RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 PRPF40AO75400 957 aaKnown RBP18.57■□□□□ 0.56
CASC3-201ENST00000264645 BCL11BQ9C0K0 894 aaPredicted RBP18.57■□□□□ 0.56
CASC3-201ENST00000264645 CCDC39Q9UFE4 941 aa18.56■□□□□ 0.56
CASC3-201ENST00000264645 NAP1L2Q9ULW6 460 aaPredicted RBP18.56■□□□□ 0.56
CASC3-201ENST00000264645 ZNF592Q92610 1267 aa18.55■□□□□ 0.56
CASC3-201ENST00000264645 STK26Q9P289 416 aa18.55■□□□□ 0.56
CASC3-201ENST00000264645 AAMPQ13685 434 aa18.54■□□□□ 0.56
CASC3-201ENST00000264645 C8orf34Q49A92 452 aa18.54■□□□□ 0.56
CASC3-201ENST00000264645 CUX1P39880 1505 aa18.54■□□□□ 0.56
CASC3-201ENST00000264645 TCP11L2Q8N4U5 519 aa18.54■□□□□ 0.56
CASC3-201ENST00000264645 RUNDC1Q96C34 613 aa18.53■□□□□ 0.56
CASC3-201ENST00000264645 TRAK1Q9UPV9 953 aa18.53■□□□□ 0.56
CASC3-201ENST00000264645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.52■□□□□ 0.55
CASC3-201ENST00000264645 SLFN5Q08AF3 891 aa18.52■□□□□ 0.55
CASC3-201ENST00000264645 SLC4A10Q6U841 1118 aa18.51■□□□□ 0.55
CASC3-201ENST00000264645 CADPSQ9ULU8 1353 aa18.51■□□□□ 0.55
CASC3-201ENST00000264645 KIF16BQ96L93 1317 aa18.51■□□□□ 0.55
CASC3-201ENST00000264645 XPCQ01831 940 aaPredicted RBP18.51■□□□□ 0.55
CASC3-201ENST00000264645 CHMP3Q9Y3E7 222 aa18.51■□□□□ 0.55
CASC3-201ENST00000264645 FYCO1Q9BQS8 1478 aa18.5■□□□□ 0.55
CASC3-201ENST00000264645 SOX12O15370 315 aa18.5■□□□□ 0.55
CASC3-201ENST00000264645 IGHDP01880 384 aa18.49■□□□□ 0.55
CASC3-201ENST00000264645 RILPL2Q969X0 211 aa18.49■□□□□ 0.55
CASC3-201ENST00000264645 PLEKHG5O94827 1062 aa18.49■□□□□ 0.55
CASC3-201ENST00000264645 HAP1P54257 671 aaPredicted RBP18.49■□□□□ 0.55
CASC3-201ENST00000264645 ZHX1Q9UKY1 873 aaPredicted RBP18.49■□□□□ 0.55
CASC3-201ENST00000264645 MAP3K1Q13233 1512 aa18.48■□□□□ 0.55
CASC3-201ENST00000264645 REC8O95072 547 aa18.48■□□□□ 0.55
CASC3-201ENST00000264645 DUSP27Q5VZP5 1158 aa18.48■□□□□ 0.55
CASC3-201ENST00000264645 HMMRO75330 724 aa18.48■□□□□ 0.55
CASC3-201ENST00000264645 FGD5Q6ZNL6 1462 aa18.47■□□□□ 0.55
CASC3-201ENST00000264645 K7ELQ4 463 aaPredicted RBP18.47■□□□□ 0.55
CASC3-201ENST00000264645 HMGN5P82970 282 aaKnown RBP18.47■□□□□ 0.55
CASC3-201ENST00000264645 TNPO1Q92973 898 aaKnown RBP18.46■□□□□ 0.55
CASC3-201ENST00000264645 DIAPH3Q9NSV4 1193 aa18.46■□□□□ 0.55
CASC3-201ENST00000264645 CIZ1Q9ULV3 898 aaPredicted RBP18.46■□□□□ 0.55
CASC3-201ENST00000264645 ANKRD30BQ9BXX2 1392 aa18.46■□□□□ 0.55
CASC3-201ENST00000264645 ANKRD50Q9ULJ7 1429 aa18.46■□□□□ 0.55
CASC3-201ENST00000264645 CDC45O75419 566 aa18.45■□□□□ 0.54
CASC3-201ENST00000264645 RIPK4P57078 832 aa18.44■□□□□ 0.54
CASC3-201ENST00000264645 TSR2Q969E8 191 aaKnown RBP18.44■□□□□ 0.54
CASC3-201ENST00000264645 TBC1D32Q96NH3 1257 aa18.43■□□□□ 0.54
CASC3-201ENST00000264645 IFT57Q9NWB7 429 aa18.43■□□□□ 0.54
CASC3-201ENST00000264645 EXOSC9Q06265 439 aaKnown RBP18.43■□□□□ 0.54
CASC3-201ENST00000264645 INTS3Q68E01 1043 aaKnown RBP18.43■□□□□ 0.54
CASC3-201ENST00000264645 SEC24BO95487 1268 aa18.42■□□□□ 0.54
CASC3-201ENST00000264645 ESF1Q9H501 851 aaKnown RBP18.42■□□□□ 0.54
CASC3-201ENST00000264645 ANO2Q9NQ90 1003 aa18.42■□□□□ 0.54
CASC3-201ENST00000264645 KANK1Q14678 1352 aa18.42■□□□□ 0.54
CASC3-201ENST00000264645 C1orf115Q9H7X2 142 aa18.42■□□□□ 0.54
CASC3-201ENST00000264645 MBD3O95983 291 aa18.42■□□□□ 0.54
CASC3-201ENST00000264645 KIAA1107Q9UPP5 1409 aa18.42■□□□□ 0.54
CASC3-201ENST00000264645 MTHFSP49914 203 aa18.41■□□□□ 0.54
CASC3-201ENST00000264645 CBX1P83916 185 aa18.41■□□□□ 0.54
CASC3-201ENST00000264645 MVPQ14764 893 aaKnown RBP18.41■□□□□ 0.54
CASC3-201ENST00000264645 HDGFL2Q7Z4V5 671 aaPredicted RBP18.41■□□□□ 0.54
CASC3-201ENST00000264645 RAD54L2Q9Y4B4 1467 aa18.41■□□□□ 0.54
CASC3-201ENST00000264645 TOP2BQ02880 1626 aa18.41■□□□□ 0.54
CASC3-201ENST00000264645 NUTM2DQ5VT03 806 aaPredicted RBP18.41■□□□□ 0.54
CASC3-201ENST00000264645 RNF123Q5XPI4 1314 aa18.41■□□□□ 0.54
CASC3-201ENST00000264645 ATP6V1DQ9Y5K8 247 aa18.41■□□□□ 0.54
CASC3-201ENST00000264645 TSPY26PQ9H489 355 aa18.4■□□□□ 0.54
CASC3-201ENST00000264645 C14orf37Q86TY3 774 aa18.4■□□□□ 0.54
CASC3-201ENST00000264645 SSFA2P28290 1259 aa18.39■□□□□ 0.54
CASC3-201ENST00000264645 NEK4P51957 841 aa18.39■□□□□ 0.54
CASC3-201ENST00000264645 NPM1P06748 294 aaKnown RBP eCLIP18.39■□□□□ 0.53
CASC3-201ENST00000264645 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
CASC3-201ENST00000264645 RABEP1Q15276 862 aa18.39■□□□□ 0.53
CASC3-201ENST00000264645 SYCE3A1L190 88 aa18.38■□□□□ 0.53
CASC3-201ENST00000264645 PLPPR3Q6T4P5 718 aa18.38■□□□□ 0.53
CASC3-201ENST00000264645 GOLGA6L19H0YKK7 550 aa18.38■□□□□ 0.53
CASC3-201ENST00000264645 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.38■□□□□ 0.53
CASC3-201ENST00000264645 KIF3BO15066 747 aa18.38■□□□□ 0.53
CASC3-201ENST00000264645 WWC1Q8IX03 1113 aa18.38■□□□□ 0.53
CASC3-201ENST00000264645 GGT6Q6P531 493 aa18.37■□□□□ 0.53
CASC3-201ENST00000264645 HTATSF1O43719 755 aaKnown RBP18.37■□□□□ 0.53
CASC3-201ENST00000264645 RTF1Q92541 710 aaKnown RBP18.37■□□□□ 0.53
CASC3-201ENST00000264645 BECN2A8MW95 431 aa18.36■□□□□ 0.53
CASC3-201ENST00000264645 RSPH4AQ5TD94 716 aa18.36■□□□□ 0.53
CASC3-201ENST00000264645 SPC24Q8NBT2 197 aa18.36■□□□□ 0.53
CASC3-201ENST00000264645 NOB1Q9ULX3 412 aaKnown RBP18.36■□□□□ 0.53
CASC3-201ENST00000264645 LRPPRCP42704 1394 aaKnown RBP18.36■□□□□ 0.53
CASC3-201ENST00000264645 AQRO60306 1485 aaKnown RBP eCLIP18.36■□□□□ 0.537e-7■■■□□ 18.7
CASC3-201ENST00000264645 PTPRKQ15262 1439 aa18.35■□□□□ 0.53
CASC3-201ENST00000264645 VPS37CA5D8V6 355 aaPredicted RBP18.35■□□□□ 0.53
CASC3-201ENST00000264645 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.35■□□□□ 0.53
CASC3-201ENST00000264645 TERF2IPQ9NYB0 399 aa18.34■□□□□ 0.53
CASC3-201ENST00000264645 KIF3AQ9Y496 699 aa18.34■□□□□ 0.53
CASC3-201ENST00000264645 CHD1LQ86WJ1 897 aa18.34■□□□□ 0.53
CASC3-201ENST00000264645 SASS6Q6UVJ0 657 aa18.34■□□□□ 0.53
CASC3-201ENST00000264645 STK31Q9BXU1 1019 aa18.34■□□□□ 0.53
CASC3-201ENST00000264645 RARSP54136 660 aaKnown RBP18.33■□□□□ 0.53
CASC3-201ENST00000264645 ATF7IPQ6VMQ6 1270 aa18.33■□□□□ 0.53
CASC3-201ENST00000264645 NINLQ9Y2I6 1382 aa18.33■□□□□ 0.53
CASC3-201ENST00000264645 NPHP1O15259 732 aa18.32■□□□□ 0.52
CASC3-201ENST00000264645 API5Q9BZZ5 524 aaKnown RBP18.32■□□□□ 0.52
CASC3-201ENST00000264645 RPRD2Q5VT52 1461 aaKnown RBP18.32■□□□□ 0.52
CASC3-201ENST00000264645 CCDC27Q2M243 656 aa18.31■□□□□ 0.52
CASC3-201ENST00000264645 CCAR2Q8N163 923 aaKnown RBP18.31■□□□□ 0.52
CASC3-201ENST00000264645 PDCL2Q8N4E4 241 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms