RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 MRS2Q9HD23 443 aa12.59□□□□□ -0.39
RPA1-201ENST00000254719 RBM19Q9Y4C8 960 aaKnown RBP12.59□□□□□ -0.39
RPA1-201ENST00000254719 NPATQ14207 1427 aa12.59□□□□□ -0.39
RPA1-201ENST00000254719 QRICH2Q9H0J4 1663 aa12.59□□□□□ -0.39
RPA1-201ENST00000254719 ZNF326Q5BKZ1 582 aaKnown RBP12.58□□□□□ -0.4
RPA1-201ENST00000254719 SETBP1Q9Y6X0 1596 aa12.58□□□□□ -0.4
RPA1-201ENST00000254719 NEXMIFQ5QGS0 1516 aa12.58□□□□□ -0.4
RPA1-201ENST00000254719 ABCC3O15438 1527 aa12.57□□□□□ -0.4
RPA1-201ENST00000254719 KDM5AP29375 1690 aaKnown RBP12.57□□□□□ -0.4
RPA1-201ENST00000254719 POGZQ7Z3K3 1410 aa12.57□□□□□ -0.4
RPA1-201ENST00000254719 RGL3Q3MIN7 710 aa12.57□□□□□ -0.4
RPA1-201ENST00000254719 AMER1Q5JTC6 1135 aaPredicted RBP12.57□□□□□ -0.4
RPA1-201ENST00000254719 MLH3Q9UHC1 1453 aa12.56□□□□□ -0.4
RPA1-201ENST00000254719 ZNF521Q96K83 1311 aa12.56□□□□□ -0.4
RPA1-201ENST00000254719 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
RPA1-201ENST00000254719 PIK3C2GO75747 1445 aa12.55□□□□□ -0.4
RPA1-201ENST00000254719 ADGRF5Q8IZF2 1346 aa12.55□□□□□ -0.4
RPA1-201ENST00000254719 TMEM131LA2VDJ0 1609 aa12.54□□□□□ -0.4
RPA1-201ENST00000254719 PRKCSHP14314 528 aaPredicted RBP12.54□□□□□ -0.4
RPA1-201ENST00000254719 CARD14Q9BXL6 1004 aa12.53□□□□□ -0.4
RPA1-201ENST00000254719 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.53□□□□□ -0.45e-6■■□□□ 14.4
RPA1-201ENST00000254719 SCAF11Q99590 1463 aaKnown RBP12.53□□□□□ -0.4
RPA1-201ENST00000254719 PLEKHH1Q9ULM0 1364 aa12.53□□□□□ -0.4
RPA1-201ENST00000254719 NOS1P29475 1434 aa12.52□□□□□ -0.4
RPA1-201ENST00000254719 TULP4Q9NRJ4 1543 aa12.52□□□□□ -0.41
RPA1-201ENST00000254719 EFCAB2Q5VUJ9 269 aa12.52□□□□□ -0.41
RPA1-201ENST00000254719 USP32Q8NFA0 1604 aa12.52□□□□□ -0.41
RPA1-201ENST00000254719 CNGB1Q14028 1251 aaPredicted RBP12.52□□□□□ -0.41
RPA1-201ENST00000254719 PREX1Q8TCU6 1659 aa12.52□□□□□ -0.41
RPA1-201ENST00000254719 MYBBP1AQ9BQG0 1328 aaKnown RBP12.52□□□□□ -0.41
RPA1-201ENST00000254719 CDCA7LQ96GN5 454 aa12.51□□□□□ -0.41
RPA1-201ENST00000254719 GLI2P10070 1586 aa12.51□□□□□ -0.41
RPA1-201ENST00000254719 INSRP06213 1382 aa12.5□□□□□ -0.41
RPA1-201ENST00000254719 SPAG9O60271 1321 aaKnown RBP12.49□□□□□ -0.41
RPA1-201ENST00000254719 NRXN3Q9Y4C0 1643 aa12.49□□□□□ -0.41
RPA1-201ENST00000254719 KTN1Q86UP2 1357 aaKnown RBP12.49□□□□□ -0.41
RPA1-201ENST00000254719 PANK3Q9H999 370 aa12.49□□□□□ -0.41
RPA1-201ENST00000254719 KIF13AQ9H1H9 1805 aa12.49□□□□□ -0.41
RPA1-201ENST00000254719 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
RPA1-201ENST00000254719 CFAP74Q9C0B2 1584 aa12.48□□□□□ -0.41
RPA1-201ENST00000254719 CLTCQ00610 1675 aaKnown RBP12.48□□□□□ -0.41
RPA1-201ENST00000254719 B4GALNT3Q6L9W6 998 aa12.48□□□□□ -0.41
RPA1-201ENST00000254719 CCDC136Q96JN2 1154 aa12.48□□□□□ -0.41
RPA1-201ENST00000254719 DMRT2Q9Y5R5 561 aa12.48□□□□□ -0.41
RPA1-201ENST00000254719 RIMBP3CA6NJZ7 1639 aa12.48□□□□□ -0.41
RPA1-201ENST00000254719 RIMBP3BA6NNM3 1639 aa12.48□□□□□ -0.41
RPA1-201ENST00000254719 RIMBP3Q9UFD9 1639 aa12.48□□□□□ -0.41
RPA1-201ENST00000254719 CD163L1Q9NR16 1453 aa12.48□□□□□ -0.41
RPA1-201ENST00000254719 NBR1Q14596 966 aa12.48□□□□□ -0.41
RPA1-201ENST00000254719 POLR3GLQ9BT43 218 aa12.48□□□□□ -0.41
RPA1-201ENST00000254719 NUDCQ9Y266 331 aa12.47□□□□□ -0.41
RPA1-201ENST00000254719 YEATS2Q9ULM3 1422 aa12.47□□□□□ -0.41
RPA1-201ENST00000254719 ANO8Q9HCE9 1232 aaPredicted RBP12.47□□□□□ -0.41
RPA1-201ENST00000254719 RTN4Q9NQC3 1192 aaKnown RBP12.46□□□□□ -0.41
RPA1-201ENST00000254719 NLRP1Q9C000 1473 aa12.46□□□□□ -0.41
RPA1-201ENST00000254719 DIP2BQ9P265 1576 aa12.45□□□□□ -0.42
RPA1-201ENST00000254719 IQSEC2Q5JU85 1478 aa12.45□□□□□ -0.42
RPA1-201ENST00000254719 CFAP70Q5T0N1 1121 aa12.44□□□□□ -0.42
RPA1-201ENST00000254719 TRMT2AQ8IZ69 625 aaKnown RBP12.44□□□□□ -0.42
RPA1-201ENST00000254719 SKAP1Q86WV1 359 aa12.43□□□□□ -0.42
RPA1-201ENST00000254719 ANKRD26Q9UPS8 1709 aa12.43□□□□□ -0.42
RPA1-201ENST00000254719 RALBP1Q15311 655 aa12.42□□□□□ -0.42
RPA1-201ENST00000254719 PTPRMP28827 1452 aa12.42□□□□□ -0.42
RPA1-201ENST00000254719 CD109Q6YHK3 1445 aa12.42□□□□□ -0.42
RPA1-201ENST00000254719 MYT1LQ9UL68 1186 aa12.42□□□□□ -0.42
RPA1-201ENST00000254719 SBNO2Q9Y2G9 1366 aa12.42□□□□□ -0.42
RPA1-201ENST00000254719 NPC1L1Q9UHC9 1359 aa12.42□□□□□ -0.42
RPA1-201ENST00000254719 ADAMTS8Q9UP79 889 aa12.41□□□□□ -0.42
RPA1-201ENST00000254719 WASHC2CQ9Y4E1 1318 aa12.41□□□□□ -0.42
RPA1-201ENST00000254719 C20orf194Q5TEA3 1177 aa12.41□□□□□ -0.42
RPA1-201ENST00000254719 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.42
RPA1-201ENST00000254719 ADGRB2O60241 1585 aa12.4□□□□□ -0.42
RPA1-201ENST00000254719 VIRMAQ69YN4 1812 aaKnown RBP12.4□□□□□ -0.42
RPA1-201ENST00000254719 PPP2R1AP30153 589 aa12.4□□□□□ -0.43
RPA1-201ENST00000254719 ERICH6BQ5W0A0 696 aa12.4□□□□□ -0.43
RPA1-201ENST00000254719 COL3A1P02461 1466 aaPredicted RBP12.39□□□□□ -0.43
RPA1-201ENST00000254719 KIF3BO15066 747 aa12.39□□□□□ -0.43
RPA1-201ENST00000254719 CC2D1BQ5T0F9 858 aaKnown RBP12.39□□□□□ -0.43
RPA1-201ENST00000254719 NLRP13Q86W25 1043 aa12.39□□□□□ -0.43
RPA1-201ENST00000254719 ARHGAP31Q2M1Z3 1444 aa12.39□□□□□ -0.43
RPA1-201ENST00000254719 NEO1Q92859 1461 aa12.39□□□□□ -0.43
RPA1-201ENST00000254719 RAPGEF3O95398 923 aa12.38□□□□□ -0.43
RPA1-201ENST00000254719 REREQ9P2R6 1566 aa12.37□□□□□ -0.43
RPA1-201ENST00000254719 DUSP27Q5VZP5 1158 aa12.37□□□□□ -0.43
RPA1-201ENST00000254719 TSPOAP1O95153 1857 aa12.36□□□□□ -0.43
RPA1-201ENST00000254719 FANCIQ9NVI1 1328 aa12.36□□□□□ -0.43
RPA1-201ENST00000254719 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.35□□□□□ -0.43
RPA1-201ENST00000254719 EXOC6Q8TAG9 804 aa12.35□□□□□ -0.43
RPA1-201ENST00000254719 PHF23Q9BUL5 403 aaPredicted RBP12.35□□□□□ -0.43
RPA1-201ENST00000254719 RRP1P56182 461 aaKnown RBP12.34□□□□□ -0.43
RPA1-201ENST00000254719 C14orf93Q9H972 538 aaKnown RBP12.34□□□□□ -0.43
RPA1-201ENST00000254719 PLIN1O60240 522 aa12.33□□□□□ -0.44
RPA1-201ENST00000254719 KDM2BQ8NHM5 1336 aa12.33□□□□□ -0.44
RPA1-201ENST00000254719 DAXXQ9UER7 740 aaPredicted RBP12.32□□□□□ -0.44
RPA1-201ENST00000254719 DEKP35659 375 aaKnown RBP12.32□□□□□ -0.44
RPA1-201ENST00000254719 TMC1Q8TDI8 760 aa12.32□□□□□ -0.44
RPA1-201ENST00000254719 MED14O60244 1454 aa12.32□□□□□ -0.44
RPA1-201ENST00000254719 ALKQ9UM73 1620 aa12.31□□□□□ -0.44
RPA1-201ENST00000254719 ZFYVE9O95405 1425 aa12.31□□□□□ -0.44
RPA1-201ENST00000254719 KIF20BQ96Q89 1820 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms