RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 FBXO31Q5XUX0 539 aaPredicted RBP22.92■■□□□ 1.26
TPM1-201ENST00000267996 CHGAP10645 457 aaKnown RBP22.9■■□□□ 1.26
TPM1-201ENST00000267996 ADGRF5Q8IZF2 1346 aa22.9■■□□□ 1.26
TPM1-201ENST00000267996 KIF7Q2M1P5 1343 aa22.89■■□□□ 1.25
TPM1-201ENST00000267996 ARID4BQ4LE39 1312 aaPredicted RBP22.89■■□□□ 1.25
TPM1-201ENST00000267996 ST20-MTHFSA0A0A6YYL1 179 aa22.88■■□□□ 1.25
TPM1-201ENST00000267996 TMEM131LA2VDJ0 1609 aa22.88■■□□□ 1.25
TPM1-201ENST00000267996 ZMYM3Q14202 1370 aa22.88■■□□□ 1.25
TPM1-201ENST00000267996 NEXMIFQ5QGS0 1516 aa22.87■■□□□ 1.25
TPM1-201ENST00000267996 IQGAP1P46940 1657 aa22.85■■□□□ 1.25
TPM1-201ENST00000267996 ESF1Q9H501 851 aaKnown RBP22.85■■□□□ 1.25
TPM1-201ENST00000267996 PIK3C2GO75747 1445 aa22.84■■□□□ 1.25
TPM1-201ENST00000267996 ZFYVE9O95405 1425 aa22.84■■□□□ 1.25
TPM1-201ENST00000267996 SCAF11Q99590 1463 aaKnown RBP22.82■■□□□ 1.24
TPM1-201ENST00000267996 MYO5BQ9ULV0 1848 aa22.81■■□□□ 1.24
TPM1-201ENST00000267996 CFAP70Q5T0N1 1121 aa22.81■■□□□ 1.24
TPM1-201ENST00000267996 SETBP1Q9Y6X0 1596 aa22.8■■□□□ 1.24
TPM1-201ENST00000267996 VGFO15240 615 aaPredicted RBP22.8■■□□□ 1.24
TPM1-201ENST00000267996 TESK2Q96S53 571 aa22.79■■□□□ 1.24
TPM1-201ENST00000267996 C14orf93Q9H972 538 aaKnown RBP22.78■■□□□ 1.24
TPM1-201ENST00000267996 A2ML1A8K2U0 1454 aa22.76■■□□□ 1.23
TPM1-201ENST00000267996 TNRQ92752 1358 aa22.74■■□□□ 1.23
TPM1-201ENST00000267996 ADGRB1O14514 1584 aa22.74■■□□□ 1.23
TPM1-201ENST00000267996 ANP32CO43423 234 aa22.73■■□□□ 1.23
TPM1-201ENST00000267996 EIF3AQ14152 1382 aaKnown RBP22.71■■□□□ 1.23
TPM1-201ENST00000267996 FER1L4A9Z1Z3 1794 aa22.71■■□□□ 1.23
TPM1-201ENST00000267996 KDM5AP29375 1690 aaKnown RBP22.7■■□□□ 1.22
TPM1-201ENST00000267996 STAG3Q9UJ98 1225 aa22.69■■□□□ 1.22
TPM1-201ENST00000267996 C3P01024 1663 aa22.68■■□□□ 1.22
TPM1-201ENST00000267996 DISP3Q9P2K9 1392 aa22.68■■□□□ 1.22
TPM1-201ENST00000267996 NUTM2DQ5VT03 806 aaPredicted RBP22.68■■□□□ 1.22
TPM1-201ENST00000267996 MYO3AQ8NEV4 1616 aa22.67■■□□□ 1.22
TPM1-201ENST00000267996 CCER2I3L3R5 266 aa22.67■■□□□ 1.22
TPM1-201ENST00000267996 TMF1P82094 1093 aa22.67■■□□□ 1.22
TPM1-201ENST00000267996 NLRP1Q9C000 1473 aa22.65■■□□□ 1.22
TPM1-201ENST00000267996 RIMS2Q9UQ26 1411 aa22.65■■□□□ 1.22
TPM1-201ENST00000267996 POLR3GLQ9BT43 218 aa22.64■■□□□ 1.21
TPM1-201ENST00000267996 SLC24A1O60721 1099 aa22.63■■□□□ 1.21
TPM1-201ENST00000267996 SBNO2Q9Y2G9 1366 aa22.63■■□□□ 1.21
TPM1-201ENST00000267996 UBR1Q8IWV7 1749 aa22.62■■□□□ 1.21
TPM1-201ENST00000267996 CEBPAP49715 358 aaPredicted RBP22.62■■□□□ 1.21
TPM1-201ENST00000267996 ASXL1Q8IXJ9 1541 aa22.61■■□□□ 1.21
TPM1-201ENST00000267996 TMEM132EQ6IEE7 984 aa22.61■■□□□ 1.21
TPM1-201ENST00000267996 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.6■■□□□ 1.21
TPM1-201ENST00000267996 ALKQ9UM73 1620 aa22.59■■□□□ 1.21
TPM1-201ENST00000267996 CDCA8Q53HL2 280 aa22.58■■□□□ 1.2
TPM1-201ENST00000267996 ADAMTSL3P82987 1691 aa22.57■■□□□ 1.2
TPM1-201ENST00000267996 PRKRIP1Q9H875 184 aaPredicted RBP22.57■■□□□ 1.2
TPM1-201ENST00000267996 TRAK1Q9UPV9 953 aa22.57■■□□□ 1.2
TPM1-201ENST00000267996 CENPJQ9HC77 1338 aaPredicted RBP22.57■■□□□ 1.2
TPM1-201ENST00000267996 TMEM2Q9UHN6 1383 aa22.57■■□□□ 1.2
TPM1-201ENST00000267996 ARHGEF28Q8N1W1 1705 aaKnown RBP22.55■■□□□ 1.2
TPM1-201ENST00000267996 HDGFP51858 240 aaKnown RBP22.55■■□□□ 1.2
TPM1-201ENST00000267996 SETD1AO15047 1707 aaKnown RBP22.54■■□□□ 1.2
TPM1-201ENST00000267996 PTPRMP28827 1452 aa22.53■■□□□ 1.2
TPM1-201ENST00000267996 NRXN3Q9Y4C0 1643 aa22.52■■□□□ 1.2
TPM1-201ENST00000267996 RIMS1Q86UR5 1692 aaKnown RBP22.52■■□□□ 1.2
TPM1-201ENST00000267996 QRICH2Q9H0J4 1663 aa22.52■■□□□ 1.2
TPM1-201ENST00000267996 YTHDC2Q9H6S0 1430 aaKnown RBP22.51■■□□□ 1.19
TPM1-201ENST00000267996 PER1O15534 1290 aaPredicted RBP22.5■■□□□ 1.19
TPM1-201ENST00000267996 YTHDC1Q96MU7 727 aaKnown RBP22.49■■□□□ 1.19
TPM1-201ENST00000267996 ARHGAP23Q9P227 1491 aa22.49■■□□□ 1.19
TPM1-201ENST00000267996 SLIT1O75093 1534 aa22.48■■□□□ 1.19
TPM1-201ENST00000267996 MYOM1P52179 1685 aa22.46■■□□□ 1.19
TPM1-201ENST00000267996 PANK3Q9H999 370 aa22.46■■□□□ 1.19
TPM1-201ENST00000267996 LRPPRCP42704 1394 aaKnown RBP22.46■■□□□ 1.19
TPM1-201ENST00000267996 DLC1Q96QB1 1528 aa22.46■■□□□ 1.19
TPM1-201ENST00000267996 KTN1Q86UP2 1357 aaKnown RBP22.45■■□□□ 1.18
TPM1-201ENST00000267996 CENPBP07199 599 aaPredicted RBP22.45■■□□□ 1.18
TPM1-201ENST00000267996 PUS7Q96PZ0 661 aaKnown RBP22.45■■□□□ 1.18
TPM1-201ENST00000267996 PLEKHG1Q9ULL1 1385 aa22.44■■□□□ 1.18
TPM1-201ENST00000267996 SENP3Q9H4L4 574 aaPredicted RBP22.43■■□□□ 1.18
TPM1-201ENST00000267996 STK26Q9P289 416 aa22.43■■□□□ 1.18
TPM1-201ENST00000267996 ABCC11Q96J66 1382 aa22.43■■□□□ 1.18
TPM1-201ENST00000267996 LTKP29376 864 aa22.42■■□□□ 1.18
TPM1-201ENST00000267996 THEMISQ8N1K5 641 aaPredicted RBP22.42■■□□□ 1.18
TPM1-201ENST00000267996 PLPPR3Q6T4P5 718 aa22.42■■□□□ 1.18
TPM1-201ENST00000267996 CEP170BQ9Y4F5 1589 aaPredicted RBP22.41■■□□□ 1.18
TPM1-201ENST00000267996 TULP4Q9NRJ4 1543 aa22.41■■□□□ 1.18
TPM1-201ENST00000267996 ADAMTS13Q76LX8 1427 aa22.41■■□□□ 1.18
TPM1-201ENST00000267996 METP08581 1390 aa22.4■■□□□ 1.18
TPM1-201ENST00000267996 RALBP1Q15311 655 aa22.39■■□□□ 1.18
TPM1-201ENST00000267996 TXNDC2Q86VQ3 553 aa22.39■■□□□ 1.18
TPM1-201ENST00000267996 MED14O60244 1454 aa22.39■■□□□ 1.17
TPM1-201ENST00000267996 SETD1BQ9UPS6 1966 aaKnown RBP22.39■■□□□ 1.17
TPM1-201ENST00000267996 EID1Q9Y6B2 187 aa22.39■■□□□ 1.17
TPM1-201ENST00000267996 EVC2Q86UK5 1308 aa22.38■■□□□ 1.17
TPM1-201ENST00000267996 TECPR2O15040 1411 aa22.38■■□□□ 1.17
TPM1-201ENST00000267996 PRAM1Q96QH2 718 aa22.38■■□□□ 1.17
TPM1-201ENST00000267996 PARD3Q8TEW0 1356 aa22.38■■□□□ 1.17
TPM1-201ENST00000267996 CCDC184Q52MB2 194 aa22.37■■□□□ 1.17
TPM1-201ENST00000267996 KNDC1Q76NI1 1749 aa22.37■■□□□ 1.17
TPM1-201ENST00000267996 ZNF142P52746 1687 aaPredicted RBP22.37■■□□□ 1.17
TPM1-201ENST00000267996 SIRT1Q96EB6 747 aa22.36■■□□□ 1.17
TPM1-201ENST00000267996 POGKQ9P215 609 aa22.35■■□□□ 1.17
TPM1-201ENST00000267996 NPC1L1Q9UHC9 1359 aa22.33■■□□□ 1.17
TPM1-201ENST00000267996 FAM135BQ49AJ0 1406 aa22.33■■□□□ 1.17
TPM1-201ENST00000267996 CPS1P31327 1500 aa22.32■■□□□ 1.16
TPM1-201ENST00000267996 MYBBP1AQ9BQG0 1328 aaKnown RBP22.32■■□□□ 1.16
TPM1-201ENST00000267996 SAFB2Q14151 953 aaKnown RBP eCLIP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms