RNA–Protein interactions for RNA: ENST00000265073.8

SUB1-201, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUB1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-201ENST00000265073 NEFLP07196 543 aa11.91□□□□□ -0.5
SUB1-201ENST00000265073 SLC12A5Q9H2X9 1139 aa11.91□□□□□ -0.5
SUB1-201ENST00000265073 KNSTRNQ9Y448 316 aa11.91□□□□□ -0.5
SUB1-201ENST00000265073 GPRASP1Q5JY77 1395 aa11.9□□□□□ -0.5
SUB1-201ENST00000265073 PNISRQ8TF01 805 aaKnown RBP11.9□□□□□ -0.5
SUB1-201ENST00000265073 DIP2CQ9Y2E4 1556 aa11.9□□□□□ -0.5
SUB1-201ENST00000265073 RNF17Q9BXT8 1623 aaKnown RBP11.89□□□□□ -0.51
SUB1-201ENST00000265073 CABP2Q9NPB3 220 aa11.89□□□□□ -0.51
SUB1-201ENST00000265073 MROH2AA6NES4 1674 aa11.89□□□□□ -0.51
SUB1-201ENST00000265073 VWDEQ8N2E2 1590 aa11.89□□□□□ -0.51
SUB1-201ENST00000265073 DIP2BQ9P265 1576 aa11.89□□□□□ -0.51
SUB1-201ENST00000265073 ABCC3O15438 1527 aa11.89□□□□□ -0.51
SUB1-201ENST00000265073 KTN1Q86UP2 1357 aaKnown RBP11.88□□□□□ -0.51
SUB1-201ENST00000265073 MINK1Q8N4C8 1332 aaPredicted RBP11.88□□□□□ -0.51
SUB1-201ENST00000265073 MADDQ8WXG6 1647 aa11.88□□□□□ -0.51
SUB1-201ENST00000265073 MAP3K4Q9Y6R4 1608 aa11.87□□□□□ -0.51
SUB1-201ENST00000265073 MYBBP1AQ9BQG0 1328 aaKnown RBP11.87□□□□□ -0.51
SUB1-201ENST00000265073 RICTORQ6R327 1708 aa11.86□□□□□ -0.51
SUB1-201ENST00000265073 SIGLEC1Q9BZZ2 1709 aa11.86□□□□□ -0.51
SUB1-201ENST00000265073 CENPJQ9HC77 1338 aaPredicted RBP11.86□□□□□ -0.51
SUB1-201ENST00000265073 SCAF11Q99590 1463 aaKnown RBP11.86□□□□□ -0.51
SUB1-201ENST00000265073 CARD14Q9BXL6 1004 aa11.85□□□□□ -0.51
SUB1-201ENST00000265073 CFAP74Q9C0B2 1584 aa11.85□□□□□ -0.51
SUB1-201ENST00000265073 NUTM2FA1L443 756 aa11.85□□□□□ -0.51
SUB1-201ENST00000265073 CCDC146Q8IYE0 955 aa11.85□□□□□ -0.51
SUB1-201ENST00000265073 C14orf93Q9H972 538 aaKnown RBP11.85□□□□□ -0.51
SUB1-201ENST00000265073 KIF1BO60333 1816 aa11.85□□□□□ -0.51
SUB1-201ENST00000265073 VGFO15240 615 aaPredicted RBP11.85□□□□□ -0.51
SUB1-201ENST00000265073 WAPLQ7Z5K2 1190 aa11.85□□□□□ -0.51
SUB1-201ENST00000265073 CDCA7LQ96GN5 454 aa11.84□□□□□ -0.51
SUB1-201ENST00000265073 SRPK2P78362 688 aaKnown RBP11.84□□□□□ -0.51
SUB1-201ENST00000265073 RALBP1Q15311 655 aa11.84□□□□□ -0.51
SUB1-201ENST00000265073 EIF2AK4Q9P2K8 1649 aaKnown RBP11.84□□□□□ -0.51
SUB1-201ENST00000265073 NLRP13Q86W25 1043 aa11.83□□□□□ -0.51
SUB1-201ENST00000265073 POLR1AO95602 1720 aaPredicted RBP11.83□□□□□ -0.52
SUB1-201ENST00000265073 POGKQ9P215 609 aa11.83□□□□□ -0.52
SUB1-201ENST00000265073 PRAM1Q96QH2 718 aa11.83□□□□□ -0.52
SUB1-201ENST00000265073 ADAMTS8Q9UP79 889 aa11.82□□□□□ -0.52
SUB1-201ENST00000265073 AMER1Q5JTC6 1135 aaPredicted RBP11.82□□□□□ -0.52
SUB1-201ENST00000265073 FBLN1P23142 703 aa11.81□□□□□ -0.52
SUB1-201ENST00000265073 SYNMO15061 1565 aa11.81□□□□□ -0.52
SUB1-201ENST00000265073 PPP2R1AP30153 589 aa11.81□□□□□ -0.52
SUB1-201ENST00000265073 CAMSAP1Q5T5Y3 1602 aa11.81□□□□□ -0.52
SUB1-201ENST00000265073 ZBED9Q6R2W3 1325 aa11.81□□□□□ -0.52
SUB1-201ENST00000265073 SLC52A1Q9NWF4 448 aa11.81□□□□□ -0.52
SUB1-201ENST00000265073 EIF3AQ14152 1382 aaKnown RBP11.8□□□□□ -0.52
SUB1-201ENST00000265073 NEUROD2Q15784 382 aa11.8□□□□□ -0.52
SUB1-201ENST00000265073 NCKAP5LQ9HCH0 1330 aa11.79□□□□□ -0.52
SUB1-201ENST00000265073 CDCA8Q53HL2 280 aa11.79□□□□□ -0.52
SUB1-201ENST00000265073 B4GALNT3Q6L9W6 998 aa11.79□□□□□ -0.52
SUB1-201ENST00000265073 MYO5BQ9ULV0 1848 aa11.79□□□□□ -0.52
SUB1-201ENST00000265073 TXNDC2Q86VQ3 553 aa11.79□□□□□ -0.52
SUB1-201ENST00000265073 PARD3Q8TEW0 1356 aa11.79□□□□□ -0.52
SUB1-201ENST00000265073 ADGRB3O60242 1522 aa11.78□□□□□ -0.52
SUB1-201ENST00000265073 ERVK-7P63135 1459 aa11.78□□□□□ -0.52
SUB1-201ENST00000265073 SLC26A8Q96RN1 970 aa11.78□□□□□ -0.52
SUB1-201ENST00000265073 PIK3C2GO75747 1445 aa11.78□□□□□ -0.52
SUB1-201ENST00000265073 LMTK2Q8IWU2 1503 aa11.78□□□□□ -0.52
SUB1-201ENST00000265073 ZMYM3Q14202 1370 aa11.77□□□□□ -0.53
SUB1-201ENST00000265073 GLI2P10070 1586 aa11.77□□□□□ -0.53
SUB1-201ENST00000265073 WDR43Q15061 677 aaKnown RBP eCLIP11.77□□□□□ -0.53
SUB1-201ENST00000265073 GGNBP2Q9H3C7 697 aa11.77□□□□□ -0.53
SUB1-201ENST00000265073 KIF13AQ9H1H9 1805 aa11.77□□□□□ -0.53
SUB1-201ENST00000265073 BRD4O60885 1362 aaPredicted RBP11.76□□□□□ -0.53
SUB1-201ENST00000265073 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.76□□□□□ -0.53
SUB1-201ENST00000265073 RBM33Q96EV2 1170 aaKnown RBP11.76□□□□□ -0.53
SUB1-201ENST00000265073 STAC3Q96MF2 364 aa11.76□□□□□ -0.53
SUB1-201ENST00000265073 RRP7AQ9Y3A4 280 aaKnown RBP11.76□□□□□ -0.53
SUB1-201ENST00000265073 PPM1GO15355 546 aaPredicted RBP11.75□□□□□ -0.53
SUB1-201ENST00000265073 PLIN1O60240 522 aa11.75□□□□□ -0.53
SUB1-201ENST00000265073 MORC1Q86VD1 984 aa11.75□□□□□ -0.53
SUB1-201ENST00000265073 IQGAP1P46940 1657 aa11.75□□□□□ -0.53
SUB1-201ENST00000265073 CLTCQ00610 1675 aaKnown RBP11.75□□□□□ -0.53
SUB1-201ENST00000265073 MYOM2P54296 1465 aa11.74□□□□□ -0.53
SUB1-201ENST00000265073 RPGRIP1LQ68CZ1 1315 aa11.74□□□□□ -0.53
SUB1-201ENST00000265073 PLEKHH1Q9ULM0 1364 aa11.74□□□□□ -0.53
SUB1-201ENST00000265073 NSD3Q9BZ95 1437 aa11.74□□□□□ -0.53
SUB1-201ENST00000265073 PLEKHG5O94827 1062 aa11.73□□□□□ -0.53
SUB1-201ENST00000265073 PIK3C2BO00750 1634 aa11.73□□□□□ -0.53
SUB1-201ENST00000265073 CABP1Q9NZU7 370 aa11.73□□□□□ -0.53
SUB1-201ENST00000265073 CDK19Q9BWU1 502 aa11.72□□□□□ -0.53
SUB1-201ENST00000265073 NUDCQ9Y266 331 aa11.72□□□□□ -0.53
SUB1-201ENST00000265073 EVC2Q86UK5 1308 aa11.72□□□□□ -0.53
SUB1-201ENST00000265073 APAF1O14727 1248 aa11.72□□□□□ -0.53
SUB1-201ENST00000265073 SOX12O15370 315 aa11.72□□□□□ -0.53
SUB1-201ENST00000265073 NEXMIFQ5QGS0 1516 aa11.72□□□□□ -0.53
SUB1-201ENST00000265073 PPLO60437 1756 aa11.72□□□□□ -0.53
SUB1-201ENST00000265073 LTKP29376 864 aa11.71□□□□□ -0.54
SUB1-201ENST00000265073 PREX1Q8TCU6 1659 aa11.71□□□□□ -0.54
SUB1-201ENST00000265073 MTHFSP49914 203 aa11.7□□□□□ -0.54
SUB1-201ENST00000265073 ADGRB1O14514 1584 aa11.7□□□□□ -0.54
SUB1-201ENST00000265073 ARHGAP31Q2M1Z3 1444 aa11.7□□□□□ -0.54
SUB1-201ENST00000265073 LAMC1P11047 1609 aa11.7□□□□□ -0.54
SUB1-201ENST00000265073 LRPPRCP42704 1394 aaKnown RBP11.7□□□□□ -0.54
SUB1-201ENST00000265073 ZRANB1Q9UGI0 708 aa11.69□□□□□ -0.54
SUB1-201ENST00000265073 IFT172Q9UG01 1749 aa11.69□□□□□ -0.54
SUB1-201ENST00000265073 NRXN1Q9ULB1 1477 aa11.69□□□□□ -0.54
SUB1-201ENST00000265073 METP08581 1390 aa11.69□□□□□ -0.54
SUB1-201ENST00000265073 RIMS2Q9UQ26 1411 aa11.69□□□□□ -0.54
SUB1-201ENST00000265073 DMRT2Q9Y5R5 561 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms