RNA–Protein interactions for RNA: ENST00000272163.8

LBR-201, Transcript of lamin B receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LBR, Length 3,745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-201ENST00000272163 POLR3GLQ9BT43 218 aa11.71□□□□□ -0.53
LBR-201ENST00000272163 PREX1Q8TCU6 1659 aa11.71□□□□□ -0.53
LBR-201ENST00000272163 PAK3O75914 559 aaPredicted RBP11.71□□□□□ -0.53
LBR-201ENST00000272163 NGDNQ8NEJ9 315 aaKnown RBP11.7□□□□□ -0.54
LBR-201ENST00000272163 ARHGAP31Q2M1Z3 1444 aa11.7□□□□□ -0.54
LBR-201ENST00000272163 TRIM26Q12899 539 aaPredicted RBP11.7□□□□□ -0.54
LBR-201ENST00000272163 EFCAB6Q5THR3 1501 aa11.69□□□□□ -0.54
LBR-201ENST00000272163 NGLY1Q96IV0 654 aa11.69□□□□□ -0.54
LBR-201ENST00000272163 CCER1Q8TC90 406 aaPredicted RBP11.69□□□□□ -0.54
LBR-201ENST00000272163 DNMT1P26358 1616 aaKnown RBP11.69□□□□□ -0.54
LBR-201ENST00000272163 TRAK1Q9UPV9 953 aa11.69□□□□□ -0.54
LBR-201ENST00000272163 PSME1Q06323 249 aa11.68□□□□□ -0.54
LBR-201ENST00000272163 TMEM132EQ6IEE7 984 aa11.68□□□□□ -0.54
LBR-201ENST00000272163 ADAMTS2O95450 1211 aa11.68□□□□□ -0.54
LBR-201ENST00000272163 DHX57Q6P158 1386 aaKnown RBP11.67□□□□□ -0.54
LBR-201ENST00000272163 C3P01024 1663 aa11.67□□□□□ -0.54
LBR-201ENST00000272163 LRRC59Q96AG4 307 aaKnown RBP11.67□□□□□ -0.54
LBR-201ENST00000272163 ADGRL2O95490 1459 aa11.66□□□□□ -0.54
LBR-201ENST00000272163 RRBP1Q9P2E9 1410 aaKnown RBP11.66□□□□□ -0.54
LBR-201ENST00000272163 SRPK2P78362 688 aaKnown RBP11.66□□□□□ -0.54
LBR-201ENST00000272163 MAST1Q9Y2H9 1570 aa11.65□□□□□ -0.54
LBR-201ENST00000272163 RPRD2Q5VT52 1461 aaKnown RBP11.65□□□□□ -0.54
LBR-201ENST00000272163 RAB3GAP2Q9H2M9 1393 aa11.65□□□□□ -0.54
LBR-201ENST00000272163 HFM1A2PYH4 1435 aa11.65□□□□□ -0.54
LBR-201ENST00000272163 ANKRD30BQ9BXX2 1392 aa11.65□□□□□ -0.55
LBR-201ENST00000272163 PLEKHG1Q9ULL1 1385 aa11.64□□□□□ -0.55
LBR-201ENST00000272163 NAIPQ13075 1403 aa11.64□□□□□ -0.55
LBR-201ENST00000272163 PLXNC1O60486 1568 aa11.64□□□□□ -0.55
LBR-201ENST00000272163 C8orf37Q96NL8 207 aa11.63□□□□□ -0.55
LBR-201ENST00000272163 MINK1Q8N4C8 1332 aaPredicted RBP11.63□□□□□ -0.55
LBR-201ENST00000272163 TONSLQ96HA7 1378 aa11.63□□□□□ -0.55
LBR-201ENST00000272163 FOXO3O43524 673 aa11.63□□□□□ -0.55
LBR-201ENST00000272163 HIRIP3Q9BW71 556 aaPredicted RBP11.63□□□□□ -0.55
LBR-201ENST00000272163 CPS1P31327 1500 aa11.62□□□□□ -0.55
LBR-201ENST00000272163 XPCQ01831 940 aaPredicted RBP11.62□□□□□ -0.55
LBR-201ENST00000272163 CFAP70Q5T0N1 1121 aa11.62□□□□□ -0.55
LBR-201ENST00000272163 STAC3Q96MF2 364 aa11.62□□□□□ -0.55
LBR-201ENST00000272163 SF3B2Q13435 895 aaKnown RBP11.6□□□□□ -0.55
LBR-201ENST00000272163 NPHP3Q7Z494 1330 aa11.6□□□□□ -0.55
LBR-201ENST00000272163 WAPLQ7Z5K2 1190 aa11.6□□□□□ -0.55
LBR-201ENST00000272163 TMC1Q8TDI8 760 aa11.6□□□□□ -0.55
LBR-201ENST00000272163 EIF2AK4Q9P2K8 1649 aaKnown RBP11.59□□□□□ -0.55
LBR-201ENST00000272163 ZNF772Q68DY9 489 aaPredicted RBP11.59□□□□□ -0.55
LBR-201ENST00000272163 PRAM1Q96QH2 718 aa11.59□□□□□ -0.55
LBR-201ENST00000272163 NOS1P29475 1434 aa11.59□□□□□ -0.55
LBR-201ENST00000272163 GPRASP1Q5JY77 1395 aa11.59□□□□□ -0.55
LBR-201ENST00000272163 LRPPRCP42704 1394 aaKnown RBP11.59□□□□□ -0.55
LBR-201ENST00000272163 MROH2AA6NES4 1674 aa11.58□□□□□ -0.56
LBR-201ENST00000272163 PIK3R4Q99570 1358 aa11.58□□□□□ -0.56
LBR-201ENST00000272163 PMFBP1Q8TBY8 1022 aa11.58□□□□□ -0.56
LBR-201ENST00000272163 MYO3AQ8NEV4 1616 aa11.57□□□□□ -0.56
LBR-201ENST00000272163 EVA1CP58658 441 aa11.57□□□□□ -0.56
LBR-201ENST00000272163 ADGRF5Q8IZF2 1346 aa11.57□□□□□ -0.56
LBR-201ENST00000272163 PRDM15P57071 1507 aaPredicted RBP11.57□□□□□ -0.56
LBR-201ENST00000272163 JCADQ9P266 1359 aa11.56□□□□□ -0.56
LBR-201ENST00000272163 PHF8Q9UPP1 1060 aa11.56□□□□□ -0.56
LBR-201ENST00000272163 SPATA31D1Q6ZQQ2 1576 aa11.56□□□□□ -0.56
LBR-201ENST00000272163 SOX12O15370 315 aa11.55□□□□□ -0.56
LBR-201ENST00000272163 HRCP23327 699 aa11.55□□□□□ -0.56
LBR-201ENST00000272163 RXRBP28702 533 aa11.55□□□□□ -0.56
LBR-201ENST00000272163 ZC3H13Q5T200 1668 aaKnown RBP11.54□□□□□ -0.56
LBR-201ENST00000272163 CEP152O94986 1710 aa11.54□□□□□ -0.56
LBR-201ENST00000272163 KRT28Q7Z3Y7 464 aa11.54□□□□□ -0.56
LBR-201ENST00000272163 CARD11Q9BXL7 1154 aa11.54□□□□□ -0.56
LBR-201ENST00000272163 CSB-PGBD3P0DP91 1061 aa11.53□□□□□ -0.56
LBR-201ENST00000272163 ORAI2Q96SN7 254 aa11.53□□□□□ -0.56
LBR-201ENST00000272163 SIN3AQ96ST3 1273 aa11.53□□□□□ -0.56
LBR-201ENST00000272163 RNF17Q9BXT8 1623 aaKnown RBP11.52□□□□□ -0.57
LBR-201ENST00000272163 LMTK2Q8IWU2 1503 aa11.52□□□□□ -0.57
LBR-201ENST00000272163 IQSEC2Q5JU85 1478 aa11.52□□□□□ -0.57
LBR-201ENST00000272163 BRINP3Q76B58 766 aa11.52□□□□□ -0.57
LBR-201ENST00000272163 DDX17Q92841 729 aaKnown RBP11.52□□□□□ -0.57
LBR-201ENST00000272163 PRDM11Q9NQV5 511 aa11.51□□□□□ -0.57
LBR-201ENST00000272163 ADGRB3O60242 1522 aa11.51□□□□□ -0.57
LBR-201ENST00000272163 EIF3AQ14152 1382 aaKnown RBP11.51□□□□□ -0.57
LBR-201ENST00000272163 QTRT2Q9H974 415 aaKnown RBP11.5□□□□□ -0.57
LBR-201ENST00000272163 SIGLEC1Q9BZZ2 1709 aa11.5□□□□□ -0.57
LBR-201ENST00000272163 SOCS7O14512 581 aa11.5□□□□□ -0.57
LBR-201ENST00000272163 SPATA31A6Q5VVP1 1343 aa11.5□□□□□ -0.57
LBR-201ENST00000272163 C14orf93Q9H972 538 aaKnown RBP11.5□□□□□ -0.57
LBR-201ENST00000272163 USP21Q9UK80 565 aa11.5□□□□□ -0.57
LBR-201ENST00000272163 MED14O60244 1454 aa11.49□□□□□ -0.57
LBR-201ENST00000272163 METP08581 1390 aa11.49□□□□□ -0.57
LBR-201ENST00000272163 SLC24A1O60721 1099 aa11.49□□□□□ -0.57
LBR-201ENST00000272163 LRRC7Q96NW7 1537 aa11.49□□□□□ -0.57
LBR-201ENST00000272163 NUTM2GQ5VZR2 741 aa11.48□□□□□ -0.57
LBR-201ENST00000272163 TET3O43151 1660 aa11.48□□□□□ -0.57
LBR-201ENST00000272163 FAM135BQ49AJ0 1406 aa11.48□□□□□ -0.57
LBR-201ENST00000272163 PIK3C2BO00750 1634 aa11.48□□□□□ -0.57
LBR-201ENST00000272163 HDGFL2Q7Z4V5 671 aaPredicted RBP11.48□□□□□ -0.57
LBR-201ENST00000272163 L3MBTL2Q969R5 705 aa11.48□□□□□ -0.57
LBR-201ENST00000272163 STRN4Q9NRL3 753 aa11.48□□□□□ -0.57
LBR-201ENST00000272163 ARHGAP23Q9P227 1491 aa11.47□□□□□ -0.57
LBR-201ENST00000272163 USP35Q9P2H5 1018 aa11.47□□□□□ -0.57
LBR-201ENST00000272163 CENPJQ9HC77 1338 aaPredicted RBP11.47□□□□□ -0.57
LBR-201ENST00000272163 ABTB2Q8N961 1025 aa11.47□□□□□ -0.57
LBR-201ENST00000272163 TRPC5Q9UL62 973 aaPredicted RBP11.47□□□□□ -0.57
LBR-201ENST00000272163 NKTRP30414 1462 aaKnown RBP11.47□□□□□ -0.57
LBR-201ENST00000272163 SLIT1O75093 1534 aa11.46□□□□□ -0.57
LBR-201ENST00000272163 TRPM2O94759 1503 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms