RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 PRDM15P57071 1507 aaPredicted RBP8.04□□□□□ -1.12
TNFSF4-201ENST00000281834 MAGI2Q86UL8 1455 aa8.04□□□□□ -1.12
TNFSF4-201ENST00000281834 NPATQ14207 1427 aa8.04□□□□□ -1.12
TNFSF4-201ENST00000281834 SRPK2P78362 688 aaKnown RBP8.04□□□□□ -1.12
TNFSF4-201ENST00000281834 CABP2Q9NPB3 220 aa8.04□□□□□ -1.12
TNFSF4-201ENST00000281834 CLTCL1P53675 1640 aa8.04□□□□□ -1.12
TNFSF4-201ENST00000281834 PARD3Q8TEW0 1356 aa8.04□□□□□ -1.12
TNFSF4-201ENST00000281834 ESF1Q9H501 851 aaKnown RBP8.04□□□□□ -1.12
TNFSF4-201ENST00000281834 SCAF11Q99590 1463 aaKnown RBP8.03□□□□□ -1.12
TNFSF4-201ENST00000281834 MINK1Q8N4C8 1332 aaPredicted RBP8.03□□□□□ -1.12
TNFSF4-201ENST00000281834 RCAN3Q9UKA8 241 aa8.03□□□□□ -1.12
TNFSF4-201ENST00000281834 PTPRTO14522 1441 aa8.03□□□□□ -1.12
TNFSF4-201ENST00000281834 AMER1Q5JTC6 1135 aaPredicted RBP8.03□□□□□ -1.12
TNFSF4-201ENST00000281834 POGKQ9P215 609 aa8.02□□□□□ -1.12
TNFSF4-201ENST00000281834 TRPM2O94759 1503 aa8.02□□□□□ -1.13
TNFSF4-201ENST00000281834 CARD14Q9BXL6 1004 aa8.02□□□□□ -1.13
TNFSF4-201ENST00000281834 MORC1Q86VD1 984 aa8.02□□□□□ -1.13
TNFSF4-201ENST00000281834 EXOC6Q8TAG9 804 aa8.02□□□□□ -1.13
TNFSF4-201ENST00000281834 RRP7AQ9Y3A4 280 aaKnown RBP8.02□□□□□ -1.13
TNFSF4-201ENST00000281834 APAF1O14727 1248 aa8.01□□□□□ -1.13
TNFSF4-201ENST00000281834 VGFO15240 615 aaPredicted RBP8.01□□□□□ -1.13
TNFSF4-201ENST00000281834 ARAP3Q8WWN8 1544 aa8.01□□□□□ -1.13
TNFSF4-201ENST00000281834 INO80Q9ULG1 1556 aaPredicted RBP8.01□□□□□ -1.13
TNFSF4-201ENST00000281834 KIDINS220Q9ULH0 1771 aa8.01□□□□□ -1.13
TNFSF4-201ENST00000281834 SMG6Q86US8 1419 aaKnown RBP8□□□□□ -1.13
TNFSF4-201ENST00000281834 PPM1GO15355 546 aaPredicted RBP8□□□□□ -1.13
TNFSF4-201ENST00000281834 STAC3Q96MF2 364 aa7.99□□□□□ -1.13
TNFSF4-201ENST00000281834 C14orf93Q9H972 538 aaKnown RBP7.99□□□□□ -1.13
TNFSF4-201ENST00000281834 EIF2AK4Q9P2K8 1649 aaKnown RBP7.99□□□□□ -1.13
TNFSF4-201ENST00000281834 SPHKAPQ2M3C7 1700 aa7.99□□□□□ -1.13
TNFSF4-201ENST00000281834 LRPPRCP42704 1394 aaKnown RBP7.99□□□□□ -1.13
TNFSF4-201ENST00000281834 RRP1P56182 461 aaKnown RBP7.99□□□□□ -1.13
TNFSF4-201ENST00000281834 TET3O43151 1660 aa7.99□□□□□ -1.13
TNFSF4-201ENST00000281834 SKAP1Q86WV1 359 aa7.99□□□□□ -1.13
TNFSF4-201ENST00000281834 PRAM1Q96QH2 718 aa7.99□□□□□ -1.13
TNFSF4-201ENST00000281834 POLR1AO95602 1720 aaPredicted RBP7.99□□□□□ -1.13
TNFSF4-201ENST00000281834 NUTM2FA1L443 756 aa7.98□□□□□ -1.13
TNFSF4-201ENST00000281834 MADDQ8WXG6 1647 aa7.98□□□□□ -1.13
TNFSF4-201ENST00000281834 GGNBP2Q9H3C7 697 aa7.98□□□□□ -1.13
TNFSF4-201ENST00000281834 EFCAB6Q5THR3 1501 aa7.98□□□□□ -1.13
TNFSF4-201ENST00000281834 CEP152O94986 1710 aa7.98□□□□□ -1.13
TNFSF4-201ENST00000281834 PPRC1Q5VV67 1664 aaKnown RBP7.98□□□□□ -1.13
TNFSF4-201ENST00000281834 MLH3Q9UHC1 1453 aa7.97□□□□□ -1.13
TNFSF4-201ENST00000281834 TSPOAP1O95153 1857 aa7.97□□□□□ -1.13
TNFSF4-201ENST00000281834 U2SURPO15042 1029 aaKnown RBP7.97□□□□□ -1.13
TNFSF4-201ENST00000281834 WAPLQ7Z5K2 1190 aa7.97□□□□□ -1.13
TNFSF4-201ENST00000281834 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.97□□□□□ -1.13
TNFSF4-201ENST00000281834 MROH1Q8NDA8 1641 aa7.97□□□□□ -1.13
TNFSF4-201ENST00000281834 NSD3Q9BZ95 1437 aa7.97□□□□□ -1.13
TNFSF4-201ENST00000281834 FBLN1P23142 703 aa7.97□□□□□ -1.13
TNFSF4-201ENST00000281834 C20orf194Q5TEA3 1177 aa7.97□□□□□ -1.13
TNFSF4-201ENST00000281834 MTHFSP49914 203 aa7.96□□□□□ -1.13
TNFSF4-201ENST00000281834 NPM2Q86SE8 214 aaKnown RBP7.96□□□□□ -1.13
TNFSF4-201ENST00000281834 HECW2Q9P2P5 1572 aa7.96□□□□□ -1.14
TNFSF4-201ENST00000281834 GOLGA2Q08379 1002 aa7.96□□□□□ -1.14
TNFSF4-201ENST00000281834 ERICH6Q7L0X2 663 aa7.96□□□□□ -1.14
TNFSF4-201ENST00000281834 SLC52A1Q9NWF4 448 aa7.96□□□□□ -1.14
TNFSF4-201ENST00000281834 EVC2Q86UK5 1308 aa7.96□□□□□ -1.14
TNFSF4-201ENST00000281834 FRMPD1Q5SYB0 1578 aa7.96□□□□□ -1.14
TNFSF4-201ENST00000281834 RNF17Q9BXT8 1623 aaKnown RBP7.96□□□□□ -1.14
TNFSF4-201ENST00000281834 U2AF1L5P0DN76 240 aaPredicted RBP7.95□□□□□ -1.14
TNFSF4-201ENST00000281834 TRHP20396 242 aaPredicted RBP7.95□□□□□ -1.14
TNFSF4-201ENST00000281834 U2AF1Q01081 240 aaKnown RBP eCLIP7.95□□□□□ -1.14
TNFSF4-201ENST00000281834 ERVK-7P63135 1459 aa7.95□□□□□ -1.14
TNFSF4-201ENST00000281834 PLEKHH1Q9ULM0 1364 aa7.95□□□□□ -1.14
TNFSF4-201ENST00000281834 CRBNQ96SW2 442 aa7.95□□□□□ -1.14
TNFSF4-201ENST00000281834 DNAJC5Q9H3Z4 198 aa7.95□□□□□ -1.14
TNFSF4-201ENST00000281834 SPINK5Q9NQ38 1064 aaPredicted RBP7.95□□□□□ -1.14
TNFSF4-201ENST00000281834 ABCA6Q8N139 1617 aa7.95□□□□□ -1.14
TNFSF4-201ENST00000281834 CANXP27824 592 aaKnown RBP7.95□□□□□ -1.14
TNFSF4-201ENST00000281834 ABCC3O15438 1527 aa7.95□□□□□ -1.14
TNFSF4-201ENST00000281834 CEBPAP49715 358 aaPredicted RBP7.94□□□□□ -1.14
TNFSF4-201ENST00000281834 ERICH6BQ5W0A0 696 aa7.94□□□□□ -1.14
TNFSF4-201ENST00000281834 BCL2L13Q9BXK5 485 aa7.94□□□□□ -1.14
TNFSF4-201ENST00000281834 DMRT2Q9Y5R5 561 aa7.94□□□□□ -1.14
TNFSF4-201ENST00000281834 DEPDC5O75140 1603 aa7.94□□□□□ -1.14
TNFSF4-201ENST00000281834 NEO1Q92859 1461 aa7.94□□□□□ -1.14
TNFSF4-201ENST00000281834 SOX12O15370 315 aa7.94□□□□□ -1.14
TNFSF4-201ENST00000281834 PDE3BQ13370 1112 aa7.94□□□□□ -1.14
TNFSF4-201ENST00000281834 CGNL1Q0VF96 1302 aa7.94□□□□□ -1.14
TNFSF4-201ENST00000281834 VWDEQ8N2E2 1590 aa7.94□□□□□ -1.14
TNFSF4-201ENST00000281834 TXNDC2Q86VQ3 553 aa7.94□□□□□ -1.14
TNFSF4-201ENST00000281834 FRAT1Q92837 279 aaPredicted RBP7.94□□□□□ -1.14
TNFSF4-201ENST00000281834 RPGRIP1LQ68CZ1 1315 aa7.93□□□□□ -1.14
TNFSF4-201ENST00000281834 ASXL1Q8IXJ9 1541 aa7.93□□□□□ -1.14
TNFSF4-201ENST00000281834 SLC24A1O60721 1099 aa7.93□□□□□ -1.14
TNFSF4-201ENST00000281834 CABP1Q9NZU7 370 aa7.93□□□□□ -1.14
TNFSF4-201ENST00000281834 MAP3K4Q9Y6R4 1608 aa7.93□□□□□ -1.14
TNFSF4-201ENST00000281834 MROH2AA6NES4 1674 aa7.93□□□□□ -1.14
TNFSF4-201ENST00000281834 KIF1BO60333 1816 aa7.93□□□□□ -1.14
TNFSF4-201ENST00000281834 PIK3C2GO75747 1445 aa7.92□□□□□ -1.14
TNFSF4-201ENST00000281834 BCAR3O75815 825 aa7.92□□□□□ -1.14
TNFSF4-201ENST00000281834 NCKAP5LQ9HCH0 1330 aa7.92□□□□□ -1.14
TNFSF4-201ENST00000281834 CFAP53Q96M91 514 aa7.92□□□□□ -1.14
TNFSF4-201ENST00000281834 CDK19Q9BWU1 502 aa7.92□□□□□ -1.14
TNFSF4-201ENST00000281834 PLEKHG5O94827 1062 aa7.91□□□□□ -1.14
TNFSF4-201ENST00000281834 DUSP27Q5VZP5 1158 aa7.91□□□□□ -1.14
TNFSF4-201ENST00000281834 MYOM2P54296 1465 aa7.91□□□□□ -1.14
TNFSF4-201ENST00000281834 TCP11L2Q8N4U5 519 aa7.91□□□□□ -1.14
TNFSF4-201ENST00000281834 DIP2CQ9Y2E4 1556 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms