RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 KIAA2012Q0VF49 1180 aa9.5□□□□□ -0.89
USP29-201ENST00000254181 PRKRIP1Q9H875 184 aaPredicted RBP9.5□□□□□ -0.89
USP29-201ENST00000254181 FSD2A1L4K1 749 aa9.49□□□□□ -0.89
USP29-201ENST00000254181 CRBNQ96SW2 442 aa9.49□□□□□ -0.89
USP29-201ENST00000254181 CHMP5Q9NZZ3 219 aa9.49□□□□□ -0.89
USP29-201ENST00000254181 SH3BP1Q9Y3L3 701 aa9.49□□□□□ -0.89
USP29-201ENST00000254181 GTF2A1P52655 376 aaPredicted RBP9.49□□□□□ -0.89
USP29-201ENST00000254181 TSPYL1Q9H0U9 437 aa9.49□□□□□ -0.89
USP29-201ENST00000254181 SMG6Q86US8 1419 aaKnown RBP9.49□□□□□ -0.89
USP29-201ENST00000254181 PEX14O75381 377 aa9.48□□□□□ -0.89
USP29-201ENST00000254181 EIF4G2P78344 907 aaKnown RBP eCLIP9.48□□□□□ -0.89
USP29-201ENST00000254181 TSC1Q92574 1164 aa9.48□□□□□ -0.89
USP29-201ENST00000254181 CALCOCO1Q9P1Z2 691 aa9.48□□□□□ -0.89
USP29-201ENST00000254181 RINLQ6ZS11 566 aa9.48□□□□□ -0.89
USP29-201ENST00000254181 FAM177BA6PVY3 158 aa9.47□□□□□ -0.89
USP29-201ENST00000254181 CADPSQ9ULU8 1353 aa9.47□□□□□ -0.89
USP29-201ENST00000254181 HSCBQ8IWL3 235 aa9.47□□□□□ -0.89
USP29-201ENST00000254181 TMX1Q9H3N1 280 aa9.47□□□□□ -0.89
USP29-201ENST00000254181 KTN1Q86UP2 1357 aaKnown RBP9.47□□□□□ -0.89
USP29-201ENST00000254181 CLIP1P30622 1438 aa9.47□□□□□ -0.89
USP29-201ENST00000254181 PPP1R1BQ9UD71 204 aaPredicted RBP9.47□□□□□ -0.89
USP29-201ENST00000254181 HMGN5P82970 282 aaKnown RBP9.46□□□□□ -0.89
USP29-201ENST00000254181 SEMA3FQ13275 785 aa9.46□□□□□ -0.89
USP29-201ENST00000254181 WDR97A6NE52 1622 aa9.46□□□□□ -0.89
USP29-201ENST00000254181 RGL3Q3MIN7 710 aa9.46□□□□□ -0.89
USP29-201ENST00000254181 TOMM22Q9NS69 142 aa9.46□□□□□ -0.89
USP29-201ENST00000254181 GOLGA6L6A8MZA4 724 aa9.46□□□□□ -0.9
USP29-201ENST00000254181 DDX49Q9Y6V7 483 aaKnown RBP9.46□□□□□ -0.9
USP29-201ENST00000254181 FOXD4Q12950 439 aaPredicted RBP9.45□□□□□ -0.9
USP29-201ENST00000254181 CENPQQ7L2Z9 268 aaPredicted RBP9.45□□□□□ -0.9
USP29-201ENST00000254181 ATP1B4Q9UN42 357 aaPredicted RBP9.45□□□□□ -0.9
USP29-201ENST00000254181 HSPA5P11021 654 aaKnown RBP9.45□□□□□ -0.9
USP29-201ENST00000254181 ARID4AP29374 1257 aaPredicted RBP9.45□□□□□ -0.9
USP29-201ENST00000254181 SKOR2Q2VWA4 1001 aaPredicted RBP9.45□□□□□ -0.9
USP29-201ENST00000254181 GORABQ5T7V8 394 aa9.45□□□□□ -0.9
USP29-201ENST00000254181 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.45□□□□□ -0.9
USP29-201ENST00000254181 TPD52L2O43399 206 aaKnown RBP9.44□□□□□ -0.9
USP29-201ENST00000254181 HSP90AB1P08238 724 aaKnown RBP9.44□□□□□ -0.9
USP29-201ENST00000254181 TERF2IPQ9NYB0 399 aa9.44□□□□□ -0.9
USP29-201ENST00000254181 RAB3GAP2Q9H2M9 1393 aa9.44□□□□□ -0.9
USP29-201ENST00000254181 SLC24A3Q9HC58 644 aa9.43□□□□□ -0.9
USP29-201ENST00000254181 LMOD2Q6P5Q4 547 aa9.43□□□□□ -0.9
USP29-201ENST00000254181 ZBTB12Q9Y330 459 aaPredicted RBP9.43□□□□□ -0.9
USP29-201ENST00000254181 U2AF2P26368 475 aaKnown RBP eCLIP9.43□□□□□ -0.9
USP29-201ENST00000254181 MMP14P50281 582 aa9.43□□□□□ -0.9
USP29-201ENST00000254181 TTC36A6NLP5 189 aa9.42□□□□□ -0.9
USP29-201ENST00000254181 VGFO15240 615 aaPredicted RBP9.42□□□□□ -0.9
USP29-201ENST00000254181 CASC1Q6TDU7 716 aa9.42□□□□□ -0.9
USP29-201ENST00000254181 EP400NLQ6ZTU2 488 aa9.42□□□□□ -0.9
USP29-201ENST00000254181 CCDC39Q9UFE4 941 aa9.42□□□□□ -0.9
USP29-201ENST00000254181 ATP2B3Q16720 1220 aa9.42□□□□□ -0.9
USP29-201ENST00000254181 PPME1Q9Y570 386 aa9.42□□□□□ -0.9
USP29-201ENST00000254181 PANK3Q9H999 370 aa9.41□□□□□ -0.9
USP29-201ENST00000254181 EVI5LQ96CN4 794 aa9.41□□□□□ -0.9
USP29-201ENST00000254181 WDR70Q9NW82 654 aa9.41□□□□□ -0.9
USP29-201ENST00000254181 GOLIM4O00461 696 aa9.41□□□□□ -0.9
USP29-201ENST00000254181 GOLGA6L1Q8N7Z2 621 aa9.41□□□□□ -0.9
USP29-201ENST00000254181 ZCCHC6Q5VYS8 1495 aaKnown RBP9.41□□□□□ -0.9
USP29-201ENST00000254181 C8orf34Q49A92 452 aa9.4□□□□□ -0.9
USP29-201ENST00000254181 RSPH14Q9UHP6 348 aa9.4□□□□□ -0.9
USP29-201ENST00000254181 MKRN3Q13064 507 aaKnown RBP9.4□□□□□ -0.9
USP29-201ENST00000254181 MYCBPQ99417 103 aaPredicted RBP9.4□□□□□ -0.9
USP29-201ENST00000254181 NBPF11Q86T75 865 aa9.4□□□□□ -0.91
USP29-201ENST00000254181 CREBRFQ8IUR6 639 aa9.4□□□□□ -0.91
USP29-201ENST00000254181 EGFL6Q8IUX8 553 aa9.39□□□□□ -0.91
USP29-201ENST00000254181 JARID2Q92833 1246 aaPredicted RBP9.39□□□□□ -0.91
USP29-201ENST00000254181 ANKRD13AQ8IZ07 590 aa9.39□□□□□ -0.91
USP29-201ENST00000254181 ZNF513Q8N8E2 541 aaPredicted RBP9.39□□□□□ -0.91
USP29-201ENST00000254181 ZKSCAN5Q9Y2L8 839 aa9.39□□□□□ -0.91
USP29-201ENST00000254181 TDO2P48775 406 aa9.38□□□□□ -0.91
USP29-201ENST00000254181 SRPK2P78362 688 aaKnown RBP9.38□□□□□ -0.91
USP29-201ENST00000254181 GAS2L3Q86XJ1 694 aa9.38□□□□□ -0.91
USP29-201ENST00000254181 TBC1D2Q9BYX2 928 aa9.38□□□□□ -0.91
USP29-201ENST00000254181 ANKRD62A6NC57 917 aa9.38□□□□□ -0.91
USP29-201ENST00000254181 MLECQ14165 292 aa9.38□□□□□ -0.91
USP29-201ENST00000254181 MYRIPQ8NFW9 859 aa9.38□□□□□ -0.91
USP29-201ENST00000254181 TMX4Q9H1E5 349 aaPredicted RBP9.38□□□□□ -0.91
USP29-201ENST00000254181 DIAPH3Q9NSV4 1193 aa9.38□□□□□ -0.91
USP29-201ENST00000254181 DHX16O60231 1041 aaKnown RBP9.37□□□□□ -0.91
USP29-201ENST00000254181 RNF214Q8ND24 703 aa9.37□□□□□ -0.91
USP29-201ENST00000254181 NOL7Q9UMY1 257 aaKnown RBP9.37□□□□□ -0.91
USP29-201ENST00000254181 KIF4AO95239 1232 aa9.37□□□□□ -0.91
USP29-201ENST00000254181 TSHZ1Q6ZSZ6 1077 aa9.37□□□□□ -0.91
USP29-201ENST00000254181 IRF6O14896 467 aa9.36□□□□□ -0.91
USP29-201ENST00000254181 PRR29P0C7W0 189 aa9.36□□□□□ -0.91
USP29-201ENST00000254181 PNMA2Q9UL42 364 aa9.36□□□□□ -0.91
USP29-201ENST00000254181 PRIMPOLQ96LW4 560 aa9.36□□□□□ -0.91
USP29-201ENST00000254181 DEF6Q9H4E7 631 aa9.36□□□□□ -0.91
USP29-201ENST00000254181 GABPB1Q06547 395 aaPredicted RBP9.36□□□□□ -0.91
USP29-201ENST00000254181 IFNLR1Q8IU57 520 aaPredicted RBP9.36□□□□□ -0.91
USP29-201ENST00000254181 GEMIN8Q9NWZ8 242 aaKnown RBP9.36□□□□□ -0.91
USP29-201ENST00000254181 PSEN1P49768 467 aa9.35□□□□□ -0.91
USP29-201ENST00000254181 NBPF20Q3BBV1 942 aa9.35□□□□□ -0.91
USP29-201ENST00000254181 CAVIN1Q6NZI2 390 aaKnown RBP9.35□□□□□ -0.91
USP29-201ENST00000254181 MICAL1Q8TDZ2 1067 aa9.35□□□□□ -0.91
USP29-201ENST00000254181 CCNB3Q8WWL7 1395 aa9.35□□□□□ -0.91
USP29-201ENST00000254181 GOLGA3Q08378 1498 aa9.35□□□□□ -0.91
USP29-201ENST00000254181 RIOK3O14730 519 aaKnown RBP9.35□□□□□ -0.91
USP29-201ENST00000254181 ZNF500O60304 480 aaPredicted RBP9.35□□□□□ -0.91
USP29-201ENST00000254181 VPS8Q8N3P4 1428 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms