RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ROCK2O75116 1388 aaKnown RBP16.36■□□□□ 0.21
HERC6-202ENST00000273960 FAM13BQ9NYF5 915 aa16.36■□□□□ 0.21
HERC6-202ENST00000273960 APAF1O14727 1248 aa16.35■□□□□ 0.21
HERC6-202ENST00000273960 GRPEL1Q9HAV7 217 aa16.34■□□□□ 0.21
HERC6-202ENST00000273960 ROCK1Q13464 1354 aa16.34■□□□□ 0.21
HERC6-202ENST00000273960 PLEKHH1Q9ULM0 1364 aa16.34■□□□□ 0.21
HERC6-202ENST00000273960 ARHGAP5Q13017 1502 aa16.33■□□□□ 0.21
HERC6-202ENST00000273960 KIF3BO15066 747 aa16.33■□□□□ 0.2
HERC6-202ENST00000273960 KIAA1211Q6ZU35 1233 aa16.33■□□□□ 0.2
HERC6-202ENST00000273960 TNNQ9UQP3 1299 aa16.33■□□□□ 0.2
HERC6-202ENST00000273960 SPAG9O60271 1321 aaKnown RBP16.32■□□□□ 0.2
HERC6-202ENST00000273960 PRDM10Q9NQV6 1147 aa16.31■□□□□ 0.2
HERC6-202ENST00000273960 ANTXR1Q9H6X2 564 aa16.31■□□□□ 0.2
HERC6-202ENST00000273960 GGT6Q6P531 493 aa16.31■□□□□ 0.2
HERC6-202ENST00000273960 RRP7AQ9Y3A4 280 aaKnown RBP16.3■□□□□ 0.2
HERC6-202ENST00000273960 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
HERC6-202ENST00000273960 KIAA1107Q9UPP5 1409 aa16.3■□□□□ 0.2
HERC6-202ENST00000273960 MRE11P49959 708 aa16.29■□□□□ 0.2
HERC6-202ENST00000273960 PER1O15534 1290 aaPredicted RBP16.28■□□□□ 0.2
HERC6-202ENST00000273960 TNNT2P45379 298 aaPredicted RBP16.28■□□□□ 0.2
HERC6-202ENST00000273960 GAS2L3Q86XJ1 694 aa16.28■□□□□ 0.2
HERC6-202ENST00000273960 NCLP19338 710 aaKnown RBP16.27■□□□□ 0.2
HERC6-202ENST00000273960 KNSTRNQ9Y448 316 aa16.27■□□□□ 0.19
HERC6-202ENST00000273960 FSD2A1L4K1 749 aa16.26■□□□□ 0.19
HERC6-202ENST00000273960 NUTM2DQ5VT03 806 aaPredicted RBP16.26■□□□□ 0.19
HERC6-202ENST00000273960 PDZRN3Q9UPQ7 1066 aa16.26■□□□□ 0.19
HERC6-202ENST00000273960 R3HCC1Q9Y3T6 440 aaKnown RBP16.26■□□□□ 0.19
HERC6-202ENST00000273960 CCDC144AA2RUR9 1427 aa16.26■□□□□ 0.19
HERC6-202ENST00000273960 ERCC6L2Q5T890 1561 aa16.25■□□□□ 0.19
HERC6-202ENST00000273960 ZHX1Q9UKY1 873 aaPredicted RBP16.25■□□□□ 0.19
HERC6-202ENST00000273960 RSPH4AQ5TD94 716 aa16.24■□□□□ 0.19
HERC6-202ENST00000273960 PARD3Q8TEW0 1356 aa16.24■□□□□ 0.19
HERC6-202ENST00000273960 CHMP5Q9NZZ3 219 aa16.23■□□□□ 0.19
HERC6-202ENST00000273960 SLFN5Q08AF3 891 aa16.23■□□□□ 0.19
HERC6-202ENST00000273960 DNMT1P26358 1616 aaKnown RBP16.23■□□□□ 0.19
HERC6-202ENST00000273960 PZPP20742 1482 aa16.23■□□□□ 0.19
HERC6-202ENST00000273960 TBC1D32Q96NH3 1257 aa16.22■□□□□ 0.19
HERC6-202ENST00000273960 PCDHB15Q9Y5E8 787 aa16.22■□□□□ 0.19
HERC6-202ENST00000273960 PPP2R1AP30153 589 aa16.22■□□□□ 0.19
HERC6-202ENST00000273960 C22orf23Q9BZE7 217 aa16.22■□□□□ 0.19
HERC6-202ENST00000273960 CYB5RLQ6IPT4 315 aa16.21■□□□□ 0.19
HERC6-202ENST00000273960 HSCBQ8IWL3 235 aa16.21■□□□□ 0.19
HERC6-202ENST00000273960 OSCARQ8IYS5 282 aa16.21■□□□□ 0.19
HERC6-202ENST00000273960 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.19
HERC6-202ENST00000273960 DISP3Q9P2K9 1392 aa16.2■□□□□ 0.18
HERC6-202ENST00000273960 MAPK8IP3Q9UPT6 1336 aa16.2■□□□□ 0.18
HERC6-202ENST00000273960 PLEKHH2Q8IVE3 1493 aa16.2■□□□□ 0.18
HERC6-202ENST00000273960 MSNP26038 577 aaKnown RBP16.2■□□□□ 0.18
HERC6-202ENST00000273960 MPNDQ8N594 471 aa16.2■□□□□ 0.18
HERC6-202ENST00000273960 PDCL3Q9H2J4 239 aa16.2■□□□□ 0.18
HERC6-202ENST00000273960 HSP90AB1P08238 724 aaKnown RBP16.19■□□□□ 0.18
HERC6-202ENST00000273960 CENPJQ9HC77 1338 aaPredicted RBP16.19■□□□□ 0.18
HERC6-202ENST00000273960 CCDC141Q6ZP82 1450 aa16.18■□□□□ 0.18
HERC6-202ENST00000273960 RLBP1P12271 317 aa16.18■□□□□ 0.18
HERC6-202ENST00000273960 AMER1Q5JTC6 1135 aaPredicted RBP16.18■□□□□ 0.18
HERC6-202ENST00000273960 SYCP2Q9BX26 1530 aa16.18■□□□□ 0.18
HERC6-202ENST00000273960 TPRNQ4KMQ1 711 aa16.18■□□□□ 0.18
HERC6-202ENST00000273960 ANP32BQ92688 251 aaKnown RBP16.17■□□□□ 0.18
HERC6-202ENST00000273960 XPCQ01831 940 aaPredicted RBP16.17■□□□□ 0.18
HERC6-202ENST00000273960 TMF1P82094 1093 aa16.16■□□□□ 0.18
HERC6-202ENST00000273960 SCAPERQ9BY12 1400 aa16.16■□□□□ 0.18
HERC6-202ENST00000273960 SAFB2Q14151 953 aaKnown RBP eCLIP16.15■□□□□ 0.18
HERC6-202ENST00000273960 TNPO1Q92973 898 aaKnown RBP16.15■□□□□ 0.18
HERC6-202ENST00000273960 GCC2Q8IWJ2 1684 aa16.15■□□□□ 0.18
HERC6-202ENST00000273960 KDM5CP41229 1560 aa16.15■□□□□ 0.18
HERC6-202ENST00000273960 TPM2P07951 284 aa16.15■□□□□ 0.18
HERC6-202ENST00000273960 ABCA8O94911 1581 aa16.15■□□□□ 0.18
HERC6-202ENST00000273960 NASPP49321 788 aaPredicted RBP16.14■□□□□ 0.17
HERC6-202ENST00000273960 CGNL1Q0VF96 1302 aa16.14■□□□□ 0.17
HERC6-202ENST00000273960 ABCC10Q5T3U5 1492 aa16.14■□□□□ 0.17
HERC6-202ENST00000273960 CHD1O14646 1710 aa16.14■□□□□ 0.17
HERC6-202ENST00000273960 ITSN2Q9NZM3 1697 aa16.13■□□□□ 0.17
HERC6-202ENST00000273960 DDX11L8A8MPP1 907 aa16.13■□□□□ 0.17
HERC6-202ENST00000273960 MLECQ14165 292 aa16.13■□□□□ 0.17
HERC6-202ENST00000273960 TRAPPC8Q9Y2L5 1435 aa16.12■□□□□ 0.17
HERC6-202ENST00000273960 RAPGEF3O95398 923 aa16.12■□□□□ 0.17
HERC6-202ENST00000273960 RIPK4P57078 832 aa16.11■□□□□ 0.17
HERC6-202ENST00000273960 JARID2Q92833 1246 aaPredicted RBP16.11■□□□□ 0.17
HERC6-202ENST00000273960 DDX49Q9Y6V7 483 aaKnown RBP16.11■□□□□ 0.17
HERC6-202ENST00000273960 FOXD4L5Q5VV16 416 aaPredicted RBP16.11■□□□□ 0.17
HERC6-202ENST00000273960 FOXD4L4Q8WXT5 416 aaPredicted RBP16.11■□□□□ 0.17
HERC6-202ENST00000273960 BLMP54132 1417 aaPredicted RBP16.11■□□□□ 0.17
HERC6-202ENST00000273960 FTSJ3Q8IY81 847 aaKnown RBP16.1■□□□□ 0.17
HERC6-202ENST00000273960 UQCRHLA0A096LP55 91 aa16.09■□□□□ 0.17
HERC6-202ENST00000273960 E9PSI1 815 aa16.09■□□□□ 0.17
HERC6-202ENST00000273960 UQCRHP07919 91 aa16.09■□□□□ 0.17
HERC6-202ENST00000273960 TSC1Q92574 1164 aa16.09■□□□□ 0.17
HERC6-202ENST00000273960 RBM42Q9BTD8 480 aaKnown RBP16.09■□□□□ 0.17
HERC6-202ENST00000273960 PMFBP1Q8TBY8 1022 aa16.09■□□□□ 0.17
HERC6-202ENST00000273960 ZMYM4Q5VZL5 1548 aa16.09■□□□□ 0.17
HERC6-202ENST00000273960 TESK2Q96S53 571 aa16.09■□□□□ 0.17
HERC6-202ENST00000273960 MBD5Q9P267 1494 aa16.08■□□□□ 0.17
HERC6-202ENST00000273960 RWDD1Q9H446 243 aaPredicted RBP16.08■□□□□ 0.16
HERC6-202ENST00000273960 EIF3AQ14152 1382 aaKnown RBP16.08■□□□□ 0.16
HERC6-202ENST00000273960 FAM177BA6PVY3 158 aa16.08■□□□□ 0.16
HERC6-202ENST00000273960 SSFA2P28290 1259 aa16.08■□□□□ 0.16
HERC6-202ENST00000273960 KANK1Q14678 1352 aa16.08■□□□□ 0.16
HERC6-202ENST00000273960 PRDM4Q9UKN5 801 aa16.07■□□□□ 0.16
HERC6-202ENST00000273960 RALGAPBQ86X10 1494 aa16.07■□□□□ 0.16
HERC6-202ENST00000273960 ZSCAN30Q86W11 494 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms