RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 CENPQQ7L2Z9 268 aaPredicted RBP18.54■□□□□ 0.56
CNOT9-201ENST00000273064 UGGT2Q9NYU1 1516 aa18.54■□□□□ 0.56
CNOT9-201ENST00000273064 HSP90AB1P08238 724 aaKnown RBP18.53■□□□□ 0.56
CNOT9-201ENST00000273064 FBLN1P23142 703 aa18.52■□□□□ 0.55
CNOT9-201ENST00000273064 NUTM2GQ5VZR2 741 aa18.52■□□□□ 0.55
CNOT9-201ENST00000273064 NGDNQ8NEJ9 315 aaKnown RBP18.52■□□□□ 0.55
CNOT9-201ENST00000273064 PRAM1Q96QH2 718 aa18.52■□□□□ 0.55
CNOT9-201ENST00000273064 DISP3Q9P2K9 1392 aa18.51■□□□□ 0.55
CNOT9-201ENST00000273064 ERBINQ96RT1 1412 aa18.51■□□□□ 0.55
CNOT9-201ENST00000273064 FAM161AQ3B820 660 aa18.51■□□□□ 0.55
CNOT9-201ENST00000273064 ATP10BO94823 1461 aa18.5■□□□□ 0.55
CNOT9-201ENST00000273064 IPO8O15397 1037 aaKnown RBP18.5■□□□□ 0.55
CNOT9-201ENST00000273064 RTF1Q92541 710 aaKnown RBP18.5■□□□□ 0.55
CNOT9-201ENST00000273064 MS4A1P11836 297 aa18.49■□□□□ 0.55
CNOT9-201ENST00000273064 RUNDC1Q96C34 613 aa18.49■□□□□ 0.55
CNOT9-201ENST00000273064 PNNQ9H307 717 aaKnown RBP18.48■□□□□ 0.55
CNOT9-201ENST00000273064 ANP32BQ92688 251 aaKnown RBP18.48■□□□□ 0.55
CNOT9-201ENST00000273064 MAGI3Q5TCQ9 1506 aa18.48■□□□□ 0.55
CNOT9-201ENST00000273064 DIAPH1O60610 1272 aaKnown RBP18.48■□□□□ 0.55
CNOT9-201ENST00000273064 ZKSCAN2Q63HK3 967 aa18.47■□□□□ 0.55
CNOT9-201ENST00000273064 ANKRD45Q5TZF3 282 aa18.47■□□□□ 0.55
CNOT9-201ENST00000273064 PMFBP1Q8TBY8 1022 aa18.46■□□□□ 0.55
CNOT9-201ENST00000273064 TXNDC2Q86VQ3 553 aa18.46■□□□□ 0.55
CNOT9-201ENST00000273064 LNPKQ9C0E8 428 aa18.46■□□□□ 0.55
CNOT9-201ENST00000273064 CABP1Q9NZU7 370 aa18.46■□□□□ 0.55
CNOT9-201ENST00000273064 CCDC141Q6ZP82 1450 aa18.46■□□□□ 0.55
CNOT9-201ENST00000273064 SMG6Q86US8 1419 aaKnown RBP18.46■□□□□ 0.55
CNOT9-201ENST00000273064 NOL8Q76FK4 1167 aaKnown RBP18.45■□□□□ 0.54
CNOT9-201ENST00000273064 EXOSC9Q06265 439 aaKnown RBP18.45■□□□□ 0.54
CNOT9-201ENST00000273064 HSCBQ8IWL3 235 aa18.45■□□□□ 0.54
CNOT9-201ENST00000273064 OS9Q13438 667 aaPredicted RBP18.44■□□□□ 0.54
CNOT9-201ENST00000273064 THUMPD2Q9BTF0 503 aaKnown RBP18.44■□□□□ 0.54
CNOT9-201ENST00000273064 AMPHP49418 695 aa18.44■□□□□ 0.54
CNOT9-201ENST00000273064 HAP1P54257 671 aaPredicted RBP18.44■□□□□ 0.54
CNOT9-201ENST00000273064 ZNF428Q96B54 188 aa18.44■□□□□ 0.54
CNOT9-201ENST00000273064 FBXO31Q5XUX0 539 aaPredicted RBP18.44■□□□□ 0.54
CNOT9-201ENST00000273064 HDGFP51858 240 aaKnown RBP18.43■□□□□ 0.54
CNOT9-201ENST00000273064 DZIP1LQ8IYY4 767 aaKnown RBP18.43■□□□□ 0.54
CNOT9-201ENST00000273064 C1orf115Q9H7X2 142 aa18.43■□□□□ 0.54
CNOT9-201ENST00000273064 WAPLQ7Z5K2 1190 aa18.42■□□□□ 0.54
CNOT9-201ENST00000273064 COG3Q96JB2 828 aa18.42■□□□□ 0.54
CNOT9-201ENST00000273064 FOXD4L5Q5VV16 416 aaPredicted RBP18.41■□□□□ 0.54
CNOT9-201ENST00000273064 FOXD4L4Q8WXT5 416 aaPredicted RBP18.41■□□□□ 0.54
CNOT9-201ENST00000273064 PRKAR2BP31323 418 aa18.4■□□□□ 0.54
CNOT9-201ENST00000273064 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.4■□□□□ 0.54
CNOT9-201ENST00000273064 BACH2Q9BYV9 841 aa18.39■□□□□ 0.53
CNOT9-201ENST00000273064 KIF21AQ7Z4S6 1674 aa18.39■□□□□ 0.53
CNOT9-201ENST00000273064 TESK2Q96S53 571 aa18.38■□□□□ 0.53
CNOT9-201ENST00000273064 SLC26A8Q96RN1 970 aa18.38■□□□□ 0.53
CNOT9-201ENST00000273064 CTTNBP2Q8WZ74 1663 aa18.37■□□□□ 0.53
CNOT9-201ENST00000273064 IDI1Q13907 227 aa18.37■□□□□ 0.53
CNOT9-201ENST00000273064 WWC1Q8IX03 1113 aa18.37■□□□□ 0.53
CNOT9-201ENST00000273064 RRS1Q15050 365 aaKnown RBP18.37■□□□□ 0.53
CNOT9-201ENST00000273064 FOXD4L6Q3SYB3 417 aaPredicted RBP18.36■□□□□ 0.53
CNOT9-201ENST00000273064 FOXD4L3Q6VB84 417 aaPredicted RBP18.36■□□□□ 0.53
CNOT9-201ENST00000273064 DISP1Q96F81 1524 aa18.36■□□□□ 0.53
CNOT9-201ENST00000273064 CDK19Q9BWU1 502 aa18.36■□□□□ 0.53
CNOT9-201ENST00000273064 ZNF330Q9Y3S2 320 aaPredicted RBP18.35■□□□□ 0.53
CNOT9-201ENST00000273064 SLFN5Q08AF3 891 aa18.35■□□□□ 0.53
CNOT9-201ENST00000273064 CFAP43Q8NDM7 1665 aa18.35■□□□□ 0.53
CNOT9-201ENST00000273064 PLCB2Q00722 1185 aa18.35■□□□□ 0.53
CNOT9-201ENST00000273064 KDM6BO15054 1643 aa18.35■□□□□ 0.53
CNOT9-201ENST00000273064 GOLGA6L22H0YM25 854 aa18.34■□□□□ 0.53
CNOT9-201ENST00000273064 CASC1Q6TDU7 716 aa18.34■□□□□ 0.53
CNOT9-201ENST00000273064 TRIM44Q96DX7 344 aaPredicted RBP18.34■□□□□ 0.53
CNOT9-201ENST00000273064 RAPGEF6Q8TEU7 1601 aa18.34■□□□□ 0.53
CNOT9-201ENST00000273064 DUSP27Q5VZP5 1158 aa18.33■□□□□ 0.53
CNOT9-201ENST00000273064 WDR62O43379 1518 aa18.33■□□□□ 0.52
CNOT9-201ENST00000273064 PZPP20742 1482 aa18.33■□□□□ 0.52
CNOT9-201ENST00000273064 RBM33Q96EV2 1170 aaKnown RBP18.33■□□□□ 0.52
CNOT9-201ENST00000273064 PDZRN3Q9UPQ7 1066 aa18.33■□□□□ 0.52
CNOT9-201ENST00000273064 EID1Q9Y6B2 187 aa18.33■□□□□ 0.52
CNOT9-201ENST00000273064 NSD3Q9BZ95 1437 aa18.32■□□□□ 0.52
CNOT9-201ENST00000273064 TRIM6-TRIM34B2RNG4 842 aa18.32■□□□□ 0.52
CNOT9-201ENST00000273064 EIF2S2P20042 333 aaKnown RBP18.32■□□□□ 0.52
CNOT9-201ENST00000273064 KIF14Q15058 1648 aa18.32■□□□□ 0.52
CNOT9-201ENST00000273064 PER1O15534 1290 aaPredicted RBP18.31■□□□□ 0.52
CNOT9-201ENST00000273064 DCTN1Q14203 1278 aa18.31■□□□□ 0.52
CNOT9-201ENST00000273064 DHX29Q7Z478 1369 aaKnown RBP18.31■□□□□ 0.52
CNOT9-201ENST00000273064 TRAPPC8Q9Y2L5 1435 aa18.31■□□□□ 0.52
CNOT9-201ENST00000273064 KCNJ4P48050 445 aa18.31■□□□□ 0.52
CNOT9-201ENST00000273064 NFKBIBQ15653 356 aa18.31■□□□□ 0.52
CNOT9-201ENST00000273064 STK31Q9BXU1 1019 aa18.31■□□□□ 0.52
CNOT9-201ENST00000273064 TNNQ9UQP3 1299 aa18.31■□□□□ 0.52
CNOT9-201ENST00000273064 FRAT2O75474 233 aaPredicted RBP18.3■□□□□ 0.52
CNOT9-201ENST00000273064 SPINK5Q9NQ38 1064 aaPredicted RBP18.3■□□□□ 0.52
CNOT9-201ENST00000273064 AMER1Q5JTC6 1135 aaPredicted RBP18.3■□□□□ 0.52
CNOT9-201ENST00000273064 NOB1Q9ULX3 412 aaKnown RBP18.3■□□□□ 0.52
CNOT9-201ENST00000273064 CALD1Q05682 793 aaKnown RBP18.29■□□□□ 0.52
CNOT9-201ENST00000273064 STAC3Q96MF2 364 aa18.29■□□□□ 0.52
CNOT9-201ENST00000273064 CCDC9Q9Y3X0 531 aaKnown RBP18.29■□□□□ 0.52
CNOT9-201ENST00000273064 TCOF1Q13428 1488 aaKnown RBP18.29■□□□□ 0.52
CNOT9-201ENST00000273064 CHMP4BQ9H444 224 aaKnown RBP18.28■□□□□ 0.52
CNOT9-201ENST00000273064 SYCP2Q9BX26 1530 aa18.28■□□□□ 0.52
CNOT9-201ENST00000273064 NGEFQ8N5V2 710 aa18.28■□□□□ 0.52
CNOT9-201ENST00000273064 DDX19BQ9UMR2 479 aa18.28■□□□□ 0.52
CNOT9-201ENST00000273064 ADAMTS12P58397 1594 aa18.27■□□□□ 0.52
CNOT9-201ENST00000273064 CSB-PGBD3P0DP91 1061 aa18.27■□□□□ 0.52
CNOT9-201ENST00000273064 NAP1L2Q9ULW6 460 aaPredicted RBP18.27■□□□□ 0.52
CNOT9-201ENST00000273064 KIAA0556O60303 1618 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms