RNA–Protein interactions for RNA: ENST00000268057.8

BBS4-201, Transcript of Bardet-Biedl syndrome 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BBS4, Length 2,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-201ENST00000268057 RALBP1Q15311 655 aa11.42□□□□□ -0.58
BBS4-201ENST00000268057 FAM9BQ8IZU0 186 aa11.42□□□□□ -0.58
BBS4-201ENST00000268057 ABCA6Q8N139 1617 aa11.42□□□□□ -0.58
BBS4-201ENST00000268057 RSPH4AQ5TD94 716 aa11.42□□□□□ -0.58
BBS4-201ENST00000268057 PNISRQ8TF01 805 aaKnown RBP11.42□□□□□ -0.58
BBS4-201ENST00000268057 EIF2AK4Q9P2K8 1649 aaKnown RBP11.41□□□□□ -0.58
BBS4-201ENST00000268057 WASHC2CQ9Y4E1 1318 aa11.41□□□□□ -0.58
BBS4-201ENST00000268057 PLXNC1O60486 1568 aa11.41□□□□□ -0.58
BBS4-201ENST00000268057 CCDC141Q6ZP82 1450 aa11.41□□□□□ -0.58
BBS4-201ENST00000268057 A2ML1A8K2U0 1454 aa11.4□□□□□ -0.58
BBS4-201ENST00000268057 CNKSR2Q8WXI2 1034 aa11.4□□□□□ -0.59
BBS4-201ENST00000268057 MYBBP1AQ9BQG0 1328 aaKnown RBP11.39□□□□□ -0.59
BBS4-201ENST00000268057 ZNF335Q9H4Z2 1342 aaPredicted RBP11.39□□□□□ -0.59
BBS4-201ENST00000268057 RNF17Q9BXT8 1623 aaKnown RBP11.39□□□□□ -0.59
BBS4-201ENST00000268057 PRDM15P57071 1507 aaPredicted RBP11.38□□□□□ -0.59
BBS4-201ENST00000268057 PARD3Q8TEW0 1356 aa11.38□□□□□ -0.59
BBS4-201ENST00000268057 DEPDC5O75140 1603 aa11.38□□□□□ -0.59
BBS4-201ENST00000268057 IQGAP3Q86VI3 1631 aa11.38□□□□□ -0.59
BBS4-201ENST00000268057 PLEKHH2Q8IVE3 1493 aa11.38□□□□□ -0.59
BBS4-201ENST00000268057 PDE3BQ13370 1112 aa11.38□□□□□ -0.59
BBS4-201ENST00000268057 NUP155O75694 1391 aa11.38□□□□□ -0.59
BBS4-201ENST00000268057 PRAG1Q86YV5 1406 aa11.38□□□□□ -0.59
BBS4-201ENST00000268057 BCL11AQ9H165 835 aa11.37□□□□□ -0.59
BBS4-201ENST00000268057 SAMD9LQ8IVG5 1584 aa11.37□□□□□ -0.59
BBS4-201ENST00000268057 IRX6P78412 446 aaPredicted RBP11.37□□□□□ -0.59
BBS4-201ENST00000268057 ERICH6Q7L0X2 663 aa11.37□□□□□ -0.59
BBS4-201ENST00000268057 CDC42BPBQ9Y5S2 1711 aa11.36□□□□□ -0.59
BBS4-201ENST00000268057 ZMYM3Q14202 1370 aa11.35□□□□□ -0.59
BBS4-201ENST00000268057 ABCC1P33527 1531 aa11.35□□□□□ -0.59
BBS4-201ENST00000268057 MED14O60244 1454 aa11.35□□□□□ -0.59
BBS4-201ENST00000268057 ARHGAP5Q13017 1502 aa11.35□□□□□ -0.59
BBS4-201ENST00000268057 B4GALNT3Q6L9W6 998 aa11.34□□□□□ -0.59
BBS4-201ENST00000268057 NCKAP5LQ9HCH0 1330 aa11.34□□□□□ -0.59
BBS4-201ENST00000268057 BLMP54132 1417 aaPredicted RBP11.33□□□□□ -0.6
BBS4-201ENST00000268057 CARD11Q9BXL7 1154 aa11.33□□□□□ -0.6
BBS4-201ENST00000268057 VWDEQ8N2E2 1590 aa11.33□□□□□ -0.6
BBS4-201ENST00000268057 TSPY4P0CV99 314 aa11.33□□□□□ -0.6
BBS4-201ENST00000268057 TSPY10P0CW01 314 aa11.33□□□□□ -0.6
BBS4-201ENST00000268057 KIDINS220Q9ULH0 1771 aa11.33□□□□□ -0.6
BBS4-201ENST00000268057 NLRP13Q86W25 1043 aa11.32□□□□□ -0.6
BBS4-201ENST00000268057 TMC1Q8TDI8 760 aa11.32□□□□□ -0.6
BBS4-201ENST00000268057 NOP58Q9Y2X3 529 aaKnown RBP11.32□□□□□ -0.6
BBS4-201ENST00000268057 CCDC144AA2RUR9 1427 aa11.32□□□□□ -0.6
BBS4-201ENST00000268057 NEURL4Q96JN8 1562 aa11.31□□□□□ -0.6
BBS4-201ENST00000268057 ARID3CA6NKF2 412 aa11.31□□□□□ -0.6
BBS4-201ENST00000268057 ERBINQ96RT1 1412 aa11.31□□□□□ -0.6
BBS4-201ENST00000268057 DUOX2Q9NRD8 1548 aa11.31□□□□□ -0.6
BBS4-201ENST00000268057 CCDC136Q96JN2 1154 aa11.3□□□□□ -0.6
BBS4-201ENST00000268057 A2MP01023 1474 aa11.3□□□□□ -0.6
BBS4-201ENST00000268057 CLTCQ00610 1675 aaKnown RBP11.3□□□□□ -0.6
BBS4-201ENST00000268057 ALKQ9UM73 1620 aa11.3□□□□□ -0.6
BBS4-201ENST00000268057 MS4A1P11836 297 aa11.29□□□□□ -0.6
BBS4-201ENST00000268057 NLRP1Q9C000 1473 aa11.28□□□□□ -0.6
BBS4-201ENST00000268057 ST20-MTHFSA0A0A6YYL1 179 aa11.28□□□□□ -0.6
BBS4-201ENST00000268057 RRP1P56182 461 aaKnown RBP11.28□□□□□ -0.6
BBS4-201ENST00000268057 STAC3Q96MF2 364 aa11.28□□□□□ -0.6
BBS4-201ENST00000268057 TCERG1O14776 1098 aaKnown RBP11.28□□□□□ -0.6
BBS4-201ENST00000268057 PER1O15534 1290 aaPredicted RBP11.28□□□□□ -0.6
BBS4-201ENST00000268057 IPO9Q96P70 1041 aaKnown RBP11.28□□□□□ -0.6
BBS4-201ENST00000268057 ANP32AP39687 249 aaKnown RBP11.27□□□□□ -0.61
BBS4-201ENST00000268057 PIP4K2BP78356 416 aa11.27□□□□□ -0.61
BBS4-201ENST00000268057 SYCP2Q9BX26 1530 aa11.27□□□□□ -0.61
BBS4-201ENST00000268057 IQGAP1P46940 1657 aa11.26□□□□□ -0.61
BBS4-201ENST00000268057 FAM135BQ49AJ0 1406 aa11.26□□□□□ -0.61
BBS4-201ENST00000268057 ZNF777Q9ULD5 760 aaPredicted RBP11.26□□□□□ -0.61
BBS4-201ENST00000268057 ANKLE2Q86XL3 938 aa11.25□□□□□ -0.61
BBS4-201ENST00000268057 NPHP4O75161 1426 aaPredicted RBP11.25□□□□□ -0.61
BBS4-201ENST00000268057 AFAP1Q8N556 730 aa11.25□□□□□ -0.61
BBS4-201ENST00000268057 KIAA1210Q9ULL0 1709 aa11.24□□□□□ -0.61
BBS4-201ENST00000268057 NPC1L1Q9UHC9 1359 aa11.24□□□□□ -0.61
BBS4-201ENST00000268057 INO80Q9ULG1 1556 aaPredicted RBP11.24□□□□□ -0.61
BBS4-201ENST00000268057 THEMISQ8N1K5 641 aaPredicted RBP11.24□□□□□ -0.61
BBS4-201ENST00000268057 DCAF11Q8TEB1 546 aa11.24□□□□□ -0.61
BBS4-201ENST00000268057 TESK2Q96S53 571 aa11.24□□□□□ -0.61
BBS4-201ENST00000268057 RCAN3Q9UKA8 241 aa11.24□□□□□ -0.61
BBS4-201ENST00000268057 CDK12Q9NYV4 1490 aaPredicted RBP11.23□□□□□ -0.61
BBS4-201ENST00000268057 LRRC7Q96NW7 1537 aa11.23□□□□□ -0.61
BBS4-201ENST00000268057 RGS17Q9UGC6 210 aaPredicted RBP11.23□□□□□ -0.61
BBS4-201ENST00000268057 SPHKAPQ2M3C7 1700 aa11.22□□□□□ -0.61
BBS4-201ENST00000268057 ZNF326Q5BKZ1 582 aaKnown RBP11.22□□□□□ -0.61
BBS4-201ENST00000268057 TRPM2O94759 1503 aa11.22□□□□□ -0.61
BBS4-201ENST00000268057 ATP7AQ04656 1500 aa11.22□□□□□ -0.61
BBS4-201ENST00000268057 TNRQ92752 1358 aa11.22□□□□□ -0.61
BBS4-201ENST00000268057 CEP152O94986 1710 aa11.21□□□□□ -0.61
BBS4-201ENST00000268057 RTEL1-TNFRSF6BF6WH68 1400 aa11.21□□□□□ -0.62
BBS4-201ENST00000268057 USP35Q9P2H5 1018 aa11.2□□□□□ -0.62
BBS4-201ENST00000268057 PIK3C2GO75747 1445 aa11.2□□□□□ -0.62
BBS4-201ENST00000268057 HNRNPMP52272 730 aaKnown RBP eCLIP11.19□□□□□ -0.62
BBS4-201ENST00000268057 SPAG9O60271 1321 aaKnown RBP11.18□□□□□ -0.62
BBS4-201ENST00000268057 TMF1P82094 1093 aa11.18□□□□□ -0.62
BBS4-201ENST00000268057 ZBTB47Q9UFB7 747 aaPredicted RBP11.18□□□□□ -0.62
BBS4-201ENST00000268057 SLC24A1O60721 1099 aa11.17□□□□□ -0.62
BBS4-201ENST00000268057 DEKP35659 375 aaKnown RBP11.17□□□□□ -0.62
BBS4-201ENST00000268057 BACH2Q9BYV9 841 aa11.17□□□□□ -0.62
BBS4-201ENST00000268057 TET3O43151 1660 aa11.17□□□□□ -0.62
BBS4-201ENST00000268057 PAK3O75914 559 aaPredicted RBP11.16□□□□□ -0.62
BBS4-201ENST00000268057 NGEFQ8N5V2 710 aa11.16□□□□□ -0.62
BBS4-201ENST00000268057 SCAF11Q99590 1463 aaKnown RBP11.16□□□□□ -0.62
BBS4-201ENST00000268057 EIF3AQ14152 1382 aaKnown RBP11.16□□□□□ -0.62
BBS4-201ENST00000268057 CDCA8Q53HL2 280 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms