RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 FYCO1Q9BQS8 1478 aa10.85□□□□□ -0.67
SMARCE1-201ENST00000264640 ZEB1P37275 1124 aaPredicted RBP10.84□□□□□ -0.67
SMARCE1-201ENST00000264640 MNX1P50219 401 aaPredicted RBP10.84□□□□□ -0.67
SMARCE1-201ENST00000264640 THEMISQ8N1K5 641 aaPredicted RBP10.84□□□□□ -0.67
SMARCE1-201ENST00000264640 CFDP1Q9UEE9 299 aaPredicted RBP10.84□□□□□ -0.67
SMARCE1-201ENST00000264640 TIAM1Q13009 1591 aa10.84□□□□□ -0.67
SMARCE1-201ENST00000264640 MIA2Q96PC5 1412 aa10.84□□□□□ -0.67
SMARCE1-201ENST00000264640 ZNF644Q9H582 1327 aaPredicted RBP10.84□□□□□ -0.67
SMARCE1-201ENST00000264640 CCNB3Q8WWL7 1395 aa10.83□□□□□ -0.68
SMARCE1-201ENST00000264640 KIF3BO15066 747 aa10.83□□□□□ -0.68
SMARCE1-201ENST00000264640 CEP152O94986 1710 aa10.83□□□□□ -0.68
SMARCE1-201ENST00000264640 PHLPP1O60346 1717 aa10.82□□□□□ -0.68
SMARCE1-201ENST00000264640 WASHC2CQ9Y4E1 1318 aa10.82□□□□□ -0.68
SMARCE1-201ENST00000264640 MBD5Q9P267 1494 aa10.81□□□□□ -0.68
SMARCE1-201ENST00000264640 DHX29Q7Z478 1369 aaKnown RBP10.81□□□□□ -0.68
SMARCE1-201ENST00000264640 GALR2O43603 387 aaPredicted RBP10.81□□□□□ -0.68
SMARCE1-201ENST00000264640 SCAF11Q99590 1463 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-201ENST00000264640 ABCC3O15438 1527 aa10.79□□□□□ -0.68
SMARCE1-201ENST00000264640 RTEL1-TNFRSF6BF6WH68 1400 aa10.78□□□□□ -0.68
SMARCE1-201ENST00000264640 ERVK-7P63135 1459 aa10.78□□□□□ -0.68
SMARCE1-201ENST00000264640 FAM135BQ49AJ0 1406 aa10.77□□□□□ -0.68
SMARCE1-201ENST00000264640 PAK3O75914 559 aaPredicted RBP10.77□□□□□ -0.69
SMARCE1-201ENST00000264640 PROM2Q8N271 834 aa10.77□□□□□ -0.69
SMARCE1-201ENST00000264640 MAP3K1Q13233 1512 aa10.77□□□□□ -0.69
SMARCE1-201ENST00000264640 NCOA2Q15596 1464 aa10.76□□□□□ -0.69
SMARCE1-201ENST00000264640 CCDC141Q6ZP82 1450 aa10.76□□□□□ -0.69
SMARCE1-201ENST00000264640 UPF1Q92900 1129 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMARCE1-201ENST00000264640 TRIM52Q96A61 297 aa10.75□□□□□ -0.69
SMARCE1-201ENST00000264640 RBM33Q96EV2 1170 aaKnown RBP10.75□□□□□ -0.69
SMARCE1-201ENST00000264640 PHF12Q96QT6 1004 aa10.75□□□□□ -0.69
SMARCE1-201ENST00000264640 PIK3C2BO00750 1634 aa10.75□□□□□ -0.69
SMARCE1-201ENST00000264640 MROH1Q8NDA8 1641 aa10.75□□□□□ -0.69
SMARCE1-201ENST00000264640 MTUS2Q5JR59 1369 aa10.75□□□□□ -0.69
SMARCE1-201ENST00000264640 CAMSAP2Q08AD1 1489 aa10.74□□□□□ -0.69
SMARCE1-201ENST00000264640 LRP6O75581 1613 aa10.74□□□□□ -0.69
SMARCE1-201ENST00000264640 COL16A1Q07092 1604 aaPredicted RBP10.74□□□□□ -0.69
SMARCE1-201ENST00000264640 LTKP29376 864 aa10.74□□□□□ -0.69
SMARCE1-201ENST00000264640 TMEM94Q12767 1356 aa10.74□□□□□ -0.69
SMARCE1-201ENST00000264640 ARHGAP23Q9P227 1491 aa10.74□□□□□ -0.69
SMARCE1-201ENST00000264640 SLIT1O75093 1534 aa10.74□□□□□ -0.69
SMARCE1-201ENST00000264640 EHBP1L1Q8N3D4 1523 aa10.74□□□□□ -0.69
SMARCE1-201ENST00000264640 SRCAPQ6ZRS2 3230 aa10.73□□□□□ -0.69
SMARCE1-201ENST00000264640 LRRC9Q6ZRR7 1453 aa10.72□□□□□ -0.69
SMARCE1-201ENST00000264640 EIF2AK4Q9P2K8 1649 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-201ENST00000264640 TXNDC2Q86VQ3 553 aa10.71□□□□□ -0.69
SMARCE1-201ENST00000264640 JCADQ9P266 1359 aa10.7□□□□□ -0.7
SMARCE1-201ENST00000264640 SHPRHQ149N8 1683 aa10.69□□□□□ -0.7
SMARCE1-201ENST00000264640 ARHGEF5Q12774 1597 aa10.69□□□□□ -0.7
SMARCE1-201ENST00000264640 NWD1Q149M9 1564 aa10.69□□□□□ -0.7
SMARCE1-201ENST00000264640 KDM5AP29375 1690 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-201ENST00000264640 PRDM15P57071 1507 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-201ENST00000264640 MEX3CQ5U5Q3 659 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-201ENST00000264640 PROSER2Q86WR7 435 aaPredicted RBP10.67□□□□□ -0.7
SMARCE1-201ENST00000264640 MYO5BQ9ULV0 1848 aa10.67□□□□□ -0.7
SMARCE1-201ENST00000264640 CEP162Q5TB80 1403 aa10.67□□□□□ -0.7
SMARCE1-201ENST00000264640 SLC26A8Q96RN1 970 aa10.66□□□□□ -0.7
SMARCE1-201ENST00000264640 EID1Q9Y6B2 187 aa10.66□□□□□ -0.7
SMARCE1-201ENST00000264640 NKTRP30414 1462 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-201ENST00000264640 TET3O43151 1660 aa10.66□□□□□ -0.7
SMARCE1-201ENST00000264640 MSH6P52701 1360 aa10.65□□□□□ -0.7
SMARCE1-201ENST00000264640 TMEM2Q9UHN6 1383 aa10.65□□□□□ -0.7
SMARCE1-201ENST00000264640 CHD2O14647 1828 aaKnown RBP10.65□□□□□ -0.7
SMARCE1-201ENST00000264640 MAST1Q9Y2H9 1570 aa10.65□□□□□ -0.7
SMARCE1-201ENST00000264640 EFCAB6Q5THR3 1501 aa10.65□□□□□ -0.7
SMARCE1-201ENST00000264640 POTEB2H3BUK9 544 aa10.65□□□□□ -0.7
SMARCE1-201ENST00000264640 KCNA6P17658 529 aa10.64□□□□□ -0.71
SMARCE1-201ENST00000264640 ZNF772Q68DY9 489 aaPredicted RBP10.64□□□□□ -0.71
SMARCE1-201ENST00000264640 PELP1Q8IZL8 1130 aaKnown RBP10.64□□□□□ -0.71
SMARCE1-201ENST00000264640 OTUD5Q96G74 571 aa10.64□□□□□ -0.71
SMARCE1-201ENST00000264640 SLAIN2Q9P270 581 aa10.63□□□□□ -0.71
SMARCE1-201ENST00000264640 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.63□□□□□ -0.71
SMARCE1-201ENST00000264640 AHDC1Q5TGY3 1603 aaPredicted RBP10.62□□□□□ -0.71
SMARCE1-201ENST00000264640 SPATA31A6Q5VVP1 1343 aa10.62□□□□□ -0.71
SMARCE1-201ENST00000264640 RXRBP28702 533 aa10.62□□□□□ -0.71
SMARCE1-201ENST00000264640 CDK12Q9NYV4 1490 aaPredicted RBP10.61□□□□□ -0.71
SMARCE1-201ENST00000264640 DIP2AQ14689 1571 aa10.61□□□□□ -0.71
SMARCE1-201ENST00000264640 RGS12O14924 1447 aa10.61□□□□□ -0.71
SMARCE1-201ENST00000264640 FGD6Q6ZV73 1430 aa10.61□□□□□ -0.71
SMARCE1-201ENST00000264640 TSPY4P0CV99 314 aa10.61□□□□□ -0.71
SMARCE1-201ENST00000264640 TSPY10P0CW01 314 aa10.61□□□□□ -0.71
SMARCE1-201ENST00000264640 ASTLQ6HA08 431 aaPredicted RBP10.61□□□□□ -0.71
SMARCE1-201ENST00000264640 MS4A3Q96HJ5 214 aa10.61□□□□□ -0.71
SMARCE1-201ENST00000264640 CROCC2H7BZ55 1655 aa10.6□□□□□ -0.71
SMARCE1-201ENST00000264640 ADGRB3O60242 1522 aa10.6□□□□□ -0.71
SMARCE1-201ENST00000264640 NUTM2BA6NNL0 878 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-201ENST00000264640 NUTM2EB1AL46 878 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-201ENST00000264640 NUTM2AQ8IVF1 878 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-201ENST00000264640 SETBP1Q9Y6X0 1596 aa10.6□□□□□ -0.71
SMARCE1-201ENST00000264640 GCC2Q8IWJ2 1684 aa10.6□□□□□ -0.71
SMARCE1-201ENST00000264640 DUOX2Q9NRD8 1548 aa10.59□□□□□ -0.71
SMARCE1-201ENST00000264640 RSPH4AQ5TD94 716 aa10.59□□□□□ -0.71
SMARCE1-201ENST00000264640 ARHGAP31Q2M1Z3 1444 aa10.58□□□□□ -0.72
SMARCE1-201ENST00000264640 BCANQ96GW7 911 aa10.58□□□□□ -0.72
SMARCE1-201ENST00000264640 AFF2P51816 1311 aa10.58□□□□□ -0.72
SMARCE1-201ENST00000264640 ATMINO43313 823 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-201ENST00000264640 PPARGC1BQ86YN6 1023 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-201ENST00000264640 CCDC61Q9Y6R9 512 aa10.57□□□□□ -0.72
SMARCE1-201ENST00000264640 NHSL1Q5SYE7 1610 aa10.56□□□□□ -0.72
SMARCE1-201ENST00000264640 NUTM2DQ5VT03 806 aaPredicted RBP10.56□□□□□ -0.72
SMARCE1-201ENST00000264640 C14orf37Q86TY3 774 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms