RNA–Protein interactions for RNA: ENST00000248444.9

VIL1-201, Transcript of villin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIL1, Length 6,531 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-201ENST00000248444 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
VIL1-201ENST00000248444 TCERG1O14776 1098 aaKnown RBP12.47□□□□□ -0.41
VIL1-201ENST00000248444 APAF1O14727 1248 aa12.46□□□□□ -0.41
VIL1-201ENST00000248444 DRC7Q8IY82 874 aa12.46□□□□□ -0.41
VIL1-201ENST00000248444 RILPL2Q969X0 211 aa12.46□□□□□ -0.41
VIL1-201ENST00000248444 TRIM34Q9BYJ4 488 aa12.46□□□□□ -0.41
VIL1-201ENST00000248444 NOL10Q9BSC4 688 aaKnown RBP12.46□□□□□ -0.41
VIL1-201ENST00000248444 E9PSI1 815 aa12.46□□□□□ -0.42
VIL1-201ENST00000248444 DDX58O95786 925 aaKnown RBP12.46□□□□□ -0.42
VIL1-201ENST00000248444 CFAP70Q5T0N1 1121 aa12.46□□□□□ -0.42
VIL1-201ENST00000248444 VPS37DQ86XT2 251 aa12.46□□□□□ -0.42
VIL1-201ENST00000248444 RAD21O60216 631 aa12.45□□□□□ -0.42
VIL1-201ENST00000248444 TSPYL4Q9UJ04 414 aa12.45□□□□□ -0.42
VIL1-201ENST00000248444 RASSF8Q8NHQ8 419 aa12.45□□□□□ -0.42
VIL1-201ENST00000248444 STAC3Q96MF2 364 aa12.45□□□□□ -0.42
VIL1-201ENST00000248444 PRAM1Q96QH2 718 aa12.45□□□□□ -0.42
VIL1-201ENST00000248444 ANKLE2Q86XL3 938 aa12.45□□□□□ -0.42
VIL1-201ENST00000248444 POGZQ7Z3K3 1410 aa12.45□□□□□ -0.42
VIL1-201ENST00000248444 RRBP1Q9P2E9 1410 aaKnown RBP12.45□□□□□ -0.42
VIL1-201ENST00000248444 ZKSCAN2Q63HK3 967 aa12.44□□□□□ -0.42
VIL1-201ENST00000248444 MARCH6O60337 910 aa12.43□□□□□ -0.42
VIL1-201ENST00000248444 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
VIL1-201ENST00000248444 AIMP1Q12904 312 aaKnown RBP12.43□□□□□ -0.42
VIL1-201ENST00000248444 ANKRD45Q5TZF3 282 aa12.43□□□□□ -0.42
VIL1-201ENST00000248444 HTATSF1O43719 755 aaKnown RBP12.43□□□□□ -0.42
VIL1-201ENST00000248444 FKBP5Q13451 457 aaPredicted RBP12.43□□□□□ -0.42
VIL1-201ENST00000248444 PLEKHH2Q8IVE3 1493 aa12.42□□□□□ -0.42
VIL1-201ENST00000248444 C9orf84Q5VXU9 1444 aa12.42□□□□□ -0.42
VIL1-201ENST00000248444 PLIN1O60240 522 aa12.42□□□□□ -0.42
VIL1-201ENST00000248444 AMOTL1Q8IY63 956 aa12.42□□□□□ -0.42
VIL1-201ENST00000248444 SLC26A8Q96RN1 970 aa12.42□□□□□ -0.42
VIL1-201ENST00000248444 PRKRIP1Q9H875 184 aaPredicted RBP12.42□□□□□ -0.42
VIL1-201ENST00000248444 RBM33Q96EV2 1170 aaKnown RBP12.41□□□□□ -0.42
VIL1-201ENST00000248444 SF3B2Q13435 895 aaKnown RBP12.41□□□□□ -0.42
VIL1-201ENST00000248444 RIC3Q7Z5B4 369 aa12.41□□□□□ -0.42
VIL1-201ENST00000248444 FOXD4L1Q9NU39 408 aa12.41□□□□□ -0.42
VIL1-201ENST00000248444 RUNDC1Q96C34 613 aa12.41□□□□□ -0.42
VIL1-201ENST00000248444 DCAF8L1A6NGE4 600 aa12.4□□□□□ -0.42
VIL1-201ENST00000248444 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
VIL1-201ENST00000248444 CTDP1Q9Y5B0 961 aaPredicted RBP12.4□□□□□ -0.42
VIL1-201ENST00000248444 ERICH3Q5RHP9 1530 aa12.4□□□□□ -0.42
VIL1-201ENST00000248444 SLKQ9H2G2 1235 aaPredicted RBP12.4□□□□□ -0.42
VIL1-201ENST00000248444 HECW1Q76N89 1606 aa12.4□□□□□ -0.42
VIL1-201ENST00000248444 EFCAB5A4FU69 1503 aa12.39□□□□□ -0.43
VIL1-201ENST00000248444 FAM177BA6PVY3 158 aa12.39□□□□□ -0.43
VIL1-201ENST00000248444 TOP2BQ02880 1626 aa12.39□□□□□ -0.43
VIL1-201ENST00000248444 EHBP1L1Q8N3D4 1523 aa12.39□□□□□ -0.43
VIL1-201ENST00000248444 IFIT2P09913 472 aaKnown RBP12.39□□□□□ -0.43
VIL1-201ENST00000248444 PPP1R1BQ9UD71 204 aaPredicted RBP12.39□□□□□ -0.43
VIL1-201ENST00000248444 GBP4Q96PP9 640 aa12.38□□□□□ -0.43
VIL1-201ENST00000248444 CDK19Q9BWU1 502 aa12.38□□□□□ -0.43
VIL1-201ENST00000248444 COG6Q9Y2V7 657 aa12.38□□□□□ -0.43
VIL1-201ENST00000248444 TROQ12816 1431 aaPredicted RBP12.38□□□□□ -0.43
VIL1-201ENST00000248444 APPP05067 770 aa12.38□□□□□ -0.43
VIL1-201ENST00000248444 ARAP1Q96P48 1450 aa12.38□□□□□ -0.43
VIL1-201ENST00000248444 KIF16BQ96L93 1317 aa12.38□□□□□ -0.43
VIL1-201ENST00000248444 GNAI1P63096 354 aa12.37□□□□□ -0.43
VIL1-201ENST00000248444 G3BP1Q13283 466 aaKnown RBP eCLIP12.37□□□□□ -0.434e-8■■□□□ 12.2
VIL1-201ENST00000248444 TOM1L2Q6ZVM7 507 aa12.37□□□□□ -0.43
VIL1-201ENST00000248444 SMG6Q86US8 1419 aaKnown RBP12.37□□□□□ -0.43
VIL1-201ENST00000248444 LRRFIP1Q32MZ4 808 aaKnown RBP12.37□□□□□ -0.43
VIL1-201ENST00000248444 ERICH6BQ5W0A0 696 aa12.37□□□□□ -0.43
VIL1-201ENST00000248444 DIAPH3Q9NSV4 1193 aa12.37□□□□□ -0.43
VIL1-201ENST00000248444 API5Q9BZZ5 524 aaKnown RBP12.37□□□□□ -0.43
VIL1-201ENST00000248444 SLC52A1Q9NWF4 448 aa12.37□□□□□ -0.43
VIL1-201ENST00000248444 CREBRFQ8IUR6 639 aa12.37□□□□□ -0.43
VIL1-201ENST00000248444 AKAP17AQ02040 695 aaKnown RBP12.36□□□□□ -0.43
VIL1-201ENST00000248444 KIAA2012Q0VF49 1180 aa12.36□□□□□ -0.43
VIL1-201ENST00000248444 PLEKHO1Q53GL0 409 aaPredicted RBP12.36□□□□□ -0.43
VIL1-201ENST00000248444 XPCQ01831 940 aaPredicted RBP12.36□□□□□ -0.43
VIL1-201ENST00000248444 CCDC34Q96HJ3 373 aa12.36□□□□□ -0.43
VIL1-201ENST00000248444 LAMC3Q9Y6N6 1575 aa12.36□□□□□ -0.43
VIL1-201ENST00000248444 TATP17735 454 aaPredicted RBP12.36□□□□□ -0.43
VIL1-201ENST00000248444 DDX54Q8TDD1 881 aaKnown RBP12.36□□□□□ -0.43
VIL1-201ENST00000248444 GLIPR1L2Q4G1C9 344 aa12.35□□□□□ -0.43
VIL1-201ENST00000248444 KIF7Q2M1P5 1343 aa12.35□□□□□ -0.43
VIL1-201ENST00000248444 SYNE3Q6ZMZ3 975 aa12.35□□□□□ -0.43
VIL1-201ENST00000248444 FOXD4L5Q5VV16 416 aaPredicted RBP12.35□□□□□ -0.43
VIL1-201ENST00000248444 FOXD4L4Q8WXT5 416 aaPredicted RBP12.35□□□□□ -0.43
VIL1-201ENST00000248444 CD109Q6YHK3 1445 aa12.35□□□□□ -0.43
VIL1-201ENST00000248444 ST18O60284 1047 aa12.35□□□□□ -0.43
VIL1-201ENST00000248444 MTHFSP49914 203 aa12.35□□□□□ -0.43
VIL1-201ENST00000248444 CWC22Q9HCG8 908 aaKnown RBP12.34□□□□□ -0.43
VIL1-201ENST00000248444 CABP1Q9NZU7 370 aa12.34□□□□□ -0.43
VIL1-201ENST00000248444 CHAF1AQ13111 956 aaPredicted RBP12.34□□□□□ -0.43
VIL1-201ENST00000248444 CRBNQ96SW2 442 aa12.34□□□□□ -0.43
VIL1-201ENST00000248444 KIAA0586Q9BVV6 1533 aa12.34□□□□□ -0.43
VIL1-201ENST00000248444 KIF6Q6ZMV9 814 aa12.34□□□□□ -0.43
VIL1-201ENST00000248444 ERBINQ96RT1 1412 aa12.33□□□□□ -0.43
VIL1-201ENST00000248444 H3BQV1 296 aa12.33□□□□□ -0.44
VIL1-201ENST00000248444 DHX16O60231 1041 aaKnown RBP12.33□□□□□ -0.44
VIL1-201ENST00000248444 IFFO2Q5TF58 517 aa12.33□□□□□ -0.44
VIL1-201ENST00000248444 DDX19BQ9UMR2 479 aa12.33□□□□□ -0.44
VIL1-201ENST00000248444 NBPF1Q3BBV0 1214 aa12.33□□□□□ -0.44
VIL1-201ENST00000248444 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
VIL1-201ENST00000248444 DZIP1LQ8IYY4 767 aaKnown RBP12.33□□□□□ -0.44
VIL1-201ENST00000248444 GAS2L2Q8NHY3 880 aa12.33□□□□□ -0.44
VIL1-201ENST00000248444 NEUROD6Q96NK8 337 aa12.33□□□□□ -0.44
VIL1-201ENST00000248444 GZF1Q9H116 711 aaPredicted RBP12.33□□□□□ -0.44
VIL1-201ENST00000248444 TCEAL9Q9UHQ7 104 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms