RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 PLEKHH1Q9ULM0 1364 aa33.81■■■■□ 3
RAB40C-201ENST00000248139 KANK1Q14678 1352 aa33.81■■■■□ 3
RAB40C-201ENST00000248139 ATP7AQ04656 1500 aa33.8■■■■□ 3
RAB40C-201ENST00000248139 NBR1Q14596 966 aa33.79■■■■□ 3
RAB40C-201ENST00000248139 ANP32AP39687 249 aaKnown RBP33.78■■■■□ 3
RAB40C-201ENST00000248139 CEP152O94986 1710 aa33.78■■■■□ 3
RAB40C-201ENST00000248139 CHGAP10645 457 aaKnown RBP33.77■■■■□ 3
RAB40C-201ENST00000248139 ADGRL1O94910 1474 aa33.76■■■■□ 3
RAB40C-201ENST00000248139 CDCA8Q53HL2 280 aa33.75■■■□□ 2.99
RAB40C-201ENST00000248139 ZMYM4Q5VZL5 1548 aa33.74■■■□□ 2.99
RAB40C-201ENST00000248139 IPO9Q96P70 1041 aaKnown RBP33.72■■■□□ 2.99
RAB40C-201ENST00000248139 DEPDC5O75140 1603 aa33.72■■■□□ 2.99
RAB40C-201ENST00000248139 TET3O43151 1660 aa33.72■■■□□ 2.99
RAB40C-201ENST00000248139 DUSP27Q5VZP5 1158 aa33.69■■■□□ 2.98
RAB40C-201ENST00000248139 INO80Q9ULG1 1556 aaPredicted RBP33.68■■■□□ 2.98
RAB40C-201ENST00000248139 PDE4AP27815 886 aa33.68■■■□□ 2.98
RAB40C-201ENST00000248139 CARD14Q9BXL6 1004 aa33.68■■■□□ 2.98
RAB40C-201ENST00000248139 ASXL1Q8IXJ9 1541 aa33.67■■■□□ 2.98
RAB40C-201ENST00000248139 ARAP3Q8WWN8 1544 aa33.67■■■□□ 2.98
RAB40C-201ENST00000248139 ABCA9Q8IUA7 1624 aa33.66■■■□□ 2.98
RAB40C-201ENST00000248139 INSRP06213 1382 aa33.65■■■□□ 2.98
RAB40C-201ENST00000248139 TCERG1O14776 1098 aaKnown RBP33.65■■■□□ 2.98
RAB40C-201ENST00000248139 SPINK5Q9NQ38 1064 aaPredicted RBP33.65■■■□□ 2.98
RAB40C-201ENST00000248139 SYNMO15061 1565 aa33.65■■■□□ 2.98
RAB40C-201ENST00000248139 ASXL2Q76L83 1435 aa33.65■■■□□ 2.98
RAB40C-201ENST00000248139 EIF3AQ14152 1382 aaKnown RBP33.64■■■□□ 2.98
RAB40C-201ENST00000248139 APAF1O14727 1248 aa33.64■■■□□ 2.98
RAB40C-201ENST00000248139 MYOM1P52179 1685 aa33.64■■■□□ 2.98
RAB40C-201ENST00000248139 GOLGA2Q08379 1002 aa33.63■■■□□ 2.97
RAB40C-201ENST00000248139 STAC3Q96MF2 364 aa33.63■■■□□ 2.97
RAB40C-201ENST00000248139 ZBTB47Q9UFB7 747 aaPredicted RBP33.63■■■□□ 2.97
RAB40C-201ENST00000248139 CFAP65Q6ZU64 1925 aaKnown RBP33.63■■■□□ 2.97
RAB40C-201ENST00000248139 GGT6Q6P531 493 aa33.63■■■□□ 2.97
RAB40C-201ENST00000248139 VWDEQ8N2E2 1590 aa33.63■■■□□ 2.97
RAB40C-201ENST00000248139 SENP3Q9H4L4 574 aaPredicted RBP33.62■■■□□ 2.97
RAB40C-201ENST00000248139 MROH1Q8NDA8 1641 aa33.62■■■□□ 2.97
RAB40C-201ENST00000248139 TRAK1Q9UPV9 953 aa33.61■■■□□ 2.97
RAB40C-201ENST00000248139 ZNF521Q96K83 1311 aa33.6■■■□□ 2.97
RAB40C-201ENST00000248139 TNNT2P45379 298 aaPredicted RBP33.59■■■□□ 2.97
RAB40C-201ENST00000248139 ERVK-7P63135 1459 aa33.59■■■□□ 2.97
RAB40C-201ENST00000248139 ABCA6Q8N139 1617 aa33.58■■■□□ 2.97
RAB40C-201ENST00000248139 NUTM2DQ5VT03 806 aaPredicted RBP33.57■■■□□ 2.97
RAB40C-201ENST00000248139 TMEM132EQ6IEE7 984 aa33.57■■■□□ 2.97
RAB40C-201ENST00000248139 BACH2Q9BYV9 841 aa33.57■■■□□ 2.96
RAB40C-201ENST00000248139 BCL11AQ9H165 835 aa33.56■■■□□ 2.96
RAB40C-201ENST00000248139 DMRT2Q9Y5R5 561 aa33.56■■■□□ 2.96
RAB40C-201ENST00000248139 MAP3K4Q9Y6R4 1608 aa33.55■■■□□ 2.96
RAB40C-201ENST00000248139 NOS1P29475 1434 aa33.54■■■□□ 2.96
RAB40C-201ENST00000248139 SLFN5Q08AF3 891 aa33.54■■■□□ 2.96
RAB40C-201ENST00000248139 PIK3C2GO75747 1445 aa33.53■■■□□ 2.96
RAB40C-201ENST00000248139 KDM5AP29375 1690 aaKnown RBP33.53■■■□□ 2.96
RAB40C-201ENST00000248139 MROH2AA6NES4 1674 aa33.52■■■□□ 2.96
RAB40C-201ENST00000248139 KIDINS220Q9ULH0 1771 aa33.51■■■□□ 2.96
RAB40C-201ENST00000248139 PPRC1Q5VV67 1664 aaKnown RBP33.5■■■□□ 2.95
RAB40C-201ENST00000248139 SLC12A5Q9H2X9 1139 aa33.49■■■□□ 2.95
RAB40C-201ENST00000248139 EFCAB6Q5THR3 1501 aa33.49■■■□□ 2.95
RAB40C-201ENST00000248139 BCAR3O75815 825 aa33.48■■■□□ 2.95
RAB40C-201ENST00000248139 KIF1BO60333 1816 aa33.48■■■□□ 2.95
RAB40C-201ENST00000248139 CENPJQ9HC77 1338 aaPredicted RBP33.46■■■□□ 2.95
RAB40C-201ENST00000248139 DEKP35659 375 aaKnown RBP33.46■■■□□ 2.95
RAB40C-201ENST00000248139 MYOM2P54296 1465 aa33.46■■■□□ 2.95
RAB40C-201ENST00000248139 NPC1L1Q9UHC9 1359 aa33.45■■■□□ 2.95
RAB40C-201ENST00000248139 NEUROD2Q15784 382 aa33.45■■■□□ 2.95
RAB40C-201ENST00000248139 MS4A1P11836 297 aa33.45■■■□□ 2.94
RAB40C-201ENST00000248139 NPM1P06748 294 aaKnown RBP eCLIP33.44■■■□□ 2.94
RAB40C-201ENST00000248139 KIAA1210Q9ULL0 1709 aa33.44■■■□□ 2.94
RAB40C-201ENST00000248139 KDM2BQ8NHM5 1336 aa33.41■■■□□ 2.94
RAB40C-201ENST00000248139 RRP7AQ9Y3A4 280 aaKnown RBP33.4■■■□□ 2.94
RAB40C-201ENST00000248139 NPATQ14207 1427 aa33.4■■■□□ 2.94
RAB40C-201ENST00000248139 TRMT2AQ8IZ69 625 aaKnown RBP33.39■■■□□ 2.94
RAB40C-201ENST00000248139 RAPGEF3O95398 923 aa33.39■■■□□ 2.94
RAB40C-201ENST00000248139 LAS1LQ9Y4W2 734 aaKnown RBP33.39■■■□□ 2.94
RAB40C-201ENST00000248139 ZNF518AQ6AHZ1 1483 aa33.38■■■□□ 2.93
RAB40C-201ENST00000248139 MORC1Q86VD1 984 aa33.37■■■□□ 2.93
RAB40C-201ENST00000248139 NSD3Q9BZ95 1437 aa33.37■■■□□ 2.93
RAB40C-201ENST00000248139 SAFB2Q14151 953 aaKnown RBP eCLIP33.36■■■□□ 2.93
RAB40C-201ENST00000248139 IFT172Q9UG01 1749 aa33.35■■■□□ 2.93
RAB40C-201ENST00000248139 CD109Q6YHK3 1445 aa33.35■■■□□ 2.93
RAB40C-201ENST00000248139 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.35■■■□□ 2.93
RAB40C-201ENST00000248139 C14orf93Q9H972 538 aaKnown RBP33.34■■■□□ 2.93
RAB40C-201ENST00000248139 RGS3P49796 1198 aa33.33■■■□□ 2.93
RAB40C-201ENST00000248139 NRXN1Q9ULB1 1477 aa33.32■■■□□ 2.92
RAB40C-201ENST00000248139 CENPQQ7L2Z9 268 aaPredicted RBP33.31■■■□□ 2.92
RAB40C-201ENST00000248139 NEURL4Q96JN8 1562 aa33.31■■■□□ 2.92
RAB40C-201ENST00000248139 SLC24A1O60721 1099 aa33.3■■■□□ 2.92
RAB40C-201ENST00000248139 ADGRB3O60242 1522 aa33.3■■■□□ 2.92
RAB40C-201ENST00000248139 NKTRP30414 1462 aaKnown RBP33.3■■■□□ 2.92
RAB40C-201ENST00000248139 E9PSI1 815 aa33.3■■■□□ 2.92
RAB40C-201ENST00000248139 WWC1Q8IX03 1113 aa33.29■■■□□ 2.92
RAB40C-201ENST00000248139 FRMPD1Q5SYB0 1578 aa33.28■■■□□ 2.92
RAB40C-201ENST00000248139 SLC4A3P48751 1232 aa33.26■■■□□ 2.91
RAB40C-201ENST00000248139 POGZQ7Z3K3 1410 aa33.26■■■□□ 2.91
RAB40C-201ENST00000248139 LMTK2Q8IWU2 1503 aa33.25■■■□□ 2.91
RAB40C-201ENST00000248139 MTHFSP49914 203 aa33.24■■■□□ 2.91
RAB40C-201ENST00000248139 SBNO2Q9Y2G9 1366 aa33.23■■■□□ 2.91
RAB40C-201ENST00000248139 RTL5Q5HYW3 569 aaPredicted RBP33.23■■■□□ 2.91
RAB40C-201ENST00000248139 PANK1Q8TE04 598 aa33.23■■■□□ 2.91
RAB40C-201ENST00000248139 CABP2Q9NPB3 220 aa33.22■■■□□ 2.91
RAB40C-201ENST00000248139 STK26Q9P289 416 aa33.22■■■□□ 2.91
RAB40C-201ENST00000248139 POLR3AO14802 1390 aaPredicted RBP33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms