RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 STAC3Q96MF2 364 aa26.36■■□□□ 1.81
TRIM47-201ENST00000254816 PPP6R1Q9UPN7 881 aa26.36■■□□□ 1.81
TRIM47-201ENST00000254816 ADGRF5Q8IZF2 1346 aa26.36■■□□□ 1.81
TRIM47-201ENST00000254816 MYOM2P54296 1465 aa26.36■■□□□ 1.81
TRIM47-201ENST00000254816 IDI1Q13907 227 aa26.35■■□□□ 1.81
TRIM47-201ENST00000254816 ERVK-7P63135 1459 aa26.33■■□□□ 1.81
TRIM47-201ENST00000254816 POLR3GLQ9BT43 218 aa26.33■■□□□ 1.81
TRIM47-201ENST00000254816 KIAA1210Q9ULL0 1709 aa26.32■■□□□ 1.8
TRIM47-201ENST00000254816 IQGAP1P46940 1657 aa26.3■■□□□ 1.8
TRIM47-201ENST00000254816 SLC52A1Q9NWF4 448 aa26.29■■□□□ 1.8
TRIM47-201ENST00000254816 CFAP70Q5T0N1 1121 aa26.28■■□□□ 1.8
TRIM47-201ENST00000254816 ESF1Q9H501 851 aaKnown RBP26.27■■□□□ 1.8
TRIM47-201ENST00000254816 NRXN1Q9ULB1 1477 aa26.27■■□□□ 1.8
TRIM47-201ENST00000254816 TMEM131LA2VDJ0 1609 aa26.27■■□□□ 1.8
TRIM47-201ENST00000254816 ANP32CO43423 234 aa26.27■■□□□ 1.8
TRIM47-201ENST00000254816 NUTM2DQ5VT03 806 aaPredicted RBP26.27■■□□□ 1.8
TRIM47-201ENST00000254816 NEXMIFQ5QGS0 1516 aa26.25■■□□□ 1.79
TRIM47-201ENST00000254816 SPATA31D1Q6ZQQ2 1576 aa26.24■■□□□ 1.79
TRIM47-201ENST00000254816 RPGRIP1LQ68CZ1 1315 aa26.24■■□□□ 1.79
TRIM47-201ENST00000254816 ZMYM3Q14202 1370 aa26.23■■□□□ 1.79
TRIM47-201ENST00000254816 PIK3C2GO75747 1445 aa26.21■■□□□ 1.79
TRIM47-201ENST00000254816 SCAF11Q99590 1463 aaKnown RBP26.2■■□□□ 1.79
TRIM47-201ENST00000254816 TESK2Q96S53 571 aa26.2■■□□□ 1.78
TRIM47-201ENST00000254816 SENP3Q9H4L4 574 aaPredicted RBP26.16■■□□□ 1.78
TRIM47-201ENST00000254816 STAG3Q9UJ98 1225 aa26.16■■□□□ 1.78
TRIM47-201ENST00000254816 DISP3Q9P2K9 1392 aa26.16■■□□□ 1.78
TRIM47-201ENST00000254816 VGFO15240 615 aaPredicted RBP26.14■■□□□ 1.77
TRIM47-201ENST00000254816 SETBP1Q9Y6X0 1596 aa26.13■■□□□ 1.77
TRIM47-201ENST00000254816 C14orf93Q9H972 538 aaKnown RBP26.13■■□□□ 1.77
TRIM47-201ENST00000254816 FER1L4A9Z1Z3 1794 aa26.12■■□□□ 1.77
TRIM47-201ENST00000254816 TMEM132EQ6IEE7 984 aa26.1■■□□□ 1.77
TRIM47-201ENST00000254816 ADGRB1O14514 1584 aa26.09■■□□□ 1.77
TRIM47-201ENST00000254816 TMF1P82094 1093 aa26.09■■□□□ 1.77
TRIM47-201ENST00000254816 A2ML1A8K2U0 1454 aa26.09■■□□□ 1.77
TRIM47-201ENST00000254816 EIF3AQ14152 1382 aaKnown RBP26.08■■□□□ 1.77
TRIM47-201ENST00000254816 CEBPAP49715 358 aaPredicted RBP26.07■■□□□ 1.76
TRIM47-201ENST00000254816 ZFYVE9O95405 1425 aa26.07■■□□□ 1.76
TRIM47-201ENST00000254816 C3P01024 1663 aa26.07■■□□□ 1.76
TRIM47-201ENST00000254816 CCER2I3L3R5 266 aa26.07■■□□□ 1.76
TRIM47-201ENST00000254816 TNRQ92752 1358 aa26.06■■□□□ 1.76
TRIM47-201ENST00000254816 PLPPR3Q6T4P5 718 aa26.05■■□□□ 1.76
TRIM47-201ENST00000254816 CNGB1Q14028 1251 aaPredicted RBP26.05■■□□□ 1.76
TRIM47-201ENST00000254816 TRAK1Q9UPV9 953 aa26.04■■□□□ 1.76
TRIM47-201ENST00000254816 PRKRIP1Q9H875 184 aaPredicted RBP26.03■■□□□ 1.76
TRIM47-201ENST00000254816 MYO3AQ8NEV4 1616 aa26.03■■□□□ 1.76
TRIM47-201ENST00000254816 RIMS2Q9UQ26 1411 aa26■■□□□ 1.75
TRIM47-201ENST00000254816 UBR1Q8IWV7 1749 aa25.99■■□□□ 1.75
TRIM47-201ENST00000254816 QRICH2Q9H0J4 1663 aa25.99■■□□□ 1.75
TRIM47-201ENST00000254816 ASXL1Q8IXJ9 1541 aa25.99■■□□□ 1.75
TRIM47-201ENST00000254816 ARHGEF28Q8N1W1 1705 aaKnown RBP25.98■■□□□ 1.75
TRIM47-201ENST00000254816 ALKQ9UM73 1620 aa25.95■■□□□ 1.75
TRIM47-201ENST00000254816 CENPJQ9HC77 1338 aaPredicted RBP25.95■■□□□ 1.74
TRIM47-201ENST00000254816 KDM5AP29375 1690 aaKnown RBP25.95■■□□□ 1.74
TRIM47-201ENST00000254816 CCDC184Q52MB2 194 aa25.93■■□□□ 1.74
TRIM47-201ENST00000254816 MYOM1P52179 1685 aa25.92■■□□□ 1.74
TRIM47-201ENST00000254816 RIMS1Q86UR5 1692 aaKnown RBP25.92■■□□□ 1.74
TRIM47-201ENST00000254816 STK26Q9P289 416 aa25.92■■□□□ 1.74
TRIM47-201ENST00000254816 PANK3Q9H999 370 aa25.91■■□□□ 1.74
TRIM47-201ENST00000254816 CDCA8Q53HL2 280 aa25.9■■□□□ 1.74
TRIM47-201ENST00000254816 SETD1AO15047 1707 aaKnown RBP25.89■■□□□ 1.74
TRIM47-201ENST00000254816 NRXN3Q9Y4C0 1643 aa25.88■■□□□ 1.73
TRIM47-201ENST00000254816 NLRP1Q9C000 1473 aa25.88■■□□□ 1.73
TRIM47-201ENST00000254816 SBNO2Q9Y2G9 1366 aa25.87■■□□□ 1.73
TRIM47-201ENST00000254816 PER1O15534 1290 aaPredicted RBP25.87■■□□□ 1.73
TRIM47-201ENST00000254816 PTPRMP28827 1452 aa25.87■■□□□ 1.73
TRIM47-201ENST00000254816 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.85■■□□□ 1.73
TRIM47-201ENST00000254816 YTHDC2Q9H6S0 1430 aaKnown RBP25.85■■□□□ 1.73
TRIM47-201ENST00000254816 TMEM2Q9UHN6 1383 aa25.85■■□□□ 1.73
TRIM47-201ENST00000254816 SAFB2Q14151 953 aaKnown RBP eCLIP25.85■■□□□ 1.73
TRIM47-201ENST00000254816 SLC24A1O60721 1099 aa25.84■■□□□ 1.73
TRIM47-201ENST00000254816 MRS2Q9HD23 443 aa25.82■■□□□ 1.72
TRIM47-201ENST00000254816 ADAMTSL3P82987 1691 aa25.82■■□□□ 1.72
TRIM47-201ENST00000254816 HDGFP51858 240 aaKnown RBP25.8■■□□□ 1.72
TRIM47-201ENST00000254816 PELP1Q8IZL8 1130 aaKnown RBP25.79■■□□□ 1.72
TRIM47-201ENST00000254816 BCANQ96GW7 911 aa25.79■■□□□ 1.72
TRIM47-201ENST00000254816 TULP4Q9NRJ4 1543 aa25.78■■□□□ 1.72
TRIM47-201ENST00000254816 LTKP29376 864 aa25.77■■□□□ 1.72
TRIM47-201ENST00000254816 CC2D1BQ5T0F9 858 aaKnown RBP25.77■■□□□ 1.72
TRIM47-201ENST00000254816 PRAM1Q96QH2 718 aa25.77■■□□□ 1.72
TRIM47-201ENST00000254816 KTN1Q86UP2 1357 aaKnown RBP25.76■■□□□ 1.71
TRIM47-201ENST00000254816 METP08581 1390 aa25.75■■□□□ 1.71
TRIM47-201ENST00000254816 POGKQ9P215 609 aa25.75■■□□□ 1.71
TRIM47-201ENST00000254816 RALBP1Q15311 655 aa25.74■■□□□ 1.71
TRIM47-201ENST00000254816 TXNDC2Q86VQ3 553 aa25.73■■□□□ 1.71
TRIM47-201ENST00000254816 FAM9BQ8IZU0 186 aa25.73■■□□□ 1.71
TRIM47-201ENST00000254816 MINK1Q8N4C8 1332 aaPredicted RBP25.72■■□□□ 1.71
TRIM47-201ENST00000254816 PARD3Q8TEW0 1356 aa25.72■■□□□ 1.71
TRIM47-201ENST00000254816 EVC2Q86UK5 1308 aa25.72■■□□□ 1.71
TRIM47-201ENST00000254816 LRPPRCP42704 1394 aaKnown RBP25.71■■□□□ 1.71
TRIM47-201ENST00000254816 KNSTRNQ9Y448 316 aa25.71■■□□□ 1.71
TRIM47-201ENST00000254816 MYBBP1AQ9BQG0 1328 aaKnown RBP25.71■■□□□ 1.71
TRIM47-201ENST00000254816 SLIT1O75093 1534 aa25.71■■□□□ 1.71
TRIM47-201ENST00000254816 TMC1Q8TDI8 760 aa25.7■■□□□ 1.7
TRIM47-201ENST00000254816 CEP170BQ9Y4F5 1589 aaPredicted RBP25.7■■□□□ 1.7
TRIM47-201ENST00000254816 WAPLQ7Z5K2 1190 aa25.7■■□□□ 1.7
TRIM47-201ENST00000254816 CABP2Q9NPB3 220 aa25.7■■□□□ 1.7
TRIM47-201ENST00000254816 ARHGAP23Q9P227 1491 aa25.7■■□□□ 1.7
TRIM47-201ENST00000254816 DLC1Q96QB1 1528 aa25.69■■□□□ 1.7
TRIM47-201ENST00000254816 ADAMTS13Q76LX8 1427 aa25.68■■□□□ 1.7
TRIM47-201ENST00000254816 PLEKHG1Q9ULL1 1385 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms