RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 TNRQ92752 1358 aa18.51■□□□□ 0.55
ACER3-201ENST00000278544 RALGAPBQ86X10 1494 aa18.51■□□□□ 0.55
ACER3-201ENST00000278544 ARHGAP31Q2M1Z3 1444 aa18.51■□□□□ 0.55
ACER3-201ENST00000278544 PREX1Q8TCU6 1659 aa18.49■□□□□ 0.55
ACER3-201ENST00000278544 SLC26A8Q96RN1 970 aa18.49■□□□□ 0.55
ACER3-201ENST00000278544 BCORL1Q5H9F3 1711 aa18.48■□□□□ 0.55
ACER3-201ENST00000278544 CCDC7Q96M83 1385 aa18.47■□□□□ 0.55
ACER3-201ENST00000278544 REREQ9P2R6 1566 aa18.47■□□□□ 0.55
ACER3-201ENST00000278544 MYO5BQ9ULV0 1848 aa18.47■□□□□ 0.55
ACER3-201ENST00000278544 TXNDC2Q86VQ3 553 aa18.45■□□□□ 0.54
ACER3-201ENST00000278544 LTKP29376 864 aa18.45■□□□□ 0.54
ACER3-201ENST00000278544 ADGRB3O60242 1522 aa18.44■□□□□ 0.54
ACER3-201ENST00000278544 ZC3H13Q5T200 1668 aaKnown RBP18.44■□□□□ 0.54
ACER3-201ENST00000278544 SENP3-EIF4A1A0A087X0R7 540 aa18.43■□□□□ 0.54
ACER3-201ENST00000278544 C14orf93Q9H972 538 aaKnown RBP18.43■□□□□ 0.54
ACER3-201ENST00000278544 ANP32CO43423 234 aa18.43■□□□□ 0.54
ACER3-201ENST00000278544 DISP3Q9P2K9 1392 aa18.42■□□□□ 0.54
ACER3-201ENST00000278544 PIK3C2BO00750 1634 aa18.42■□□□□ 0.54
ACER3-201ENST00000278544 TRPM1Q7Z4N2 1603 aa18.42■□□□□ 0.54
ACER3-201ENST00000278544 TESK2Q96S53 571 aa18.42■□□□□ 0.54
ACER3-201ENST00000278544 WAPLQ7Z5K2 1190 aa18.41■□□□□ 0.54
ACER3-201ENST00000278544 RIMS2Q9UQ26 1411 aa18.41■□□□□ 0.54
ACER3-201ENST00000278544 MADDQ8WXG6 1647 aa18.41■□□□□ 0.54
ACER3-201ENST00000278544 RBM33Q96EV2 1170 aaKnown RBP18.41■□□□□ 0.54
ACER3-201ENST00000278544 RPGRIP1LQ68CZ1 1315 aa18.41■□□□□ 0.54
ACER3-201ENST00000278544 MINK1Q8N4C8 1332 aaPredicted RBP18.41■□□□□ 0.54
ACER3-201ENST00000278544 POGKQ9P215 609 aa18.4■□□□□ 0.54
ACER3-201ENST00000278544 TMC1Q8TDI8 760 aa18.4■□□□□ 0.54
ACER3-201ENST00000278544 NUTM2FA1L443 756 aa18.4■□□□□ 0.54
ACER3-201ENST00000278544 A2ML1A8K2U0 1454 aa18.39■□□□□ 0.54
ACER3-201ENST00000278544 TMF1P82094 1093 aa18.39■□□□□ 0.53
ACER3-201ENST00000278544 FER1L4A9Z1Z3 1794 aa18.38■□□□□ 0.53
ACER3-201ENST00000278544 PRAM1Q96QH2 718 aa18.37■□□□□ 0.53
ACER3-201ENST00000278544 RIMS1Q86UR5 1692 aaKnown RBP18.37■□□□□ 0.53
ACER3-201ENST00000278544 TMEM131LA2VDJ0 1609 aa18.36■□□□□ 0.53
ACER3-201ENST00000278544 PIK3C2GO75747 1445 aa18.36■□□□□ 0.53
ACER3-201ENST00000278544 NEXMIFQ5QGS0 1516 aa18.36■□□□□ 0.53
ACER3-201ENST00000278544 HSPA2P54652 639 aa18.36■□□□□ 0.53
ACER3-201ENST00000278544 EID1Q9Y6B2 187 aa18.36■□□□□ 0.53
ACER3-201ENST00000278544 SPATA31D1Q6ZQQ2 1576 aa18.35■□□□□ 0.53
ACER3-201ENST00000278544 GPRASP1Q5JY77 1395 aa18.35■□□□□ 0.53
ACER3-201ENST00000278544 CENPJQ9HC77 1338 aaPredicted RBP18.35■□□□□ 0.53
ACER3-201ENST00000278544 CC2D1BQ5T0F9 858 aaKnown RBP18.35■□□□□ 0.53
ACER3-201ENST00000278544 STAC3Q96MF2 364 aa18.34■□□□□ 0.53
ACER3-201ENST00000278544 CABP2Q9NPB3 220 aa18.34■□□□□ 0.53
ACER3-201ENST00000278544 C3P01024 1663 aa18.33■□□□□ 0.53
ACER3-201ENST00000278544 SCAF11Q99590 1463 aaKnown RBP18.33■□□□□ 0.53
ACER3-201ENST00000278544 THEMISQ8N1K5 641 aaPredicted RBP18.33■□□□□ 0.53
ACER3-201ENST00000278544 PANK3Q9H999 370 aa18.33■□□□□ 0.53
ACER3-201ENST00000278544 CCDC184Q52MB2 194 aa18.32■□□□□ 0.52
ACER3-201ENST00000278544 TMEM2Q9UHN6 1383 aa18.32■□□□□ 0.52
ACER3-201ENST00000278544 MYOM2P54296 1465 aa18.32■□□□□ 0.52
ACER3-201ENST00000278544 SRPK2P78362 688 aaKnown RBP18.32■□□□□ 0.52
ACER3-201ENST00000278544 PPLO60437 1756 aa18.31■□□□□ 0.52
ACER3-201ENST00000278544 METP08581 1390 aa18.31■□□□□ 0.52
ACER3-201ENST00000278544 HDGFP51858 240 aaKnown RBP18.3■□□□□ 0.52
ACER3-201ENST00000278544 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.29■□□□□ 0.52
ACER3-201ENST00000278544 SLC12A5Q9H2X9 1139 aa18.28■□□□□ 0.52
ACER3-201ENST00000278544 EIF3AQ14152 1382 aaKnown RBP18.28■□□□□ 0.52
ACER3-201ENST00000278544 PLEKHH1Q9ULM0 1364 aa18.28■□□□□ 0.52
ACER3-201ENST00000278544 NCKAP5LQ9HCH0 1330 aa18.26■□□□□ 0.51
ACER3-201ENST00000278544 KDM4FA0A1W2PPD8 638 aa18.26■□□□□ 0.51
ACER3-201ENST00000278544 IFT172Q9UG01 1749 aa18.26■□□□□ 0.51
ACER3-201ENST00000278544 TNNT2P45379 298 aaPredicted RBP18.26■□□□□ 0.51
ACER3-201ENST00000278544 FAM9BQ8IZU0 186 aa18.24■□□□□ 0.51
ACER3-201ENST00000278544 NRXN1Q9ULB1 1477 aa18.24■□□□□ 0.51
ACER3-201ENST00000278544 PRKRIP1Q9H875 184 aaPredicted RBP18.24■□□□□ 0.51
ACER3-201ENST00000278544 YTHDC2Q9H6S0 1430 aaKnown RBP18.24■□□□□ 0.51
ACER3-201ENST00000278544 ZFYVE9O95405 1425 aa18.23■□□□□ 0.51
ACER3-201ENST00000278544 PTPRMP28827 1452 aa18.22■□□□□ 0.51
ACER3-201ENST00000278544 ANKLE2Q86XL3 938 aa18.22■□□□□ 0.51
ACER3-201ENST00000278544 AMOTL2Q9Y2J4 779 aa18.22■□□□□ 0.51
ACER3-201ENST00000278544 ALKQ9UM73 1620 aa18.21■□□□□ 0.51
ACER3-201ENST00000278544 MRS2Q9HD23 443 aa18.21■□□□□ 0.51
ACER3-201ENST00000278544 ADGRB1O14514 1584 aa18.21■□□□□ 0.51
ACER3-201ENST00000278544 ASXL1Q8IXJ9 1541 aa18.2■□□□□ 0.5
ACER3-201ENST00000278544 PLEKHG5O94827 1062 aa18.2■□□□□ 0.5
ACER3-201ENST00000278544 NLRP1Q9C000 1473 aa18.2■□□□□ 0.5
ACER3-201ENST00000278544 KNSTRNQ9Y448 316 aa18.19■□□□□ 0.5
ACER3-201ENST00000278544 UBR1Q8IWV7 1749 aa18.19■□□□□ 0.5
ACER3-201ENST00000278544 CDK19Q9BWU1 502 aa18.19■□□□□ 0.5
ACER3-201ENST00000278544 CDCA8Q53HL2 280 aa18.17■□□□□ 0.5
ACER3-201ENST00000278544 EVC2Q86UK5 1308 aa18.17■□□□□ 0.5
ACER3-201ENST00000278544 KCNA6P17658 529 aa18.17■□□□□ 0.5
ACER3-201ENST00000278544 C14orf37Q86TY3 774 aa18.17■□□□□ 0.5
ACER3-201ENST00000278544 IQGAP1P46940 1657 aa18.17■□□□□ 0.5
ACER3-201ENST00000278544 NEURL4Q96JN8 1562 aa18.16■□□□□ 0.5
ACER3-201ENST00000278544 ADAMTSL3P82987 1691 aa18.16■□□□□ 0.5
ACER3-201ENST00000278544 CABP1Q9NZU7 370 aa18.15■□□□□ 0.5
ACER3-201ENST00000278544 CARD14Q9BXL6 1004 aa18.14■□□□□ 0.49
ACER3-201ENST00000278544 ROBO2Q9HCK4 1378 aa18.14■□□□□ 0.49
ACER3-201ENST00000278544 ADAMTS13Q76LX8 1427 aa18.14■□□□□ 0.49
ACER3-201ENST00000278544 PER1O15534 1290 aaPredicted RBP18.14■□□□□ 0.49
ACER3-201ENST00000278544 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.13■□□□□ 0.49
ACER3-201ENST00000278544 MYO3AQ8NEV4 1616 aa18.13■□□□□ 0.49
ACER3-201ENST00000278544 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
ACER3-201ENST00000278544 SALL2Q9Y467 1007 aaPredicted RBP18.12■□□□□ 0.49
ACER3-201ENST00000278544 PLEKHG1Q9ULL1 1385 aa18.11■□□□□ 0.49
ACER3-201ENST00000278544 LRPPRCP42704 1394 aaKnown RBP18.1■□□□□ 0.49
ACER3-201ENST00000278544 PMFBP1Q8TBY8 1022 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms