RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 VWDEQ8N2E2 1590 aa21.12■□□□□ 0.97
LRFN1-201ENST00000248668 RNF17Q9BXT8 1623 aaKnown RBP21.12■□□□□ 0.97
LRFN1-201ENST00000248668 POGZQ7Z3K3 1410 aa21.11■□□□□ 0.97
LRFN1-201ENST00000248668 CDCA7LQ96GN5 454 aa21.1■□□□□ 0.97
LRFN1-201ENST00000248668 TRAK1Q9UPV9 953 aa21.08■□□□□ 0.97
LRFN1-201ENST00000248668 TMEM132EQ6IEE7 984 aa21.08■□□□□ 0.97
LRFN1-201ENST00000248668 PPRC1Q5VV67 1664 aaKnown RBP21.08■□□□□ 0.96
LRFN1-201ENST00000248668 EFCAB6Q5THR3 1501 aa21.07■□□□□ 0.96
LRFN1-201ENST00000248668 NOS1P29475 1434 aa21.07■□□□□ 0.96
LRFN1-201ENST00000248668 CDCA8Q53HL2 280 aa21.06■□□□□ 0.96
LRFN1-201ENST00000248668 ERICH6BQ5W0A0 696 aa21.06■□□□□ 0.96
LRFN1-201ENST00000248668 NPATQ14207 1427 aa21.05■□□□□ 0.96
LRFN1-201ENST00000248668 STAC3Q96MF2 364 aa21.05■□□□□ 0.96
LRFN1-201ENST00000248668 EIF3AQ14152 1382 aaKnown RBP21.05■□□□□ 0.96
LRFN1-201ENST00000248668 IQGAP1P46940 1657 aa21.04■□□□□ 0.96
LRFN1-201ENST00000248668 AMER1Q5JTC6 1135 aaPredicted RBP21.04■□□□□ 0.96
LRFN1-201ENST00000248668 ADAMTS8Q9UP79 889 aa21.04■□□□□ 0.96
LRFN1-201ENST00000248668 PPP2R1AP30153 589 aa21.03■□□□□ 0.96
LRFN1-201ENST00000248668 FRMPD1Q5SYB0 1578 aa21.02■□□□□ 0.96
LRFN1-201ENST00000248668 MROH2AA6NES4 1674 aa21.01■□□□□ 0.95
LRFN1-201ENST00000248668 CCDC136Q96JN2 1154 aa21■□□□□ 0.95
LRFN1-201ENST00000248668 MSH5O43196 834 aa21■□□□□ 0.95
LRFN1-201ENST00000248668 ABCA6Q8N139 1617 aa21■□□□□ 0.95
LRFN1-201ENST00000248668 KIF1BO60333 1816 aa21■□□□□ 0.95
LRFN1-201ENST00000248668 MLH3Q9UHC1 1453 aa20.99■□□□□ 0.95
LRFN1-201ENST00000248668 WDR43Q15061 677 aaKnown RBP eCLIP20.99■□□□□ 0.95
LRFN1-201ENST00000248668 HECW2Q9P2P5 1572 aa20.99■□□□□ 0.95
LRFN1-201ENST00000248668 MAP3K4Q9Y6R4 1608 aa20.99■□□□□ 0.95
LRFN1-201ENST00000248668 RCAN3Q9UKA8 241 aa20.98■□□□□ 0.95
LRFN1-201ENST00000248668 SAFB2Q14151 953 aaKnown RBP eCLIP20.98■□□□□ 0.95
LRFN1-201ENST00000248668 ANO8Q9HCE9 1232 aaPredicted RBP20.97■□□□□ 0.95
LRFN1-201ENST00000248668 TNNT2P45379 298 aaPredicted RBP20.96■□□□□ 0.95
LRFN1-201ENST00000248668 CCDC146Q8IYE0 955 aa20.96■□□□□ 0.95
LRFN1-201ENST00000248668 RNF123Q5XPI4 1314 aa20.96■□□□□ 0.95
LRFN1-201ENST00000248668 YEATS2Q9ULM3 1422 aa20.96■□□□□ 0.95
LRFN1-201ENST00000248668 CENPJQ9HC77 1338 aaPredicted RBP20.95■□□□□ 0.94
LRFN1-201ENST00000248668 CARD14Q9BXL6 1004 aa20.95■□□□□ 0.94
LRFN1-201ENST00000248668 PLIN1O60240 522 aa20.95■□□□□ 0.94
LRFN1-201ENST00000248668 MYOM2P54296 1465 aa20.95■□□□□ 0.94
LRFN1-201ENST00000248668 FAM69CQ0P6D2 419 aa20.94■□□□□ 0.94
LRFN1-201ENST00000248668 RRP1P56182 461 aaKnown RBP20.94■□□□□ 0.94
LRFN1-201ENST00000248668 ERVK-7P63135 1459 aa20.94■□□□□ 0.94
LRFN1-201ENST00000248668 CFAP74Q9C0B2 1584 aa20.93■□□□□ 0.94
LRFN1-201ENST00000248668 EXOC6Q8TAG9 804 aa20.93■□□□□ 0.94
LRFN1-201ENST00000248668 LMTK2Q8IWU2 1503 aa20.93■□□□□ 0.94
LRFN1-201ENST00000248668 SLC12A5Q9H2X9 1139 aa20.92■□□□□ 0.94
LRFN1-201ENST00000248668 ABCC3O15438 1527 aa20.92■□□□□ 0.94
LRFN1-201ENST00000248668 IDI1Q13907 227 aa20.91■□□□□ 0.94
LRFN1-201ENST00000248668 STK26Q9P289 416 aa20.91■□□□□ 0.94
LRFN1-201ENST00000248668 C14orf93Q9H972 538 aaKnown RBP20.91■□□□□ 0.94
LRFN1-201ENST00000248668 ASXL1Q8IXJ9 1541 aa20.91■□□□□ 0.94
LRFN1-201ENST00000248668 ADGRB3O60242 1522 aa20.9■□□□□ 0.94
LRFN1-201ENST00000248668 SYNMO15061 1565 aa20.9■□□□□ 0.94
LRFN1-201ENST00000248668 NEO1Q92859 1461 aa20.9■□□□□ 0.94
LRFN1-201ENST00000248668 PDE3BQ13370 1112 aa20.88■□□□□ 0.93
LRFN1-201ENST00000248668 BLMP54132 1417 aaPredicted RBP20.88■□□□□ 0.93
LRFN1-201ENST00000248668 FBXO31Q5XUX0 539 aaPredicted RBP20.88■□□□□ 0.93
LRFN1-201ENST00000248668 KDM5AP29375 1690 aaKnown RBP20.87■□□□□ 0.93
LRFN1-201ENST00000248668 MYOM1P52179 1685 aa20.87■□□□□ 0.93
LRFN1-201ENST00000248668 PIK3C2GO75747 1445 aa20.86■□□□□ 0.93
LRFN1-201ENST00000248668 MLECQ14165 292 aa20.86■□□□□ 0.93
LRFN1-201ENST00000248668 DIP2CQ9Y2E4 1556 aa20.86■□□□□ 0.93
LRFN1-201ENST00000248668 KIAA1210Q9ULL0 1709 aa20.86■□□□□ 0.93
LRFN1-201ENST00000248668 PLEKHH1Q9ULM0 1364 aa20.85■□□□□ 0.93
LRFN1-201ENST00000248668 NRXN1Q9ULB1 1477 aa20.85■□□□□ 0.93
LRFN1-201ENST00000248668 IFT172Q9UG01 1749 aa20.84■□□□□ 0.93
LRFN1-201ENST00000248668 SIGLEC1Q9BZZ2 1709 aa20.84■□□□□ 0.93
LRFN1-201ENST00000248668 VGFO15240 615 aaPredicted RBP20.83■□□□□ 0.93
LRFN1-201ENST00000248668 NEURL4Q96JN8 1562 aa20.83■□□□□ 0.92
LRFN1-201ENST00000248668 APAF1O14727 1248 aa20.83■□□□□ 0.92
LRFN1-201ENST00000248668 CABP2Q9NPB3 220 aa20.82■□□□□ 0.92
LRFN1-201ENST00000248668 CAMSAP1Q5T5Y3 1602 aa20.82■□□□□ 0.92
LRFN1-201ENST00000248668 NSD3Q9BZ95 1437 aa20.81■□□□□ 0.92
LRFN1-201ENST00000248668 RPGRIP1LQ68CZ1 1315 aa20.8■□□□□ 0.92
LRFN1-201ENST00000248668 SLC24A1O60721 1099 aa20.8■□□□□ 0.92
LRFN1-201ENST00000248668 MORC1Q86VD1 984 aa20.8■□□□□ 0.92
LRFN1-201ENST00000248668 STAG3Q9UJ98 1225 aa20.8■□□□□ 0.92
LRFN1-201ENST00000248668 PPLO60437 1756 aa20.79■□□□□ 0.92
LRFN1-201ENST00000248668 TSPOAP1O95153 1857 aa20.78■□□□□ 0.92
LRFN1-201ENST00000248668 NEUROD2Q15784 382 aa20.77■□□□□ 0.92
LRFN1-201ENST00000248668 C20orf194Q5TEA3 1177 aa20.77■□□□□ 0.92
LRFN1-201ENST00000248668 RICTORQ6R327 1708 aa20.77■□□□□ 0.92
LRFN1-201ENST00000248668 ADGRB1O14514 1584 aa20.77■□□□□ 0.92
LRFN1-201ENST00000248668 ZMYM4Q5VZL5 1548 aa20.77■□□□□ 0.91
LRFN1-201ENST00000248668 CRBNQ96SW2 442 aa20.76■□□□□ 0.91
LRFN1-201ENST00000248668 GOLGA2Q08379 1002 aa20.76■□□□□ 0.91
LRFN1-201ENST00000248668 SPINK5Q9NQ38 1064 aaPredicted RBP20.76■□□□□ 0.91
LRFN1-201ENST00000248668 NPC1L1Q9UHC9 1359 aa20.75■□□□□ 0.91
LRFN1-201ENST00000248668 DUSP27Q5VZP5 1158 aa20.75■□□□□ 0.91
LRFN1-201ENST00000248668 SRPK2P78362 688 aaKnown RBP20.75■□□□□ 0.91
LRFN1-201ENST00000248668 MINK1Q8N4C8 1332 aaPredicted RBP20.75■□□□□ 0.91
LRFN1-201ENST00000248668 SBNO2Q9Y2G9 1366 aa20.74■□□□□ 0.91
LRFN1-201ENST00000248668 SLC52A1Q9NWF4 448 aa20.74■□□□□ 0.91
LRFN1-201ENST00000248668 SKAP1Q86WV1 359 aa20.74■□□□□ 0.91
LRFN1-201ENST00000248668 RRP7AQ9Y3A4 280 aaKnown RBP20.73■□□□□ 0.91
LRFN1-201ENST00000248668 DMRT2Q9Y5R5 561 aa20.73■□□□□ 0.91
LRFN1-201ENST00000248668 EVC2Q86UK5 1308 aa20.73■□□□□ 0.91
LRFN1-201ENST00000248668 QRICH2Q9H0J4 1663 aa20.73■□□□□ 0.91
LRFN1-201ENST00000248668 SETBP1Q9Y6X0 1596 aa20.72■□□□□ 0.91
LRFN1-201ENST00000248668 NEXMIFQ5QGS0 1516 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms