RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 PBRM1Q86U86 1689 aa12.8□□□□□ -0.36
SEMA6A-201ENST00000257414 TRIM44Q96DX7 344 aaPredicted RBP12.79□□□□□ -0.36
SEMA6A-201ENST00000257414 GZF1Q9H116 711 aaPredicted RBP12.79□□□□□ -0.36
SEMA6A-201ENST00000257414 PNNQ9H307 717 aaKnown RBP12.79□□□□□ -0.36
SEMA6A-201ENST00000257414 RNF123Q5XPI4 1314 aa12.79□□□□□ -0.36
SEMA6A-201ENST00000257414 PARD3Q8TEW0 1356 aa12.79□□□□□ -0.36
SEMA6A-201ENST00000257414 PLEKHH2Q8IVE3 1493 aa12.79□□□□□ -0.36
SEMA6A-201ENST00000257414 IL27Q8NEV9 243 aa12.79□□□□□ -0.36
SEMA6A-201ENST00000257414 GOLGA6L22H0YM25 854 aa12.78□□□□□ -0.36
SEMA6A-201ENST00000257414 IPO8O15397 1037 aaKnown RBP12.78□□□□□ -0.36
SEMA6A-201ENST00000257414 RUNDC1Q96C34 613 aa12.77□□□□□ -0.36
SEMA6A-201ENST00000257414 LRPPRCP42704 1394 aaKnown RBP12.77□□□□□ -0.36
SEMA6A-201ENST00000257414 ARHGEF12Q9NZN5 1544 aa12.77□□□□□ -0.37
SEMA6A-201ENST00000257414 ATP10BO94823 1461 aa12.77□□□□□ -0.37
SEMA6A-201ENST00000257414 PRAG1Q86YV5 1406 aa12.77□□□□□ -0.37
SEMA6A-201ENST00000257414 SLFN5Q08AF3 891 aa12.76□□□□□ -0.37
SEMA6A-201ENST00000257414 UHRF1BP1Q6BDS2 1440 aa12.76□□□□□ -0.37
SEMA6A-201ENST00000257414 ZKSCAN2Q63HK3 967 aa12.76□□□□□ -0.37
SEMA6A-201ENST00000257414 CHMP4BQ9H444 224 aaKnown RBP12.76□□□□□ -0.37
SEMA6A-201ENST00000257414 DENND4BO75064 1496 aaPredicted RBP12.76□□□□□ -0.37
SEMA6A-201ENST00000257414 KDM5BQ9UGL1 1544 aa12.75□□□□□ -0.37
SEMA6A-201ENST00000257414 ADGRL2O95490 1459 aa12.75□□□□□ -0.37
SEMA6A-201ENST00000257414 DUSP27Q5VZP5 1158 aa12.75□□□□□ -0.37
SEMA6A-201ENST00000257414 FRAT2O75474 233 aaPredicted RBP12.75□□□□□ -0.37
SEMA6A-201ENST00000257414 TARBP1Q13395 1621 aaKnown RBP12.75□□□□□ -0.37
SEMA6A-201ENST00000257414 HDGFL2Q7Z4V5 671 aaPredicted RBP12.74□□□□□ -0.37
SEMA6A-201ENST00000257414 TCP11L2Q8N4U5 519 aa12.74□□□□□ -0.37
SEMA6A-201ENST00000257414 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
SEMA6A-201ENST00000257414 PDE3AQ14432 1141 aa12.74□□□□□ -0.37
SEMA6A-201ENST00000257414 NAP1L5Q96NT1 182 aaPredicted RBP12.74□□□□□ -0.37
SEMA6A-201ENST00000257414 FAM135AQ9P2D6 1515 aa12.73□□□□□ -0.37
SEMA6A-201ENST00000257414 TESK2Q96S53 571 aa12.73□□□□□ -0.37
SEMA6A-201ENST00000257414 BRPF3Q9ULD4 1205 aa12.73□□□□□ -0.37
SEMA6A-201ENST00000257414 PER1O15534 1290 aaPredicted RBP12.73□□□□□ -0.37
SEMA6A-201ENST00000257414 EVC2Q86UK5 1308 aa12.73□□□□□ -0.37
SEMA6A-201ENST00000257414 MTHFSP49914 203 aa12.72□□□□□ -0.37
SEMA6A-201ENST00000257414 TMEM132EQ6IEE7 984 aa12.72□□□□□ -0.37
SEMA6A-201ENST00000257414 TERF2IPQ9NYB0 399 aa12.72□□□□□ -0.37
SEMA6A-201ENST00000257414 SHANK2Q9UPX8 1470 aa12.72□□□□□ -0.37
SEMA6A-201ENST00000257414 DZIP1LQ8IYY4 767 aaKnown RBP12.71□□□□□ -0.37
SEMA6A-201ENST00000257414 GOLGA6L3A6NEY3 463 aa12.71□□□□□ -0.38
SEMA6A-201ENST00000257414 SLC12A5Q9H2X9 1139 aa12.71□□□□□ -0.38
SEMA6A-201ENST00000257414 SCAPERQ9BY12 1400 aa12.7□□□□□ -0.38
SEMA6A-201ENST00000257414 GLIPR1L2Q4G1C9 344 aa12.7□□□□□ -0.38
SEMA6A-201ENST00000257414 ADGBQ8N7X0 1667 aa12.69□□□□□ -0.38
SEMA6A-201ENST00000257414 CASC1Q6TDU7 716 aa12.69□□□□□ -0.38
SEMA6A-201ENST00000257414 VGFO15240 615 aaPredicted RBP12.68□□□□□ -0.38
SEMA6A-201ENST00000257414 LRRIQ1Q96JM4 1722 aa12.68□□□□□ -0.38
SEMA6A-201ENST00000257414 KDM5CP41229 1560 aa12.68□□□□□ -0.38
SEMA6A-201ENST00000257414 PDZRN3Q9UPQ7 1066 aa12.68□□□□□ -0.38
SEMA6A-201ENST00000257414 AAMPQ13685 434 aa12.68□□□□□ -0.38
SEMA6A-201ENST00000257414 WWC1Q8IX03 1113 aa12.68□□□□□ -0.38
SEMA6A-201ENST00000257414 SYCP2Q9BX26 1530 aa12.68□□□□□ -0.38
SEMA6A-201ENST00000257414 GBP4Q96PP9 640 aa12.68□□□□□ -0.38
SEMA6A-201ENST00000257414 DDX19BQ9UMR2 479 aa12.68□□□□□ -0.38
SEMA6A-201ENST00000257414 NKTRP30414 1462 aaKnown RBP12.67□□□□□ -0.38
SEMA6A-201ENST00000257414 EIF4G3O43432 1585 aaKnown RBP12.67□□□□□ -0.38
SEMA6A-201ENST00000257414 AMER1Q5JTC6 1135 aaPredicted RBP12.67□□□□□ -0.38
SEMA6A-201ENST00000257414 PLPPR3Q6T4P5 718 aa12.67□□□□□ -0.38
SEMA6A-201ENST00000257414 COL17A1Q9UMD9 1497 aaPredicted RBP12.67□□□□□ -0.38
SEMA6A-201ENST00000257414 MINK1Q8N4C8 1332 aaPredicted RBP12.66□□□□□ -0.38
SEMA6A-201ENST00000257414 CALD1Q05682 793 aaKnown RBP12.66□□□□□ -0.38
SEMA6A-201ENST00000257414 SCAF11Q99590 1463 aaKnown RBP12.66□□□□□ -0.38
SEMA6A-201ENST00000257414 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.66□□□□□ -0.38
SEMA6A-201ENST00000257414 APBB1O00213 710 aa12.66□□□□□ -0.38
SEMA6A-201ENST00000257414 GGNBP2Q9H3C7 697 aa12.66□□□□□ -0.38
SEMA6A-201ENST00000257414 FOXD4L1Q9NU39 408 aa12.66□□□□□ -0.38
SEMA6A-201ENST00000257414 PLEKHH1Q9ULM0 1364 aa12.66□□□□□ -0.38
SEMA6A-201ENST00000257414 NINLQ9Y2I6 1382 aa12.66□□□□□ -0.38
SEMA6A-201ENST00000257414 CABP2Q9NPB3 220 aa12.65□□□□□ -0.38
SEMA6A-201ENST00000257414 ELL2O00472 640 aaPredicted RBP12.65□□□□□ -0.38
SEMA6A-201ENST00000257414 RIPK4P57078 832 aa12.65□□□□□ -0.38
SEMA6A-201ENST00000257414 A2MP01023 1474 aa12.65□□□□□ -0.38
SEMA6A-201ENST00000257414 NUP160Q12769 1436 aa12.65□□□□□ -0.39
SEMA6A-201ENST00000257414 C22orf23Q9BZE7 217 aa12.65□□□□□ -0.39
SEMA6A-201ENST00000257414 MBD5Q9P267 1494 aa12.64□□□□□ -0.39
SEMA6A-201ENST00000257414 TSR2Q969E8 191 aaKnown RBP12.64□□□□□ -0.39
SEMA6A-201ENST00000257414 NSD3Q9BZ95 1437 aa12.64□□□□□ -0.39
SEMA6A-201ENST00000257414 ANKRD45Q5TZF3 282 aa12.63□□□□□ -0.39
SEMA6A-201ENST00000257414 CHMP5Q9NZZ3 219 aa12.63□□□□□ -0.39
SEMA6A-201ENST00000257414 SOX12O15370 315 aa12.63□□□□□ -0.39
SEMA6A-201ENST00000257414 DIAPH1O60610 1272 aaKnown RBP12.63□□□□□ -0.39
SEMA6A-201ENST00000257414 EXOSC9Q06265 439 aaKnown RBP12.63□□□□□ -0.39
SEMA6A-201ENST00000257414 WDR63Q8IWG1 891 aa12.63□□□□□ -0.39
SEMA6A-201ENST00000257414 ANO8Q9HCE9 1232 aaPredicted RBP12.63□□□□□ -0.39
SEMA6A-201ENST00000257414 BCORL1Q5H9F3 1711 aa12.63□□□□□ -0.39
SEMA6A-201ENST00000257414 ADGRF5Q8IZF2 1346 aa12.62□□□□□ -0.39
SEMA6A-201ENST00000257414 LNPKQ9C0E8 428 aa12.62□□□□□ -0.39
SEMA6A-201ENST00000257414 MLECQ14165 292 aa12.62□□□□□ -0.39
SEMA6A-201ENST00000257414 EIF2AK4Q9P2K8 1649 aaKnown RBP12.62□□□□□ -0.39
SEMA6A-201ENST00000257414 DDX11L8A8MPP1 907 aa12.61□□□□□ -0.39
SEMA6A-201ENST00000257414 IGHDP01880 384 aa12.61□□□□□ -0.39
SEMA6A-201ENST00000257414 ASXL1Q8IXJ9 1541 aa12.61□□□□□ -0.39
SEMA6A-201ENST00000257414 RARSP54136 660 aaKnown RBP12.61□□□□□ -0.39
SEMA6A-201ENST00000257414 C8orf34Q49A92 452 aa12.61□□□□□ -0.39
SEMA6A-201ENST00000257414 DUOX2Q9NRD8 1548 aa12.6□□□□□ -0.39
SEMA6A-201ENST00000257414 KIF16BQ96L93 1317 aa12.6□□□□□ -0.39
SEMA6A-201ENST00000257414 GPRASP1Q5JY77 1395 aa12.6□□□□□ -0.39
SEMA6A-201ENST00000257414 BLMP54132 1417 aaPredicted RBP12.6□□□□□ -0.39
SEMA6A-201ENST00000257414 HAP1P54257 671 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms