RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 CHMP4BQ9H444 224 aaKnown RBP10.81□□□□□ -0.68
PTPN3-201ENST00000262539 ZFYVE16Q7Z3T8 1539 aa10.81□□□□□ -0.68
PTPN3-201ENST00000262539 NCBP3Q53F19 620 aaKnown RBP10.8□□□□□ -0.68
PTPN3-201ENST00000262539 AAMPQ13685 434 aa10.8□□□□□ -0.68
PTPN3-201ENST00000262539 GLI2P10070 1586 aa10.8□□□□□ -0.68
PTPN3-201ENST00000262539 TTC37Q6PGP7 1564 aa10.8□□□□□ -0.68
PTPN3-201ENST00000262539 TRPM2O94759 1503 aa10.8□□□□□ -0.68
PTPN3-201ENST00000262539 CDK11BP21127 795 aaKnown RBP10.8□□□□□ -0.68
PTPN3-201ENST00000262539 SIRT1Q96EB6 747 aa10.8□□□□□ -0.68
PTPN3-201ENST00000262539 ZCCHC11Q5TAX3 1644 aaKnown RBP10.8□□□□□ -0.68
PTPN3-201ENST00000262539 HIRIP3Q9BW71 556 aaPredicted RBP10.79□□□□□ -0.68
PTPN3-201ENST00000262539 ZMYM4Q5VZL5 1548 aa10.79□□□□□ -0.68
PTPN3-201ENST00000262539 CALD1Q05682 793 aaKnown RBP10.78□□□□□ -0.68
PTPN3-201ENST00000262539 AGLP35573 1532 aa10.78□□□□□ -0.68
PTPN3-201ENST00000262539 RAPGEF3O95398 923 aa10.77□□□□□ -0.69
PTPN3-201ENST00000262539 ARXQ96QS3 562 aa10.77□□□□□ -0.69
PTPN3-201ENST00000262539 HSP90AA1P07900 732 aaKnown RBP10.77□□□□□ -0.69
PTPN3-201ENST00000262539 IQGAP3Q86VI3 1631 aa10.76□□□□□ -0.69
PTPN3-201ENST00000262539 EIF5BO60841 1220 aaKnown RBP10.76□□□□□ -0.69
PTPN3-201ENST00000262539 TULP1O00294 542 aaPredicted RBP10.76□□□□□ -0.69
PTPN3-201ENST00000262539 MORC1Q86VD1 984 aa10.76□□□□□ -0.69
PTPN3-201ENST00000262539 PPP4R2Q9NY27 417 aa10.76□□□□□ -0.69
PTPN3-201ENST00000262539 THEMISQ8N1K5 641 aaPredicted RBP10.75□□□□□ -0.69
PTPN3-201ENST00000262539 ERCC6L2Q5T890 1561 aa10.74□□□□□ -0.69
PTPN3-201ENST00000262539 COL17A1Q9UMD9 1497 aaPredicted RBP10.74□□□□□ -0.69
PTPN3-201ENST00000262539 NOS1P29475 1434 aa10.74□□□□□ -0.69
PTPN3-201ENST00000262539 PLA2R1Q13018 1463 aa10.74□□□□□ -0.69
PTPN3-201ENST00000262539 CDC42BPAQ5VT25 1732 aa10.74□□□□□ -0.69
PTPN3-201ENST00000262539 PANK3Q9H999 370 aa10.74□□□□□ -0.69
PTPN3-201ENST00000262539 CFAP70Q5T0N1 1121 aa10.74□□□□□ -0.69
PTPN3-201ENST00000262539 NPHP1O15259 732 aa10.73□□□□□ -0.69
PTPN3-201ENST00000262539 CROCC2H7BZ55 1655 aa10.73□□□□□ -0.69
PTPN3-201ENST00000262539 KDM5CP41229 1560 aa10.73□□□□□ -0.69
PTPN3-201ENST00000262539 TESK2Q96S53 571 aa10.72□□□□□ -0.69
PTPN3-201ENST00000262539 SRPK2P78362 688 aaKnown RBP10.72□□□□□ -0.69
PTPN3-201ENST00000262539 EFCAB6Q5THR3 1501 aa10.71□□□□□ -0.69
PTPN3-201ENST00000262539 NPATQ14207 1427 aa10.71□□□□□ -0.69
PTPN3-201ENST00000262539 NBPF1Q3BBV0 1214 aa10.71□□□□□ -0.69
PTPN3-201ENST00000262539 ZNF692Q9BU19 519 aaPredicted RBP10.71□□□□□ -0.69
PTPN3-201ENST00000262539 INO80Q9ULG1 1556 aaPredicted RBP10.71□□□□□ -0.69
PTPN3-201ENST00000262539 MAPK8IP3Q9UPT6 1336 aa10.71□□□□□ -0.69
PTPN3-201ENST00000262539 HECW2Q9P2P5 1572 aa10.71□□□□□ -0.69
PTPN3-201ENST00000262539 LMOD3Q0VAK6 560 aa10.71□□□□□ -0.69
PTPN3-201ENST00000262539 PNISRQ8TF01 805 aaKnown RBP10.71□□□□□ -0.69
PTPN3-201ENST00000262539 TET3O43151 1660 aa10.71□□□□□ -0.7
PTPN3-201ENST00000262539 PARD3Q8TEW0 1356 aa10.71□□□□□ -0.7
PTPN3-201ENST00000262539 TRHP20396 242 aaPredicted RBP10.7□□□□□ -0.7
PTPN3-201ENST00000262539 IDI1Q13907 227 aa10.7□□□□□ -0.7
PTPN3-201ENST00000262539 FKBP8Q14318 412 aa10.7□□□□□ -0.7
PTPN3-201ENST00000262539 CT47B1P0C2W7 299 aaPredicted RBP10.7□□□□□ -0.7
PTPN3-201ENST00000262539 VWDEQ8N2E2 1590 aa10.69□□□□□ -0.7
PTPN3-201ENST00000262539 PIK3C2GO75747 1445 aa10.69□□□□□ -0.7
PTPN3-201ENST00000262539 ANP32BQ92688 251 aaKnown RBP10.68□□□□□ -0.7
PTPN3-201ENST00000262539 TNRQ92752 1358 aa10.68□□□□□ -0.7
PTPN3-201ENST00000262539 ZNF428Q96B54 188 aa10.68□□□□□ -0.7
PTPN3-201ENST00000262539 MYH16Q9H6N6 1097 aa10.67□□□□□ -0.7
PTPN3-201ENST00000262539 TRAK1Q9UPV9 953 aa10.67□□□□□ -0.7
PTPN3-201ENST00000262539 GOLGA2Q08379 1002 aa10.67□□□□□ -0.7
PTPN3-201ENST00000262539 LAMC1P11047 1609 aa10.66□□□□□ -0.7
PTPN3-201ENST00000262539 ABCC11Q96J66 1382 aa10.66□□□□□ -0.7
PTPN3-201ENST00000262539 E9PSI1 815 aa10.66□□□□□ -0.7
PTPN3-201ENST00000262539 REREQ9P2R6 1566 aa10.66□□□□□ -0.7
PTPN3-201ENST00000262539 LRPPRCP42704 1394 aaKnown RBP10.66□□□□□ -0.7
PTPN3-201ENST00000262539 SMG6Q86US8 1419 aaKnown RBP10.66□□□□□ -0.7
PTPN3-201ENST00000262539 CCDC136Q96JN2 1154 aa10.65□□□□□ -0.7
PTPN3-201ENST00000262539 ADGRF5Q8IZF2 1346 aa10.65□□□□□ -0.7
PTPN3-201ENST00000262539 SALL2Q9Y467 1007 aaPredicted RBP10.65□□□□□ -0.7
PTPN3-201ENST00000262539 ABCC3O15438 1527 aa10.65□□□□□ -0.7
PTPN3-201ENST00000262539 ANKRD36BQ8N2N9 1353 aa10.65□□□□□ -0.71
PTPN3-201ENST00000262539 LMOD2Q6P5Q4 547 aa10.64□□□□□ -0.71
PTPN3-201ENST00000262539 LRRIQ1Q96JM4 1722 aa10.64□□□□□ -0.71
PTPN3-201ENST00000262539 TBX22Q9Y458 520 aa10.64□□□□□ -0.71
PTPN3-201ENST00000262539 POLR3AO14802 1390 aaPredicted RBP10.64□□□□□ -0.71
PTPN3-201ENST00000262539 MLECQ14165 292 aa10.64□□□□□ -0.71
PTPN3-201ENST00000262539 PER1O15534 1290 aaPredicted RBP10.64□□□□□ -0.71
PTPN3-201ENST00000262539 PIK3R4Q99570 1358 aa10.63□□□□□ -0.71
PTPN3-201ENST00000262539 NLRP1Q9C000 1473 aa10.63□□□□□ -0.71
PTPN3-201ENST00000262539 PPP2R1AP30153 589 aa10.63□□□□□ -0.71
PTPN3-201ENST00000262539 CC2D1BQ5T0F9 858 aaKnown RBP10.63□□□□□ -0.71
PTPN3-201ENST00000262539 SUPT16HQ9Y5B9 1047 aaKnown RBP10.63□□□□□ -0.71
PTPN3-201ENST00000262539 UPF2Q9HAU5 1272 aaKnown RBP10.62□□□□□ -0.71
PTPN3-201ENST00000262539 CCDC61Q9Y6R9 512 aa10.62□□□□□ -0.71
PTPN3-201ENST00000262539 CFAP44Q96MT7 982 aa10.62□□□□□ -0.71
PTPN3-201ENST00000262539 CDC42BPBQ9Y5S2 1711 aa10.62□□□□□ -0.71
PTPN3-201ENST00000262539 KDM6BO15054 1643 aa10.62□□□□□ -0.71
PTPN3-201ENST00000262539 RCAN3Q9UKA8 241 aa10.62□□□□□ -0.71
PTPN3-201ENST00000262539 IPO8O15397 1037 aaKnown RBP10.61□□□□□ -0.71
PTPN3-201ENST00000262539 ANP32AP39687 249 aaKnown RBP10.61□□□□□ -0.71
PTPN3-201ENST00000262539 C11orf95C9JLR9 678 aaPredicted RBP10.61□□□□□ -0.71
PTPN3-201ENST00000262539 AMER1Q5JTC6 1135 aaPredicted RBP10.6□□□□□ -0.71
PTPN3-201ENST00000262539 RUNDC1Q96C34 613 aa10.6□□□□□ -0.71
PTPN3-201ENST00000262539 RNF17Q9BXT8 1623 aaKnown RBP10.6□□□□□ -0.71
PTPN3-201ENST00000262539 RIMS2Q9UQ26 1411 aa10.6□□□□□ -0.71
PTPN3-201ENST00000262539 ASXL1Q8IXJ9 1541 aa10.59□□□□□ -0.71
PTPN3-201ENST00000262539 COG3Q96JB2 828 aa10.59□□□□□ -0.71
PTPN3-201ENST00000262539 NRXN1Q9ULB1 1477 aa10.59□□□□□ -0.71
PTPN3-201ENST00000262539 TXNDC2Q86VQ3 553 aa10.58□□□□□ -0.71
PTPN3-201ENST00000262539 ZMYM3Q14202 1370 aa10.58□□□□□ -0.72
PTPN3-201ENST00000262539 ERVK-7P63135 1459 aa10.58□□□□□ -0.72
PTPN3-201ENST00000262539 ADGRB3O60242 1522 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms