RNA–Protein interactions for RNA: ENST00000276925.6

CDKN2B-201, Transcript of cyclin dependent kinase inhibitor 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2B, Length 3,911 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2B-201ENST00000276925 SLKQ9H2G2 1235 aaPredicted RBP16.39■□□□□ 0.21
CDKN2B-201ENST00000276925 ADGBQ8N7X0 1667 aa16.37■□□□□ 0.21
CDKN2B-201ENST00000276925 U2SURPO15042 1029 aaKnown RBP16.37■□□□□ 0.21
CDKN2B-201ENST00000276925 SLC24A1O60721 1099 aa16.37■□□□□ 0.21
CDKN2B-201ENST00000276925 SCAPERQ9BY12 1400 aa16.35■□□□□ 0.21
CDKN2B-201ENST00000276925 SAMD9LQ8IVG5 1584 aa16.35■□□□□ 0.21
CDKN2B-201ENST00000276925 CARD14Q9BXL6 1004 aa16.35■□□□□ 0.21
CDKN2B-201ENST00000276925 MAGI2Q86UL8 1455 aa16.35■□□□□ 0.21
CDKN2B-201ENST00000276925 IGHDP01880 384 aa16.34■□□□□ 0.21
CDKN2B-201ENST00000276925 ARHGEF12Q9NZN5 1544 aa16.34■□□□□ 0.21
CDKN2B-201ENST00000276925 SLFN5Q08AF3 891 aa16.34■□□□□ 0.21
CDKN2B-201ENST00000276925 U2AF1L5P0DN76 240 aaPredicted RBP16.33■□□□□ 0.21
CDKN2B-201ENST00000276925 U2AF1Q01081 240 aaKnown RBP eCLIP16.33■□□□□ 0.21
CDKN2B-201ENST00000276925 ABCA8O94911 1581 aa16.33■□□□□ 0.2
CDKN2B-201ENST00000276925 ERCC6L2Q5T890 1561 aa16.33■□□□□ 0.2
CDKN2B-201ENST00000276925 MS4A1P11836 297 aa16.33■□□□□ 0.2
CDKN2B-201ENST00000276925 CENPQQ7L2Z9 268 aaPredicted RBP16.33■□□□□ 0.2
CDKN2B-201ENST00000276925 COL17A1Q9UMD9 1497 aaPredicted RBP16.33■□□□□ 0.2
CDKN2B-201ENST00000276925 KDM5DQ9BY66 1539 aa16.32■□□□□ 0.2
CDKN2B-201ENST00000276925 NFKBIBQ15653 356 aa16.32■□□□□ 0.2
CDKN2B-201ENST00000276925 BRPF3Q9ULD4 1205 aa16.32■□□□□ 0.2
CDKN2B-201ENST00000276925 SHANK2Q9UPX8 1470 aa16.32■□□□□ 0.2
CDKN2B-201ENST00000276925 FAM161AQ3B820 660 aa16.31■□□□□ 0.2
CDKN2B-201ENST00000276925 CENPJQ9HC77 1338 aaPredicted RBP16.31■□□□□ 0.2
CDKN2B-201ENST00000276925 UPF2Q9HAU5 1272 aaKnown RBP16.31■□□□□ 0.2
CDKN2B-201ENST00000276925 FRAT2O75474 233 aaPredicted RBP16.3■□□□□ 0.2
CDKN2B-201ENST00000276925 MTHFSP49914 203 aa16.3■□□□□ 0.2
CDKN2B-201ENST00000276925 CABP2Q9NPB3 220 aa16.29■□□□□ 0.2
CDKN2B-201ENST00000276925 WASHC2CQ9Y4E1 1318 aa16.29■□□□□ 0.2
CDKN2B-201ENST00000276925 TTC37Q6PGP7 1564 aa16.29■□□□□ 0.2
CDKN2B-201ENST00000276925 TCP11L2Q8N4U5 519 aa16.29■□□□□ 0.2
CDKN2B-201ENST00000276925 KANK1Q14678 1352 aa16.29■□□□□ 0.2
CDKN2B-201ENST00000276925 SEC24BO95487 1268 aa16.28■□□□□ 0.2
CDKN2B-201ENST00000276925 TSR2Q969E8 191 aaKnown RBP16.28■□□□□ 0.2
CDKN2B-201ENST00000276925 FBLN1P23142 703 aa16.27■□□□□ 0.2
CDKN2B-201ENST00000276925 SRPK2P78362 688 aaKnown RBP16.27■□□□□ 0.2
CDKN2B-201ENST00000276925 CROCC2H7BZ55 1655 aa16.27■□□□□ 0.19
CDKN2B-201ENST00000276925 USP35Q9P2H5 1018 aa16.26■□□□□ 0.19
CDKN2B-201ENST00000276925 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.26■□□□□ 0.19
CDKN2B-201ENST00000276925 E9PSI1 815 aa16.26■□□□□ 0.19
CDKN2B-201ENST00000276925 C8orf34Q49A92 452 aa16.26■□□□□ 0.19
CDKN2B-201ENST00000276925 GGNBP2Q9H3C7 697 aa16.26■□□□□ 0.19
CDKN2B-201ENST00000276925 WWC1Q8IX03 1113 aa16.26■□□□□ 0.19
CDKN2B-201ENST00000276925 GPRASP1Q5JY77 1395 aa16.25■□□□□ 0.19
CDKN2B-201ENST00000276925 GSE1Q14687 1217 aa16.25■□□□□ 0.19
CDKN2B-201ENST00000276925 NPM1P06748 294 aaKnown RBP eCLIP16.25■□□□□ 0.19
CDKN2B-201ENST00000276925 FTSJ3Q8IY81 847 aaKnown RBP16.24■□□□□ 0.19
CDKN2B-201ENST00000276925 UGGT1Q9NYU2 1555 aa16.23■□□□□ 0.19
CDKN2B-201ENST00000276925 RLBP1P12271 317 aa16.23■□□□□ 0.19
CDKN2B-201ENST00000276925 POLR1AO95602 1720 aaPredicted RBP16.23■□□□□ 0.19
CDKN2B-201ENST00000276925 BECN1Q14457 450 aa16.22■□□□□ 0.19
CDKN2B-201ENST00000276925 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
CDKN2B-201ENST00000276925 KDM2BQ8NHM5 1336 aa16.22■□□□□ 0.19
CDKN2B-201ENST00000276925 RAPGEF3O95398 923 aa16.22■□□□□ 0.19
CDKN2B-201ENST00000276925 MINK1Q8N4C8 1332 aaPredicted RBP16.22■□□□□ 0.19
CDKN2B-201ENST00000276925 CDC42BPBQ9Y5S2 1711 aa16.22■□□□□ 0.19
CDKN2B-201ENST00000276925 ELL2O00472 640 aaPredicted RBP16.22■□□□□ 0.19
CDKN2B-201ENST00000276925 WDR7Q9Y4E6 1490 aa16.22■□□□□ 0.19
CDKN2B-201ENST00000276925 BLMP54132 1417 aaPredicted RBP16.22■□□□□ 0.19
CDKN2B-201ENST00000276925 EIF3AQ14152 1382 aaKnown RBP16.21■□□□□ 0.19
CDKN2B-201ENST00000276925 ADCY10Q96PN6 1610 aa16.21■□□□□ 0.19
CDKN2B-201ENST00000276925 CFAP65Q6ZU64 1925 aaKnown RBP16.21■□□□□ 0.18
CDKN2B-201ENST00000276925 GZF1Q9H116 711 aaPredicted RBP16.2■□□□□ 0.18
CDKN2B-201ENST00000276925 STAG3Q9UJ98 1225 aa16.2■□□□□ 0.18
CDKN2B-201ENST00000276925 TRPM1Q7Z4N2 1603 aa16.2■□□□□ 0.18
CDKN2B-201ENST00000276925 PLCH2O75038 1416 aa16.2■□□□□ 0.18
CDKN2B-201ENST00000276925 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.19■□□□□ 0.18
CDKN2B-201ENST00000276925 CFAP53Q96M91 514 aa16.19■□□□□ 0.18
CDKN2B-201ENST00000276925 NSD3Q9BZ95 1437 aa16.19■□□□□ 0.18
CDKN2B-201ENST00000276925 SCAF11Q99590 1463 aaKnown RBP16.19■□□□□ 0.18
CDKN2B-201ENST00000276925 ITPRIPQ8IWB1 547 aa16.18■□□□□ 0.18
CDKN2B-201ENST00000276925 PCDHB15Q9Y5E8 787 aa16.18■□□□□ 0.18
CDKN2B-201ENST00000276925 MLECQ14165 292 aa16.18■□□□□ 0.18
CDKN2B-201ENST00000276925 MFAP1P55081 439 aaKnown RBP16.18■□□□□ 0.18
CDKN2B-201ENST00000276925 SMC4Q9NTJ3 1288 aa16.18■□□□□ 0.18
CDKN2B-201ENST00000276925 HSP90AA1P07900 732 aaKnown RBP16.17■□□□□ 0.18
CDKN2B-201ENST00000276925 POGKQ9P215 609 aa16.17■□□□□ 0.18
CDKN2B-201ENST00000276925 ARHGEF5Q12774 1597 aa16.17■□□□□ 0.18
CDKN2B-201ENST00000276925 ZNF521Q96K83 1311 aa16.16■□□□□ 0.18
CDKN2B-201ENST00000276925 RUNDC1Q96C34 613 aa16.16■□□□□ 0.18
CDKN2B-201ENST00000276925 NOS1P29475 1434 aa16.16■□□□□ 0.18
CDKN2B-201ENST00000276925 ZMYM4Q5VZL5 1548 aa16.16■□□□□ 0.18
CDKN2B-201ENST00000276925 PDZRN3Q9UPQ7 1066 aa16.15■□□□□ 0.18
CDKN2B-201ENST00000276925 DUOX2Q9NRD8 1548 aa16.15■□□□□ 0.18
CDKN2B-201ENST00000276925 SOX12O15370 315 aa16.15■□□□□ 0.18
CDKN2B-201ENST00000276925 RARSP54136 660 aaKnown RBP16.14■□□□□ 0.17
CDKN2B-201ENST00000276925 PRDM15P57071 1507 aaPredicted RBP16.14■□□□□ 0.17
CDKN2B-201ENST00000276925 EXOSC9Q06265 439 aaKnown RBP16.13■□□□□ 0.17
CDKN2B-201ENST00000276925 ATP10AO60312 1499 aa16.13■□□□□ 0.17
CDKN2B-201ENST00000276925 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
CDKN2B-201ENST00000276925 PREX2Q70Z35 1606 aa16.13■□□□□ 0.17
CDKN2B-201ENST00000276925 ASXL1Q8IXJ9 1541 aa16.13■□□□□ 0.17
CDKN2B-201ENST00000276925 NKTRP30414 1462 aaKnown RBP16.13■□□□□ 0.17
CDKN2B-201ENST00000276925 MAPK8IP3Q9UPT6 1336 aa16.13■□□□□ 0.17
CDKN2B-201ENST00000276925 THUMPD2Q9BTF0 503 aaKnown RBP16.13■□□□□ 0.17
CDKN2B-201ENST00000276925 CGNL1Q0VF96 1302 aa16.12■□□□□ 0.17
CDKN2B-201ENST00000276925 NUTM2FA1L443 756 aa16.12■□□□□ 0.17
CDKN2B-201ENST00000276925 HMOX1P09601 288 aa16.11■□□□□ 0.17
CDKN2B-201ENST00000276925 NAP1L5Q96NT1 182 aaPredicted RBP16.11■□□□□ 0.17
CDKN2B-201ENST00000276925 FANCAO15360 1455 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms