RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 DAPK1P53355 1430 aa21.06■□□□□ 0.96
VSX2-201ENST00000261980 ABCC5O15440 1437 aa21.06■□□□□ 0.96
VSX2-201ENST00000261980 TCOF1Q13428 1488 aaKnown RBP21.05■□□□□ 0.96
VSX2-201ENST00000261980 GPATCH8Q9UKJ3 1502 aaKnown RBP21.04■□□□□ 0.96
VSX2-201ENST00000261980 KIAA1211Q6ZU35 1233 aa21.04■□□□□ 0.96
VSX2-201ENST00000261980 FAM13BQ9NYF5 915 aa21.04■□□□□ 0.96
VSX2-201ENST00000261980 KDM5CP41229 1560 aa21.03■□□□□ 0.96
VSX2-201ENST00000261980 GCC2Q8IWJ2 1684 aa21.03■□□□□ 0.96
VSX2-201ENST00000261980 GAS2L3Q86XJ1 694 aa21.03■□□□□ 0.96
VSX2-201ENST00000261980 NUP155O75694 1391 aa21.02■□□□□ 0.96
VSX2-201ENST00000261980 MRE11P49959 708 aa21.02■□□□□ 0.96
VSX2-201ENST00000261980 PZPP20742 1482 aa21.01■□□□□ 0.95
VSX2-201ENST00000261980 RIMBP3CA6NJZ7 1639 aa21■□□□□ 0.95
VSX2-201ENST00000261980 RIMBP3BA6NNM3 1639 aa21■□□□□ 0.95
VSX2-201ENST00000261980 RIMBP3Q9UFD9 1639 aa21■□□□□ 0.95
VSX2-201ENST00000261980 KIAA1107Q9UPP5 1409 aa20.99■□□□□ 0.95
VSX2-201ENST00000261980 DISP3Q9P2K9 1392 aa20.99■□□□□ 0.95
VSX2-201ENST00000261980 SLFN5Q08AF3 891 aa20.98■□□□□ 0.95
VSX2-201ENST00000261980 TBC1D32Q96NH3 1257 aa20.98■□□□□ 0.95
VSX2-201ENST00000261980 CAMSAP2Q08AD1 1489 aa20.98■□□□□ 0.95
VSX2-201ENST00000261980 HNRNPMP52272 730 aaKnown RBP eCLIP20.97■□□□□ 0.95
VSX2-201ENST00000261980 POLR1AO95602 1720 aaPredicted RBP20.97■□□□□ 0.95
VSX2-201ENST00000261980 PRDM10Q9NQV6 1147 aa20.97■□□□□ 0.95
VSX2-201ENST00000261980 RRP7AQ9Y3A4 280 aaKnown RBP20.97■□□□□ 0.95
VSX2-201ENST00000261980 MBD5Q9P267 1494 aa20.96■□□□□ 0.95
VSX2-201ENST00000261980 PDZRN3Q9UPQ7 1066 aa20.96■□□□□ 0.95
VSX2-201ENST00000261980 PCDHB15Q9Y5E8 787 aa20.95■□□□□ 0.94
VSX2-201ENST00000261980 PPP2R1AP30153 589 aa20.95■□□□□ 0.94
VSX2-201ENST00000261980 ABCC2Q92887 1545 aa20.95■□□□□ 0.94
VSX2-201ENST00000261980 TRHP20396 242 aaPredicted RBP20.94■□□□□ 0.94
VSX2-201ENST00000261980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.94
VSX2-201ENST00000261980 KNSTRNQ9Y448 316 aa20.94■□□□□ 0.94
VSX2-201ENST00000261980 BLMP54132 1417 aaPredicted RBP20.94■□□□□ 0.94
VSX2-201ENST00000261980 ABCC10Q5T3U5 1492 aa20.93■□□□□ 0.94
VSX2-201ENST00000261980 CHMP5Q9NZZ3 219 aa20.93■□□□□ 0.94
VSX2-201ENST00000261980 MAPK8IP3Q9UPT6 1336 aa20.92■□□□□ 0.94
VSX2-201ENST00000261980 R3HCC1Q9Y3T6 440 aaKnown RBP20.92■□□□□ 0.94
VSX2-201ENST00000261980 NPM1P06748 294 aaKnown RBP eCLIP20.91■□□□□ 0.94
VSX2-201ENST00000261980 PDCL3Q9H2J4 239 aa20.91■□□□□ 0.94
VSX2-201ENST00000261980 ADCY10Q96PN6 1610 aa20.91■□□□□ 0.94
VSX2-201ENST00000261980 C22orf23Q9BZE7 217 aa20.91■□□□□ 0.94
VSX2-201ENST00000261980 RLBP1P12271 317 aa20.9■□□□□ 0.94
VSX2-201ENST00000261980 ZHX1Q9UKY1 873 aaPredicted RBP20.9■□□□□ 0.94
VSX2-201ENST00000261980 RALGAPBQ86X10 1494 aa20.9■□□□□ 0.94
VSX2-201ENST00000261980 TNNT2P45379 298 aaPredicted RBP20.9■□□□□ 0.94
VSX2-201ENST00000261980 ITSN2Q9NZM3 1697 aa20.89■□□□□ 0.93
VSX2-201ENST00000261980 CDC42BPAQ5VT25 1732 aa20.89■□□□□ 0.93
VSX2-201ENST00000261980 ZMYM4Q5VZL5 1548 aa20.89■□□□□ 0.93
VSX2-201ENST00000261980 ROCK1Q13464 1354 aa20.88■□□□□ 0.93
VSX2-201ENST00000261980 DNMT1P26358 1616 aaKnown RBP20.88■□□□□ 0.93
VSX2-201ENST00000261980 CENPJQ9HC77 1338 aaPredicted RBP20.87■□□□□ 0.93
VSX2-201ENST00000261980 NLRP1Q9C000 1473 aa20.86■□□□□ 0.93
VSX2-201ENST00000261980 TSPY4P0CV99 314 aa20.86■□□□□ 0.93
VSX2-201ENST00000261980 TSPY10P0CW01 314 aa20.86■□□□□ 0.93
VSX2-201ENST00000261980 HSCBQ8IWL3 235 aa20.86■□□□□ 0.93
VSX2-201ENST00000261980 TESK2Q96S53 571 aa20.86■□□□□ 0.93
VSX2-201ENST00000261980 ZNF521Q96K83 1311 aa20.86■□□□□ 0.93
VSX2-201ENST00000261980 NCLP19338 710 aaKnown RBP20.85■□□□□ 0.93
VSX2-201ENST00000261980 TNPO1Q92973 898 aaKnown RBP20.85■□□□□ 0.93
VSX2-201ENST00000261980 TMF1P82094 1093 aa20.85■□□□□ 0.93
VSX2-201ENST00000261980 EIF3AQ14152 1382 aaKnown RBP20.84■□□□□ 0.93
VSX2-201ENST00000261980 CGNL1Q0VF96 1302 aa20.84■□□□□ 0.93
VSX2-201ENST00000261980 TPM2P07951 284 aa20.84■□□□□ 0.93
VSX2-201ENST00000261980 RIPK4P57078 832 aa20.84■□□□□ 0.93
VSX2-201ENST00000261980 MSNP26038 577 aaKnown RBP20.83■□□□□ 0.92
VSX2-201ENST00000261980 XPCQ01831 940 aaPredicted RBP20.83■□□□□ 0.92
VSX2-201ENST00000261980 ZCCHC11Q5TAX3 1644 aaKnown RBP20.82■□□□□ 0.92
VSX2-201ENST00000261980 PRDM4Q9UKN5 801 aa20.82■□□□□ 0.92
VSX2-201ENST00000261980 TTC37Q6PGP7 1564 aa20.82■□□□□ 0.92
VSX2-201ENST00000261980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.81■□□□□ 0.92
VSX2-201ENST00000261980 DDX11L8A8MPP1 907 aa20.81■□□□□ 0.92
VSX2-201ENST00000261980 ARHGAP5Q13017 1502 aa20.8■□□□□ 0.92
VSX2-201ENST00000261980 HSP90AB1P08238 724 aaKnown RBP20.8■□□□□ 0.92
VSX2-201ENST00000261980 NASPP49321 788 aaPredicted RBP20.8■□□□□ 0.92
VSX2-201ENST00000261980 ANKRD50Q9ULJ7 1429 aa20.8■□□□□ 0.92
VSX2-201ENST00000261980 E9PSI1 815 aa20.78■□□□□ 0.92
VSX2-201ENST00000261980 FAM69CQ0P6D2 419 aa20.78■□□□□ 0.92
VSX2-201ENST00000261980 ANKRD30AQ9BXX3 1397 aa20.78■□□□□ 0.92
VSX2-201ENST00000261980 MPNDQ8N594 471 aa20.78■□□□□ 0.92
VSX2-201ENST00000261980 JARID2Q92833 1246 aaPredicted RBP20.77■□□□□ 0.92
VSX2-201ENST00000261980 UHRF1BP1Q6BDS2 1440 aa20.77■□□□□ 0.92
VSX2-201ENST00000261980 UHRF1BP1LA0JNW5 1464 aa20.77■□□□□ 0.92
VSX2-201ENST00000261980 NKTRP30414 1462 aaKnown RBP20.77■□□□□ 0.92
VSX2-201ENST00000261980 C9orf84Q5VXU9 1444 aa20.77■□□□□ 0.92
VSX2-201ENST00000261980 CDC42BPBQ9Y5S2 1711 aa20.77■□□□□ 0.92
VSX2-201ENST00000261980 ANP32BQ92688 251 aaKnown RBP20.76■□□□□ 0.91
VSX2-201ENST00000261980 PDE3AQ14432 1141 aa20.75■□□□□ 0.91
VSX2-201ENST00000261980 PMFBP1Q8TBY8 1022 aa20.75■□□□□ 0.91
VSX2-201ENST00000261980 RBM42Q9BTD8 480 aaKnown RBP20.75■□□□□ 0.91
VSX2-201ENST00000261980 SAMD9LQ8IVG5 1584 aa20.74■□□□□ 0.91
VSX2-201ENST00000261980 UQCRHLA0A096LP55 91 aa20.74■□□□□ 0.91
VSX2-201ENST00000261980 UQCRHP07919 91 aa20.74■□□□□ 0.91
VSX2-201ENST00000261980 CALD1Q05682 793 aaKnown RBP20.74■□□□□ 0.91
VSX2-201ENST00000261980 ZSCAN30Q86W11 494 aa20.74■□□□□ 0.91
VSX2-201ENST00000261980 AMER1Q5JTC6 1135 aaPredicted RBP20.73■□□□□ 0.91
VSX2-201ENST00000261980 DDX49Q9Y6V7 483 aaKnown RBP20.73■□□□□ 0.91
VSX2-201ENST00000261980 CD2BP2O95400 341 aaKnown RBP20.73■□□□□ 0.91
VSX2-201ENST00000261980 ZNF692Q9BU19 519 aaPredicted RBP20.73■□□□□ 0.91
VSX2-201ENST00000261980 SSFA2P28290 1259 aa20.73■□□□□ 0.91
VSX2-201ENST00000261980 TRMT2AQ8IZ69 625 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms