RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 REREQ9P2R6 1566 aa14.12□□□□□ -0.15
ERCC3-201ENST00000285398 EFCAB6Q5THR3 1501 aa14.12□□□□□ -0.15
ERCC3-201ENST00000285398 EIF4G2P78344 907 aaKnown RBP eCLIP14.12□□□□□ -0.15
ERCC3-201ENST00000285398 PRKRIP1Q9H875 184 aaPredicted RBP14.12□□□□□ -0.15
ERCC3-201ENST00000285398 CEBPAP49715 358 aaPredicted RBP14.11□□□□□ -0.15
ERCC3-201ENST00000285398 NUTM2DQ5VT03 806 aaPredicted RBP14.11□□□□□ -0.15
ERCC3-201ENST00000285398 ESF1Q9H501 851 aaKnown RBP14.11□□□□□ -0.15
ERCC3-201ENST00000285398 AGLP35573 1532 aa14.11□□□□□ -0.15
ERCC3-201ENST00000285398 LMTK2Q8IWU2 1503 aa14.1□□□□□ -0.15
ERCC3-201ENST00000285398 CCDC7Q96M83 1385 aa14.1□□□□□ -0.15
ERCC3-201ENST00000285398 FAM9BQ8IZU0 186 aa14.1□□□□□ -0.15
ERCC3-201ENST00000285398 PTPRTO14522 1441 aa14.09□□□□□ -0.15
ERCC3-201ENST00000285398 MRS2Q9HD23 443 aa14.09□□□□□ -0.15
ERCC3-201ENST00000285398 IDI1Q13907 227 aa14.08□□□□□ -0.16
ERCC3-201ENST00000285398 IL27Q8NEV9 243 aa14.08□□□□□ -0.16
ERCC3-201ENST00000285398 CCDC136Q96JN2 1154 aa14.08□□□□□ -0.16
ERCC3-201ENST00000285398 CLTCL1P53675 1640 aa14.07□□□□□ -0.16
ERCC3-201ENST00000285398 USP35Q9P2H5 1018 aa14.07□□□□□ -0.16
ERCC3-201ENST00000285398 CAMSAP1Q5T5Y3 1602 aa14.07□□□□□ -0.16
ERCC3-201ENST00000285398 SMG6Q86US8 1419 aaKnown RBP14.06□□□□□ -0.16
ERCC3-201ENST00000285398 TRPM2O94759 1503 aa14.06□□□□□ -0.16
ERCC3-201ENST00000285398 SPHKAPQ2M3C7 1700 aa14.06□□□□□ -0.16
ERCC3-201ENST00000285398 POLR1AO95602 1720 aaPredicted RBP14.05□□□□□ -0.16
ERCC3-201ENST00000285398 SPATA31E1Q6ZUB1 1445 aa14.05□□□□□ -0.16
ERCC3-201ENST00000285398 ZMYM3Q14202 1370 aa14.05□□□□□ -0.16
ERCC3-201ENST00000285398 C11orf95C9JLR9 678 aaPredicted RBP14.05□□□□□ -0.16
ERCC3-201ENST00000285398 NBPF1Q3BBV0 1214 aa14.05□□□□□ -0.16
ERCC3-201ENST00000285398 CLTCQ00610 1675 aaKnown RBP14.05□□□□□ -0.16
ERCC3-201ENST00000285398 RNF123Q5XPI4 1314 aa14.04□□□□□ -0.16
ERCC3-201ENST00000285398 PPP6R1Q9UPN7 881 aa14.02□□□□□ -0.16
ERCC3-201ENST00000285398 ZC3H13Q5T200 1668 aaKnown RBP14.02□□□□□ -0.16
ERCC3-201ENST00000285398 NOS1P29475 1434 aa14.02□□□□□ -0.17
ERCC3-201ENST00000285398 ARHGAP31Q2M1Z3 1444 aa14.01□□□□□ -0.17
ERCC3-201ENST00000285398 ARXQ96QS3 562 aa14.01□□□□□ -0.17
ERCC3-201ENST00000285398 SYNMO15061 1565 aa14.01□□□□□ -0.17
ERCC3-201ENST00000285398 ADGRF5Q8IZF2 1346 aa14.01□□□□□ -0.17
ERCC3-201ENST00000285398 STAG3Q9UJ98 1225 aa14□□□□□ -0.17
ERCC3-201ENST00000285398 UBE2Q2Q8WVN8 375 aa14□□□□□ -0.17
ERCC3-201ENST00000285398 CARD11Q9BXL7 1154 aa14□□□□□ -0.17
ERCC3-201ENST00000285398 NUDCQ9Y266 331 aa14□□□□□ -0.17
ERCC3-201ENST00000285398 NEFMP07197 916 aa13.98□□□□□ -0.17
ERCC3-201ENST00000285398 ERVK-7P63135 1459 aa13.98□□□□□ -0.17
ERCC3-201ENST00000285398 KIF7Q2M1P5 1343 aa13.98□□□□□ -0.17
ERCC3-201ENST00000285398 PRAG1Q86YV5 1406 aa13.98□□□□□ -0.17
ERCC3-201ENST00000285398 ROCK2O75116 1388 aaKnown RBP13.97□□□□□ -0.17
ERCC3-201ENST00000285398 MROH2AA6NES4 1674 aa13.97□□□□□ -0.17
ERCC3-201ENST00000285398 PPM1GO15355 546 aaPredicted RBP13.97□□□□□ -0.17
ERCC3-201ENST00000285398 CFAP70Q5T0N1 1121 aa13.97□□□□□ -0.17
ERCC3-201ENST00000285398 SLC52A1Q9NWF4 448 aa13.96□□□□□ -0.17
ERCC3-201ENST00000285398 PREX1Q8TCU6 1659 aa13.96□□□□□ -0.17
ERCC3-201ENST00000285398 POLR3GLQ9BT43 218 aa13.94□□□□□ -0.18
ERCC3-201ENST00000285398 UHRF1BP1Q6BDS2 1440 aa13.94□□□□□ -0.18
ERCC3-201ENST00000285398 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.94□□□□□ -0.18
ERCC3-201ENST00000285398 USP47Q96K76 1375 aa13.93□□□□□ -0.18
ERCC3-201ENST00000285398 TCERG1O14776 1098 aaKnown RBP13.93□□□□□ -0.18
ERCC3-201ENST00000285398 TMEM132EQ6IEE7 984 aa13.93□□□□□ -0.18
ERCC3-201ENST00000285398 ST20-MTHFSA0A0A6YYL1 179 aa13.93□□□□□ -0.18
ERCC3-201ENST00000285398 KLHL34Q8N239 644 aa13.93□□□□□ -0.18
ERCC3-201ENST00000285398 KIF1BO60333 1816 aa13.92□□□□□ -0.18
ERCC3-201ENST00000285398 PIK3C2BO00750 1634 aa13.92□□□□□ -0.18
ERCC3-201ENST00000285398 ADGRB3O60242 1522 aa13.92□□□□□ -0.18
ERCC3-201ENST00000285398 TNRQ92752 1358 aa13.91□□□□□ -0.18
ERCC3-201ENST00000285398 NPM2Q86SE8 214 aaKnown RBP13.91□□□□□ -0.18
ERCC3-201ENST00000285398 LAS1LQ9Y4W2 734 aaKnown RBP13.91□□□□□ -0.18
ERCC3-201ENST00000285398 FER1L4A9Z1Z3 1794 aa13.91□□□□□ -0.18
ERCC3-201ENST00000285398 RALGAPBQ86X10 1494 aa13.9□□□□□ -0.18
ERCC3-201ENST00000285398 SPATA31D1Q6ZQQ2 1576 aa13.9□□□□□ -0.18
ERCC3-201ENST00000285398 MADDQ8WXG6 1647 aa13.9□□□□□ -0.18
ERCC3-201ENST00000285398 MYO5BQ9ULV0 1848 aa13.9□□□□□ -0.18
ERCC3-201ENST00000285398 C3P01024 1663 aa13.88□□□□□ -0.19
ERCC3-201ENST00000285398 MS4A1P11836 297 aa13.88□□□□□ -0.19
ERCC3-201ENST00000285398 PDE4AP27815 886 aa13.87□□□□□ -0.19
ERCC3-201ENST00000285398 TMEM131LA2VDJ0 1609 aa13.86□□□□□ -0.19
ERCC3-201ENST00000285398 VGFO15240 615 aaPredicted RBP13.86□□□□□ -0.19
ERCC3-201ENST00000285398 CNGB1Q14028 1251 aaPredicted RBP13.86□□□□□ -0.19
ERCC3-201ENST00000285398 GSE1Q14687 1217 aa13.86□□□□□ -0.19
ERCC3-201ENST00000285398 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
ERCC3-201ENST00000285398 TRPM1Q7Z4N2 1603 aa13.86□□□□□ -0.19
ERCC3-201ENST00000285398 A2ML1A8K2U0 1454 aa13.86□□□□□ -0.19
ERCC3-201ENST00000285398 STK26Q9P289 416 aa13.86□□□□□ -0.19
ERCC3-201ENST00000285398 TRAK1Q9UPV9 953 aa13.86□□□□□ -0.19
ERCC3-201ENST00000285398 RIMS1Q86UR5 1692 aaKnown RBP13.86□□□□□ -0.19
ERCC3-201ENST00000285398 DDRGK1Q96HY6 314 aa13.85□□□□□ -0.19
ERCC3-201ENST00000285398 BACH2Q9BYV9 841 aa13.85□□□□□ -0.19
ERCC3-201ENST00000285398 NEURL4Q96JN8 1562 aa13.85□□□□□ -0.19
ERCC3-201ENST00000285398 NEXMIFQ5QGS0 1516 aa13.85□□□□□ -0.19
ERCC3-201ENST00000285398 ADAMTSL3P82987 1691 aa13.84□□□□□ -0.19
ERCC3-201ENST00000285398 SAFB2Q14151 953 aaKnown RBP eCLIP13.84□□□□□ -0.19
ERCC3-201ENST00000285398 PNISRQ8TF01 805 aaKnown RBP13.83□□□□□ -0.19
ERCC3-201ENST00000285398 RPGRIP1LQ68CZ1 1315 aa13.83□□□□□ -0.19
ERCC3-201ENST00000285398 LTKP29376 864 aa13.83□□□□□ -0.2
ERCC3-201ENST00000285398 PIK3C2GO75747 1445 aa13.83□□□□□ -0.2
ERCC3-201ENST00000285398 IFT172Q9UG01 1749 aa13.83□□□□□ -0.2
ERCC3-201ENST00000285398 C14orf93Q9H972 538 aaKnown RBP13.83□□□□□ -0.2
ERCC3-201ENST00000285398 MYOM2P54296 1465 aa13.82□□□□□ -0.2
ERCC3-201ENST00000285398 RIMS2Q9UQ26 1411 aa13.82□□□□□ -0.2
ERCC3-201ENST00000285398 BRPF3Q9ULD4 1205 aa13.82□□□□□ -0.2
ERCC3-201ENST00000285398 PPLO60437 1756 aa13.82□□□□□ -0.2
ERCC3-201ENST00000285398 GPRASP1Q5JY77 1395 aa13.82□□□□□ -0.2
ERCC3-201ENST00000285398 LRPPRCP42704 1394 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms