RNA–Protein interactions for RNA: ENST00000265562.4

PTPN23-201, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN23, Length 5,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-201ENST00000265562 HOMER1Q86YM7 354 aa17.07■□□□□ 0.32
PTPN23-201ENST00000265562 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
PTPN23-201ENST00000265562 TRAK1Q9UPV9 953 aa17.07■□□□□ 0.32
PTPN23-201ENST00000265562 CCDC70Q6NSX1 233 aa17.06■□□□□ 0.32
PTPN23-201ENST00000265562 KIF3BO15066 747 aa17.06■□□□□ 0.32
PTPN23-201ENST00000265562 RUFY2Q8WXA3 655 aa17.06■□□□□ 0.32
PTPN23-201ENST00000265562 ZKSCAN1P17029 563 aaPredicted RBP17.06■□□□□ 0.32
PTPN23-201ENST00000265562 TAF7LQ5H9L4 462 aa17.06■□□□□ 0.32
PTPN23-201ENST00000265562 IFT57Q9NWB7 429 aa17.06■□□□□ 0.32
PTPN23-201ENST00000265562 MLECQ14165 292 aa17.05■□□□□ 0.32
PTPN23-201ENST00000265562 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.05■□□□□ 0.32
PTPN23-201ENST00000265562 RUSC2Q8N2Y8 1516 aa17.05■□□□□ 0.32
PTPN23-201ENST00000265562 PES1O00541 588 aaKnown RBP17.05■□□□□ 0.32
PTPN23-201ENST00000265562 BICD2Q8TD16 824 aa17.05■□□□□ 0.32
PTPN23-201ENST00000265562 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
PTPN23-201ENST00000265562 API5Q9BZZ5 524 aaKnown RBP17.04■□□□□ 0.32
PTPN23-201ENST00000265562 SMARCA4P51532 1647 aa17.04■□□□□ 0.32
PTPN23-201ENST00000265562 LNPKQ9C0E8 428 aa17.04■□□□□ 0.32
PTPN23-201ENST00000265562 ARGLU1Q9NWB6 273 aaPredicted RBP17.04■□□□□ 0.32
PTPN23-201ENST00000265562 ANO2Q9NQ90 1003 aa17.03■□□□□ 0.32
PTPN23-201ENST00000265562 WASHC2AQ641Q2 1341 aa17.03■□□□□ 0.32
PTPN23-201ENST00000265562 CCDC173Q0VFZ6 552 aa17.03■□□□□ 0.32
PTPN23-201ENST00000265562 SASS6Q6UVJ0 657 aa17.03■□□□□ 0.32
PTPN23-201ENST00000265562 PANK1Q8TE04 598 aa17.03■□□□□ 0.32
PTPN23-201ENST00000265562 BRD4O60885 1362 aaPredicted RBP17.03■□□□□ 0.32
PTPN23-201ENST00000265562 BACH2Q9BYV9 841 aa17.03■□□□□ 0.32
PTPN23-201ENST00000265562 TOMM22Q9NS69 142 aa17.02■□□□□ 0.32
PTPN23-201ENST00000265562 SMC3Q9UQE7 1217 aa17.02■□□□□ 0.32
PTPN23-201ENST00000265562 RUNDC1Q96C34 613 aa17.02■□□□□ 0.31
PTPN23-201ENST00000265562 VPS37CA5D8V6 355 aaPredicted RBP17.01■□□□□ 0.31
PTPN23-201ENST00000265562 RNF214Q8ND24 703 aa17.01■□□□□ 0.31
PTPN23-201ENST00000265562 MNS1Q8NEH6 495 aa17■□□□□ 0.31
PTPN23-201ENST00000265562 CDC45O75419 566 aa17■□□□□ 0.31
PTPN23-201ENST00000265562 AMPHP49418 695 aa17■□□□□ 0.31
PTPN23-201ENST00000265562 ROCK1Q13464 1354 aa17■□□□□ 0.31
PTPN23-201ENST00000265562 CAVIN1Q6NZI2 390 aaKnown RBP16.99■□□□□ 0.31
PTPN23-201ENST00000265562 CSB-PGBD3P0DP91 1061 aa16.99■□□□□ 0.31
PTPN23-201ENST00000265562 NOM1Q5C9Z4 860 aaKnown RBP16.99■□□□□ 0.31
PTPN23-201ENST00000265562 HMGN5P82970 282 aaKnown RBP16.98■□□□□ 0.31
PTPN23-201ENST00000265562 NUTM2DQ5VT03 806 aaPredicted RBP16.98■□□□□ 0.31
PTPN23-201ENST00000265562 UACAQ9BZF9 1416 aa16.98■□□□□ 0.31
PTPN23-201ENST00000265562 RIPK4P57078 832 aa16.98■□□□□ 0.31
PTPN23-201ENST00000265562 MBD3O95983 291 aa16.98■□□□□ 0.31
PTPN23-201ENST00000265562 PDE4CQ08493 712 aa16.98■□□□□ 0.31
PTPN23-201ENST00000265562 CEP89Q96ST8 783 aa16.98■□□□□ 0.31
PTPN23-201ENST00000265562 RBM10P98175 930 aaKnown RBP16.97■□□□□ 0.31
PTPN23-201ENST00000265562 IPO7O95373 1038 aaKnown RBP16.97■□□□□ 0.31
PTPN23-201ENST00000265562 CDCA7LQ96GN5 454 aa16.97■□□□□ 0.31
PTPN23-201ENST00000265562 EVC2Q86UK5 1308 aa16.97■□□□□ 0.31
PTPN23-201ENST00000265562 CCDC66A2RUB6 948 aa16.97■□□□□ 0.31
PTPN23-201ENST00000265562 CPLX2Q6PUV4 134 aaKnown RBP16.96■□□□□ 0.31
PTPN23-201ENST00000265562 RNF20Q5VTR2 975 aa16.96■□□□□ 0.31
PTPN23-201ENST00000265562 JPH4Q96JJ6 628 aa16.96■□□□□ 0.31
PTPN23-201ENST00000265562 PRKCSHP14314 528 aaPredicted RBP16.96■□□□□ 0.31
PTPN23-201ENST00000265562 DIAPH1O60610 1272 aaKnown RBP16.95■□□□□ 0.3
PTPN23-201ENST00000265562 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
PTPN23-201ENST00000265562 ACBD3Q9H3P7 528 aa16.95■□□□□ 0.3
PTPN23-201ENST00000265562 LETM1O95202 739 aaPredicted RBP16.95■□□□□ 0.3
PTPN23-201ENST00000265562 CCDC73Q6ZRK6 1079 aa16.95■□□□□ 0.3
PTPN23-201ENST00000265562 AKNAQ7Z591 1439 aa16.95■□□□□ 0.3
PTPN23-201ENST00000265562 ADAMTS8Q9UP79 889 aa16.94■□□□□ 0.3
PTPN23-201ENST00000265562 RRP9O43818 475 aaKnown RBP16.94■□□□□ 0.3
PTPN23-201ENST00000265562 ANKRD20A12PQ8NF67 263 aa16.94■□□□□ 0.3
PTPN23-201ENST00000265562 TSPY26PQ9H489 355 aa16.94■□□□□ 0.3
PTPN23-201ENST00000265562 AKAP17AQ02040 695 aaKnown RBP16.93■□□□□ 0.3
PTPN23-201ENST00000265562 GRPEL1Q9HAV7 217 aa16.93■□□□□ 0.3
PTPN23-201ENST00000265562 HSP90B2PQ58FF3 399 aa16.93■□□□□ 0.3
PTPN23-201ENST00000265562 HOOK1Q9UJC3 728 aaKnown RBP16.93■□□□□ 0.3
PTPN23-201ENST00000265562 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.93■□□□□ 0.3
PTPN23-201ENST00000265562 IFIT2P09913 472 aaKnown RBP16.93■□□□□ 0.3
PTPN23-201ENST00000265562 TRIM29Q14134 588 aa16.93■□□□□ 0.3
PTPN23-201ENST00000265562 NGDNQ8NEJ9 315 aaKnown RBP16.93■□□□□ 0.3
PTPN23-201ENST00000265562 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
PTPN23-201ENST00000265562 PDZRN3Q9UPQ7 1066 aa16.93■□□□□ 0.3
PTPN23-201ENST00000265562 LTV1Q96GA3 475 aaPredicted RBP16.93■□□□□ 0.3
PTPN23-201ENST00000265562 COG3Q96JB2 828 aa16.93■□□□□ 0.3
PTPN23-201ENST00000265562 PRPF40AO75400 957 aaKnown RBP16.92■□□□□ 0.3
PTPN23-201ENST00000265562 SYNE3Q6ZMZ3 975 aa16.92■□□□□ 0.3
PTPN23-201ENST00000265562 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
PTPN23-201ENST00000265562 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
PTPN23-201ENST00000265562 CPLX1O14810 134 aa16.92■□□□□ 0.3
PTPN23-201ENST00000265562 CWC15Q9P013 229 aaKnown RBP16.92■□□□□ 0.3
PTPN23-201ENST00000265562 MIA2Q96PC5 1412 aa16.91■□□□□ 0.3
PTPN23-201ENST00000265562 WASHC2CQ9Y4E1 1318 aa16.91■□□□□ 0.3
PTPN23-201ENST00000265562 LRRFIP1Q32MZ4 808 aaKnown RBP16.91■□□□□ 0.3
PTPN23-201ENST00000265562 MARCH6O60337 910 aa16.91■□□□□ 0.3
PTPN23-201ENST00000265562 FBXW7Q969H0 707 aa16.9■□□□□ 0.3
PTPN23-201ENST00000265562 FGD6Q6ZV73 1430 aa16.9■□□□□ 0.3
PTPN23-201ENST00000265562 BCL11BQ9C0K0 894 aaPredicted RBP16.9■□□□□ 0.3
PTPN23-201ENST00000265562 NAT10Q9H0A0 1025 aaKnown RBP16.9■□□□□ 0.3
PTPN23-201ENST00000265562 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.9■□□□□ 0.3
PTPN23-201ENST00000265562 GNAI1P63096 354 aa16.9■□□□□ 0.3
PTPN23-201ENST00000265562 SMG6Q86US8 1419 aaKnown RBP16.89■□□□□ 0.3
PTPN23-201ENST00000265562 PATL2C9JE40 543 aaKnown RBP16.89■□□□□ 0.29
PTPN23-201ENST00000265562 MSH5O43196 834 aa16.89■□□□□ 0.29
PTPN23-201ENST00000265562 PDE3AQ14432 1141 aa16.89■□□□□ 0.29
PTPN23-201ENST00000265562 RABEP1Q15276 862 aa16.89■□□□□ 0.29
PTPN23-201ENST00000265562 AK7Q96M32 723 aa16.89■□□□□ 0.29
PTPN23-201ENST00000265562 C9orf78Q9NZ63 289 aaPredicted RBP16.89■□□□□ 0.29
PTPN23-201ENST00000265562 ESPNB1AK53 854 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms