□□□□□ -0.76
TRIM42-201ENST00000286349 PRAG1Q86YV5 1406 aa10.3□□□□□ -0.76
TRIM42-201ENST00000286349 CLTCL1P53675 1640 aa10.3□□□□□ -0.76
TRIM42-201ENST00000286349 SPHKAPQ2M3C7 1700 aa10.29□□□□□ -0.76
TRIM42-201ENST00000286349 C14orf37Q86TY3 774 aa10.29□□□□□ -0.76
TRIM42-201ENST00000286349 PIK3C2BO00750 1634 aa10.29□□□□□ -0.76
TRIM42-201ENST00000286349 TRPM1Q7Z4N2 1603 aa10.28□□□□□ -0.76
TRIM42-201ENST00000286349 C11orf95C9JLR9 678 aaPredicted RBP10.28□□□□□ -0.76
TRIM42-201ENST00000286349 NEURL4Q96JN8 1562 aa10.28□□□□□ -0.76
TRIM42-201ENST00000286349 GPRASP1Q5JY77 1395 aa10.28□□□□□ -0.76
TRIM42-201ENST00000286349 RGL3Q3MIN7 710 aa10.28□□□□□ -0.76
TRIM42-201ENST00000286349 TSHZ2Q9NRE2 1034 aa10.28□□□□□ -0.76
TRIM42-201ENST00000286349 CHGAP10645 457 aaKnown RBP10.27□□□□□ -0.77
TRIM42-201ENST00000286349 KDM2AQ9Y2K7 1162 aa10.27□□□□□ -0.77
TRIM42-201ENST00000286349 NLRP1Q9C000 1473 aa10.27□□□□□ -0.77
TRIM42-201ENST00000286349 A2ML1A8K2U0 1454 aa10.26□□□□□ -0.77
TRIM42-201ENST00000286349 RSPH6AQ9H0K4 717 aa10.26□□□□□ -0.77
TRIM42-201ENST00000286349 PRKRIP1Q9H875 184 aaPredicted RBP10.26□□□□□ -0.77
TRIM42-201ENST00000286349 TMEM131LA2VDJ0 1609 aa10.25□□□□□ -0.77
TRIM42-201ENST00000286349 LTKP29376 864 aa10.24□□□□□ -0.77
TRIM42-201ENST00000286349 ADGRB3O60242 1522 aa10.24□□□□□ -0.77
TRIM42-201ENST00000286349 MYO3AQ8NEV4 1616 aa10.24□□□□□ -0.77
TRIM42-201ENST00000286349 KTN1Q86UP2 1357 aaKnown RBP10.24□□□□□ -0.77
TRIM42-201ENST00000286349 HSPA2P54652 639 aa10.24□□□□□ -0.77
TRIM42-201ENST00000286349 NUTM2DQ5VT03 806 aaPredicted RBP10.24□□□□□ -0.77
TRIM42-201ENST00000286349 THEMISQ8N1K5 641 aaPredicted RBP10.23□□□□□ -0.77
TRIM42-201ENST00000286349 STAG3Q9UJ98 1225 aa10.23□□□□□ -0.77
TRIM42-201ENST00000286349 SUPT16HQ9Y5B9 1047 aaKnown RBP10.23□□□□□ -0.77
TRIM42-201ENST00000286349 LMTK3Q96Q04 1460 aa10.23□□□□□ -0.77
TRIM42-201ENST00000286349 CEP170BQ9Y4F5 1589 aaPredicted RBP10.22□□□□□ -0.77
TRIM42-201ENST00000286349 SETD1BQ9UPS6 1966 aaKnown RBP10.22□□□□□ -0.77
TRIM42-201ENST00000286349 TMEM2Q9UHN6 1383 aa10.22□□□□□ -0.77
TRIM42-201ENST00000286349 ST20-MTHFSA0A0A6YYL1 179 aa10.22□□□□□ -0.77
TRIM42-201ENST00000286349 SAMD1Q6SPF0 538 aaPredicted RBP10.22□□□□□ -0.77
TRIM42-201ENST00000286349 ZFYVE9O95405 1425 aa10.22□□□□□ -0.77
TRIM42-201ENST00000286349 UBR1Q8IWV7 1749 aa10.22□□□□□ -0.77
TRIM42-201ENST00000286349 ADGRF5Q8IZF2 1346 aa10.21□□□□□ -0.78
TRIM42-201ENST00000286349 ARHGAP23Q9P227 1491 aa10.21□□□□□ -0.78
TRIM42-201ENST00000286349 RPGRIP1LQ68CZ1 1315 aa10.2□□□□□ -0.78
TRIM42-201ENST00000286349 RIMS2Q9UQ26 1411 aa10.2□□□□□ -0.78
TRIM42-201ENST00000286349 A0A0U1RQG5 324 aaPredicted RBP10.2□□□□□ -0.78
TRIM42-201ENST00000286349 RBM10P98175 930 aaKnown RBP10.2□□□□□ -0.78
TRIM42-201ENST00000286349 SENP3Q9H4L4 574 aaPredicted RBP10.2□□□□□ -0.78
TRIM42-201ENST00000286349 DHX37Q8IY37 1157 aaKnown RBP10.2□□□□□ -0.78
TRIM42-201ENST00000286349 ZMYND15Q9H091 742 aa10.2□□□□□ -0.78
TRIM42-201ENST00000286349 NCKAP5LQ9HCH0 1330 aa10.19□□□□□ -0.78
TRIM42-201ENST00000286349 MYO5BQ9ULV0 1848 aa10.19□□□□□ -0.78
TRIM42-201ENST00000286349 NEXMIFQ5QGS0 1516 aa10.19□□□□□ -0.78
TRIM42-201ENST00000286349 TXNDC2Q86VQ3 553 aa10.19□□□□□ -0.78
TRIM42-201ENST00000286349 CNKSR2Q8WXI2 1034 aa10.19□□□□□ -0.78
TRIM42-201ENST00000286349 ZNF142P52746 1687 aaPredicted RBP10.19□□□□□ -0.78
TRIM42-201ENST00000286349 SLIT1O75093 1534 aa10.19□□□□□ -0.78
TRIM42-201ENST00000286349 TPRNQ4KMQ1 711 aa10.18□□□□□ -0.78
TRIM42-201ENST00000286349 KIAA1210Q9ULL0 1709 aa10.18□□□□□ -0.78
TRIM42-201ENST00000286349 KIF1BO60333 1816 aa10.18□□□□□ -0.78
TRIM42-201ENST00000286349 KCNA4P22459 653 aa10.18□□□□□ -0.78
TRIM42-201ENST00000286349 MRS2Q9HD23 443 aa10.18□□□□□ -0.78
TRIM42-201ENST00000286349 KDM5AP29375 1690 aaKnown RBP10.18□□□□□ -0.78
TRIM42-201ENST00000286349 MYOM2P54296 1465 aa10.17□□□□□ -0.78
TRIM42-201ENST00000286349 DEKP35659 375 aaKnown RBP10.17□□□□□ -0.78
TRIM42-201ENST00000286349 ANKLE2Q86XL3 938 aa10.17□□□□□ -0.78
TRIM42-201ENST00000286349 VGFO15240 615 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms