RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 KIF3BO15066 747 aa28.8■■■□□ 2.2
SH2D3A-201ENST00000245908 EIF3AQ14152 1382 aaKnown RBP28.8■■■□□ 2.2
SH2D3A-201ENST00000245908 MYOM2P54296 1465 aa28.79■■■□□ 2.2
SH2D3A-201ENST00000245908 MAP3K4Q9Y6R4 1608 aa28.78■■■□□ 2.2
SH2D3A-201ENST00000245908 KNSTRNQ9Y448 316 aa28.78■■■□□ 2.2
SH2D3A-201ENST00000245908 EFCAB6Q5THR3 1501 aa28.77■■■□□ 2.2
SH2D3A-201ENST00000245908 ASXL2Q76L83 1435 aa28.77■■■□□ 2.2
SH2D3A-201ENST00000245908 CDCA7LQ96GN5 454 aa28.77■■■□□ 2.2
SH2D3A-201ENST00000245908 KIF1BO60333 1816 aa28.77■■■□□ 2.2
SH2D3A-201ENST00000245908 KIDINS220Q9ULH0 1771 aa28.76■■■□□ 2.2
SH2D3A-201ENST00000245908 AMER1Q5JTC6 1135 aaPredicted RBP28.76■■■□□ 2.19
SH2D3A-201ENST00000245908 IFT172Q9UG01 1749 aa28.76■■■□□ 2.19
SH2D3A-201ENST00000245908 ASXL1Q8IXJ9 1541 aa28.76■■■□□ 2.19
SH2D3A-201ENST00000245908 KDM5AP29375 1690 aaKnown RBP28.76■■■□□ 2.19
SH2D3A-201ENST00000245908 ERICH6Q7L0X2 663 aa28.75■■■□□ 2.19
SH2D3A-201ENST00000245908 ABCA6Q8N139 1617 aa28.75■■■□□ 2.19
SH2D3A-201ENST00000245908 EXOC6Q8TAG9 804 aa28.74■■■□□ 2.19
SH2D3A-201ENST00000245908 PPP2R1AP30153 589 aa28.74■■■□□ 2.19
SH2D3A-201ENST00000245908 UGGT1Q9NYU2 1555 aa28.73■■■□□ 2.19
SH2D3A-201ENST00000245908 NPC1L1Q9UHC9 1359 aa28.73■■■□□ 2.19
SH2D3A-201ENST00000245908 LMTK2Q8IWU2 1503 aa28.72■■■□□ 2.19
SH2D3A-201ENST00000245908 PPRC1Q5VV67 1664 aaKnown RBP28.71■■■□□ 2.19
SH2D3A-201ENST00000245908 PIK3C2GO75747 1445 aa28.7■■■□□ 2.18
SH2D3A-201ENST00000245908 ADAMTS8Q9UP79 889 aa28.69■■■□□ 2.18
SH2D3A-201ENST00000245908 MROH2AA6NES4 1674 aa28.69■■■□□ 2.18
SH2D3A-201ENST00000245908 ZNF518AQ6AHZ1 1483 aa28.67■■■□□ 2.18
SH2D3A-201ENST00000245908 SLC24A1O60721 1099 aa28.66■■■□□ 2.18
SH2D3A-201ENST00000245908 NRXN1Q9ULB1 1477 aa28.66■■■□□ 2.18
SH2D3A-201ENST00000245908 ERVK-7P63135 1459 aa28.65■■■□□ 2.18
SH2D3A-201ENST00000245908 MYO3AQ8NEV4 1616 aa28.64■■■□□ 2.18
SH2D3A-201ENST00000245908 WDR43Q15061 677 aaKnown RBP eCLIP28.63■■■□□ 2.17
SH2D3A-201ENST00000245908 CFAP70Q5T0N1 1121 aa28.63■■■□□ 2.17
SH2D3A-201ENST00000245908 ADGRF5Q8IZF2 1346 aa28.63■■■□□ 2.17
SH2D3A-201ENST00000245908 ADGRB3O60242 1522 aa28.62■■■□□ 2.17
SH2D3A-201ENST00000245908 CFAP74Q9C0B2 1584 aa28.61■■■□□ 2.17
SH2D3A-201ENST00000245908 PLEKHH1Q9ULM0 1364 aa28.59■■■□□ 2.17
SH2D3A-201ENST00000245908 SETBP1Q9Y6X0 1596 aa28.58■■■□□ 2.17
SH2D3A-201ENST00000245908 ZNF521Q96K83 1311 aa28.57■■■□□ 2.16
SH2D3A-201ENST00000245908 SBNO2Q9Y2G9 1366 aa28.57■■■□□ 2.16
SH2D3A-201ENST00000245908 TCERG1O14776 1098 aaKnown RBP28.55■■■□□ 2.16
SH2D3A-201ENST00000245908 POGZQ7Z3K3 1410 aa28.55■■■□□ 2.16
SH2D3A-201ENST00000245908 PLIN1O60240 522 aa28.54■■■□□ 2.16
SH2D3A-201ENST00000245908 FRMPD1Q5SYB0 1578 aa28.54■■■□□ 2.16
SH2D3A-201ENST00000245908 NOP58Q9Y2X3 529 aaKnown RBP28.54■■■□□ 2.16
SH2D3A-201ENST00000245908 MLH3Q9UHC1 1453 aa28.53■■■□□ 2.16
SH2D3A-201ENST00000245908 PPLO60437 1756 aa28.52■■■□□ 2.16
SH2D3A-201ENST00000245908 ANP32AP39687 249 aaKnown RBP28.52■■■□□ 2.16
SH2D3A-201ENST00000245908 DUSP27Q5VZP5 1158 aa28.52■■■□□ 2.16
SH2D3A-201ENST00000245908 NOS1P29475 1434 aa28.52■■■□□ 2.16
SH2D3A-201ENST00000245908 HECW2Q9P2P5 1572 aa28.51■■■□□ 2.15
SH2D3A-201ENST00000245908 CRBNQ96SW2 442 aa28.5■■■□□ 2.15
SH2D3A-201ENST00000245908 NPATQ14207 1427 aa28.5■■■□□ 2.15
SH2D3A-201ENST00000245908 ZC3H13Q5T200 1668 aaKnown RBP28.49■■■□□ 2.15
SH2D3A-201ENST00000245908 CD109Q6YHK3 1445 aa28.49■■■□□ 2.15
SH2D3A-201ENST00000245908 GOLGA2Q08379 1002 aa28.48■■■□□ 2.15
SH2D3A-201ENST00000245908 NPM1P06748 294 aaKnown RBP eCLIP28.48■■■□□ 2.15
SH2D3A-201ENST00000245908 IPO9Q96P70 1041 aaKnown RBP28.47■■■□□ 2.15
SH2D3A-201ENST00000245908 MS4A1P11836 297 aa28.46■■■□□ 2.15
SH2D3A-201ENST00000245908 CARD14Q9BXL6 1004 aa28.46■■■□□ 2.15
SH2D3A-201ENST00000245908 DEKP35659 375 aaKnown RBP28.46■■■□□ 2.15
SH2D3A-201ENST00000245908 CENPJQ9HC77 1338 aaPredicted RBP28.44■■■□□ 2.14
SH2D3A-201ENST00000245908 ADGRB1O14514 1584 aa28.43■■■□□ 2.14
SH2D3A-201ENST00000245908 SLFN5Q08AF3 891 aa28.43■■■□□ 2.14
SH2D3A-201ENST00000245908 QRICH2Q9H0J4 1663 aa28.42■■■□□ 2.14
SH2D3A-201ENST00000245908 ABCC3O15438 1527 aa28.42■■■□□ 2.14
SH2D3A-201ENST00000245908 PAK3O75914 559 aaPredicted RBP28.42■■■□□ 2.14
SH2D3A-201ENST00000245908 TRMT2AQ8IZ69 625 aaKnown RBP28.41■■■□□ 2.14
SH2D3A-201ENST00000245908 CFAP65Q6ZU64 1925 aaKnown RBP28.41■■■□□ 2.14
SH2D3A-201ENST00000245908 C14orf93Q9H972 538 aaKnown RBP28.4■■■□□ 2.14
SH2D3A-201ENST00000245908 C20orf194Q5TEA3 1177 aa28.4■■■□□ 2.14
SH2D3A-201ENST00000245908 CHGAP10645 457 aaKnown RBP28.39■■■□□ 2.13
SH2D3A-201ENST00000245908 PDE4AP27815 886 aa28.39■■■□□ 2.13
SH2D3A-201ENST00000245908 CAMSAP1Q5T5Y3 1602 aa28.38■■■□□ 2.13
SH2D3A-201ENST00000245908 RPGRIP1LQ68CZ1 1315 aa28.38■■■□□ 2.13
SH2D3A-201ENST00000245908 CCDC146Q8IYE0 955 aa28.38■■■□□ 2.13
SH2D3A-201ENST00000245908 BACH2Q9BYV9 841 aa28.37■■■□□ 2.13
SH2D3A-201ENST00000245908 POLR3AO14802 1390 aaPredicted RBP28.36■■■□□ 2.13
SH2D3A-201ENST00000245908 GGT6Q6P531 493 aa28.36■■■□□ 2.13
SH2D3A-201ENST00000245908 NGEFQ8N5V2 710 aa28.36■■■□□ 2.13
SH2D3A-201ENST00000245908 APAF1O14727 1248 aa28.35■■■□□ 2.13
SH2D3A-201ENST00000245908 OSCARQ8IYS5 282 aa28.35■■■□□ 2.13
SH2D3A-201ENST00000245908 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.35■■■□□ 2.13
SH2D3A-201ENST00000245908 PIK3C2BO00750 1634 aa28.35■■■□□ 2.13
SH2D3A-201ENST00000245908 SIGLEC1Q9BZZ2 1709 aa28.34■■■□□ 2.13
SH2D3A-201ENST00000245908 NKTRP30414 1462 aaKnown RBP28.34■■■□□ 2.13
SH2D3A-201ENST00000245908 USP32Q8NFA0 1604 aa28.33■■■□□ 2.13
SH2D3A-201ENST00000245908 NEO1Q92859 1461 aa28.33■■■□□ 2.13
SH2D3A-201ENST00000245908 KDM2BQ8NHM5 1336 aa28.33■■■□□ 2.13
SH2D3A-201ENST00000245908 NSD3Q9BZ95 1437 aa28.33■■■□□ 2.13
SH2D3A-201ENST00000245908 TRAK1Q9UPV9 953 aa28.32■■■□□ 2.12
SH2D3A-201ENST00000245908 PRKCSHP14314 528 aaPredicted RBP28.32■■■□□ 2.12
SH2D3A-201ENST00000245908 ZBTB47Q9UFB7 747 aaPredicted RBP28.32■■■□□ 2.12
SH2D3A-201ENST00000245908 SHPRHQ149N8 1683 aa28.31■■■□□ 2.12
SH2D3A-201ENST00000245908 GLI2P10070 1586 aa28.29■■■□□ 2.12
SH2D3A-201ENST00000245908 E9PSI1 815 aa28.29■■■□□ 2.12
SH2D3A-201ENST00000245908 SPINK5Q9NQ38 1064 aaPredicted RBP28.29■■■□□ 2.12
SH2D3A-201ENST00000245908 DIP2CQ9Y2E4 1556 aa28.28■■■□□ 2.12
SH2D3A-201ENST00000245908 CENPQQ7L2Z9 268 aaPredicted RBP28.27■■■□□ 2.12
SH2D3A-201ENST00000245908 NEXMIFQ5QGS0 1516 aa28.26■■■□□ 2.12
SH2D3A-201ENST00000245908 ARHGEF28Q8N1W1 1705 aaKnown RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms